RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ZNF417Q8TAU3 575 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 PIK3R5Q8WYR1 880 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 DCAF5Q96JK2 942 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 ZNF587Q96SQ5 575 aaPredicted RBP6.65□□□□□ -1.35
CLK1-204ENST00000432425 MTMR7Q9Y216 660 aa6.65□□□□□ -1.35
CLK1-204ENST00000432425 EGFRP00533 1210 aa6.64□□□□□ -1.35
CLK1-204ENST00000432425 TARSP26639 723 aaKnown RBP6.64□□□□□ -1.35
CLK1-204ENST00000432425 ZAP70P43403 619 aa6.64□□□□□ -1.35
CLK1-204ENST00000432425 KRTAP9-2Q9BYQ4 174 aa6.64□□□□□ -1.35
CLK1-204ENST00000432425 STARD13Q9Y3M8 1113 aa6.64□□□□□ -1.35
CLK1-204ENST00000432425 CARNS1A5YM72 827 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 ALBP02768 609 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 FAM26DQ5JW98 314 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 B4GALNT3Q6L9W6 998 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 DHX32Q7L7V1 743 aaKnown RBP6.63□□□□□ -1.35
CLK1-204ENST00000432425 MICALL1Q8N3F8 863 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 HELQQ8TDG4 1101 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 SUV39H2Q9H5I1 410 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 ZFATQ9P243 1243 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 KCNMB2Q9Y691 235 aa6.63□□□□□ -1.35
CLK1-204ENST00000432425 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
CLK1-204ENST00000432425 SPDYE3A6NKU9 549 aa6.62□□□□□ -1.35
CLK1-204ENST00000432425 SCNN1AP37088 669 aa6.62□□□□□ -1.35
CLK1-204ENST00000432425 UBAP1LF5GYI3 381 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 COL8A1P27658 744 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 FAM35AQ86V20 835 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 GPR152Q8TDT2 470 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 GTF3C2Q8WUA4 911 aaPredicted RBP6.61□□□□□ -1.35
CLK1-204ENST00000432425 PLVAPQ9BX97 442 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 PRDM6Q9NQX0 595 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 FNDC3AQ9Y2H6 1198 aaKnown RBP6.61□□□□□ -1.35
CLK1-204ENST00000432425 LILRB5O75023 590 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 PSAPP07602 524 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 CPB1P15086 417 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 PSAPL1Q6NUJ1 521 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 C8orf86Q6ZUL3 223 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 TRIM11Q96F44 468 aa6.61□□□□□ -1.35
CLK1-204ENST00000432425 JPH1Q9HDC5 661 aaPredicted RBP6.61□□□□□ -1.35
CLK1-204ENST00000432425 ZBTB39O15060 712 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 RGS9O75916 674 aaPredicted RBP6.6□□□□□ -1.35
CLK1-204ENST00000432425 GPLD1P80108 840 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 MLLT1Q03111 559 aaPredicted RBP6.6□□□□□ -1.35
CLK1-204ENST00000432425 PDE4CQ08493 712 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 TRIP4Q15650 581 aaPredicted RBP6.6□□□□□ -1.35
CLK1-204ENST00000432425 GPAT2Q6NUI2 795 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 C20orf204Q6ZNR8 217 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 NLRP13Q86W25 1043 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 TRPM4Q8TD43 1214 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 NUDT8Q8WV74 236 aa6.6□□□□□ -1.35
CLK1-204ENST00000432425 TLR7Q9NYK1 1049 aaKnown RBP6.6□□□□□ -1.35
CLK1-204ENST00000432425 NRLP54845 237 aa6.59□□□□□ -1.35
CLK1-204ENST00000432425 PLAURQ03405 335 aa6.59□□□□□ -1.35
CLK1-204ENST00000432425 PLA2G4EQ3MJ16 856 aa6.59□□□□□ -1.35
CLK1-204ENST00000432425 NOM1Q5C9Z4 860 aaKnown RBP6.59□□□□□ -1.35
CLK1-204ENST00000432425 NAGPAQ9UK23 515 aa6.59□□□□□ -1.35
CLK1-204ENST00000432425 MMP20O60882 483 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 IGHA1P01876 353 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 PCSK2P16519 638 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 PRRT3Q5FWE3 981 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 PHLDB3Q6NSJ2 640 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 ELMSAN1Q6PJG2 1045 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 ATCAYQ86WG3 371 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 RETREG2Q8NC44 543 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 KRBA1A5PL33 1030 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 ZBTB42B2RXF5 422 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 ABL1P00519 1130 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 RPLP1P05386 114 aaKnown RBP6.58□□□□□ -1.36
CLK1-204ENST00000432425 EIF2AK2P19525 551 aaKnown RBP6.58□□□□□ -1.36
CLK1-204ENST00000432425 MPSTP25325 297 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 ALKBH2Q6NS38 261 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 NUDT16Q96DE0 195 aaKnown RBP6.58□□□□□ -1.36
CLK1-204ENST00000432425 FRRS1LQ9P0K9 344 aa6.58□□□□□ -1.36
CLK1-204ENST00000432425 GHRHP01286 108 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 SPATA31C1P0DKV0 1188 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 NID1P14543 1247 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 SOX18P35713 384 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 EIF1AXP47813 144 aaKnown RBP6.57□□□□□ -1.36
CLK1-204ENST00000432425 DNM1Q05193 864 aaKnown RBP6.57□□□□□ -1.36
CLK1-204ENST00000432425 SF3B2Q13435 895 aaKnown RBP6.57□□□□□ -1.36
CLK1-204ENST00000432425 MTMR3Q13615 1198 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 AAMPQ13685 434 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 PERM1Q5SV97 790 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 TRAPPC3LQ5T215 181 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 TTC39BQ5VTQ0 682 aaPredicted RBP6.57□□□□□ -1.36
CLK1-204ENST00000432425 HFE2Q6ZVN8 426 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 TTC16Q8NEE8 873 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 EDEM1Q92611 657 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 RBSNQ9H1K0 784 aa6.57□□□□□ -1.36
CLK1-204ENST00000432425 FAM13AO94988 1023 aa6.56□□□□□ -1.36
CLK1-204ENST00000432425 TRIM28Q13263 835 aaKnown RBP6.56□□□□□ -1.36
CLK1-204ENST00000432425 COL9A3Q14050 684 aaPredicted RBP6.56□□□□□ -1.36
CLK1-204ENST00000432425 NSUN5Q96P11 429 aaKnown RBP6.56□□□□□ -1.36
CLK1-204ENST00000432425 LPIN3Q9BQK8 851 aa6.56□□□□□ -1.36
CLK1-204ENST00000432425 LOC102724428A0A0B4J2F2 783 aa6.55□□□□□ -1.36
CLK1-204ENST00000432425 MSTNO14793 375 aa6.55□□□□□ -1.36
CLK1-204ENST00000432425 HOXD8P13378 290 aaPredicted RBP6.55□□□□□ -1.36
CLK1-204ENST00000432425 AFF1P51825 1210 aaKnown RBP6.55□□□□□ -1.36
CLK1-204ENST00000432425 SIK1P57059 783 aa6.55□□□□□ -1.36
CLK1-204ENST00000432425 ZNF211Q13398 564 aaPredicted RBP6.55□□□□□ -1.36
CLK1-204ENST00000432425 ZNF438Q7Z4V0 828 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms