RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 ESPNB1AK53 854 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 CHST3Q7LGC8 479 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 RAB11FIP4Q86YS3 637 aa13.54□□□□□ -0.24
CLDN4-202ENST00000431918 ZSCAN22P10073 491 aaPredicted RBP13.53□□□□□ -0.24
CLDN4-202ENST00000431918 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 TRDNQ13061 729 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
CLDN4-202ENST00000431918 KIF3AQ9Y496 699 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 BRF1Q92994 677 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
CLDN4-202ENST00000431918 NEK1Q96PY6 1258 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 ASAP1Q9ULH1 1129 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 CCDC173Q0VFZ6 552 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 KRT32Q14532 448 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
CLDN4-202ENST00000431918 SLC27A2O14975 620 aa13.52□□□□□ -0.24
CLDN4-202ENST00000431918 KRT85P78386 507 aa13.52□□□□□ -0.24
CLDN4-202ENST00000431918 DNM1Q05193 864 aaKnown RBP13.52□□□□□ -0.24
CLDN4-202ENST00000431918 BICDL1Q6ZP65 573 aa13.52□□□□□ -0.24
CLDN4-202ENST00000431918 IL15P40933 162 aaPredicted RBP13.52□□□□□ -0.25
CLDN4-202ENST00000431918 RUFY3Q7L099 469 aa13.52□□□□□ -0.25
CLDN4-202ENST00000431918 HELBQ8NG08 1087 aaPredicted RBP13.52□□□□□ -0.25
CLDN4-202ENST00000431918 MPHOSPH8Q99549 860 aa13.52□□□□□ -0.25
CLDN4-202ENST00000431918 CAMK4Q16566 473 aa13.52□□□□□ -0.25
CLDN4-202ENST00000431918 LRRC24Q50LG9 513 aa13.52□□□□□ -0.25
CLDN4-202ENST00000431918 PAG1Q9NWQ8 432 aa13.52□□□□□ -0.25
CLDN4-202ENST00000431918 WDR17Q8IZU2 1322 aa13.52□□□□□ -0.25
CLDN4-202ENST00000431918 MCMDC2Q4G0Z9 681 aa13.51□□□□□ -0.25
CLDN4-202ENST00000431918 A0A1B0GUL7 405 aa13.51□□□□□ -0.25
CLDN4-202ENST00000431918 U3KPZ7 1027 aaPredicted RBP13.51□□□□□ -0.25
CLDN4-202ENST00000431918 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
CLDN4-202ENST00000431918 PDIA6Q15084 440 aa13.51□□□□□ -0.25
CLDN4-202ENST00000431918 PTPN12Q05209 780 aaKnown RBP13.5□□□□□ -0.25
CLDN4-202ENST00000431918 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 ZNF589Q86UQ0 364 aaPredicted RBP13.5□□□□□ -0.25
CLDN4-202ENST00000431918 PUS3Q9BZE2 481 aaKnown RBP13.5□□□□□ -0.25
CLDN4-202ENST00000431918 PDCL3Q9H2J4 239 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 BRD1O95696 1058 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 MTX1Q13505 466 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 SLFNL1Q499Z3 407 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 RRP12Q5JTH9 1297 aaKnown RBP13.5□□□□□ -0.25
CLDN4-202ENST00000431918 VPS53Q5VIR6 699 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 EYA2O00167 538 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 KIAA2012Q0VF49 1180 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 Q6ZUG5 572 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 BBXQ8WY36 941 aaPredicted RBP13.5□□□□□ -0.25
CLDN4-202ENST00000431918 AKAP2Q9Y2D5 859 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 AK9Q5TCS8 1911 aa13.5□□□□□ -0.25
CLDN4-202ENST00000431918 LARGE1O95461 756 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 F13A1P00488 732 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 VPS37DQ86XT2 251 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 SPATA32Q96LK8 384 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 TMEM63CQ9P1W3 806 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 CHGBP05060 677 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 COPRSQ9NQ92 184 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 FAM13BQ9NYF5 915 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 ANKRD18BA2A2Z9 1011 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 ME3Q16798 604 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 GPT2Q8TD30 523 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 KAZALD1Q96I82 304 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 ZDHHC9Q9Y397 364 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 NBPF14Q5TI25 921 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
CLDN4-202ENST00000431918 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 RBSNQ9H1K0 784 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 SALL3Q9BXA9 1300 aa13.49□□□□□ -0.25
CLDN4-202ENST00000431918 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
CLDN4-202ENST00000431918 ATP2B3Q16720 1220 aa13.48□□□□□ -0.25
CLDN4-202ENST00000431918 GIMAP6Q6P9H5 292 aa13.48□□□□□ -0.25
CLDN4-202ENST00000431918 NSFL1CQ9UNZ2 370 aaKnown RBP13.48□□□□□ -0.25
CLDN4-202ENST00000431918 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
CLDN4-202ENST00000431918 FSD2A1L4K1 749 aa13.48□□□□□ -0.25
CLDN4-202ENST00000431918 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLDN4-202ENST00000431918 HMG20BQ9P0W2 317 aa13.48□□□□□ -0.25
CLDN4-202ENST00000431918 TNS3Q68CZ2 1445 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 ATP5JP18859 108 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 CLCN1P35523 988 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 IQSEC3Q9UPP2 1182 aaPredicted RBP13.47□□□□□ -0.25
CLDN4-202ENST00000431918 HEG1Q9ULI3 1381 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 DDIT3P35638 169 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 CUL4AQ13619 759 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 DZIP3Q86Y13 1208 aaKnown RBP13.47□□□□□ -0.25
CLDN4-202ENST00000431918 CARD10Q9BWT7 1032 aa13.47□□□□□ -0.25
CLDN4-202ENST00000431918 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
CLDN4-202ENST00000431918 IMMTQ16891 758 aaKnown RBP13.46□□□□□ -0.25
CLDN4-202ENST00000431918 CKAP2LQ8IYA6 745 aa13.46□□□□□ -0.25
CLDN4-202ENST00000431918 TPCN1Q9ULQ1 816 aa13.46□□□□□ -0.25
CLDN4-202ENST00000431918 IRS4O14654 1257 aaPredicted RBP13.46□□□□□ -0.25
CLDN4-202ENST00000431918 TPM2P07951 284 aa13.46□□□□□ -0.25
CLDN4-202ENST00000431918 RPS6KB1P23443 525 aa13.46□□□□□ -0.26
CLDN4-202ENST00000431918 APOBRQ0VD83 1088 aa13.46□□□□□ -0.26
CLDN4-202ENST00000431918 SYNE4Q8N205 404 aa13.46□□□□□ -0.26
CLDN4-202ENST00000431918 KBTBD3Q8NAB2 608 aa13.46□□□□□ -0.26
CLDN4-202ENST00000431918 ABCF2Q9UG63 623 aa13.46□□□□□ -0.26
CLDN4-202ENST00000431918 USP25Q9UHP3 1055 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms