RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 BRCA1P38398 1863 aaKnown RBP13.76□□□□□ -0.21
CHD4-202ENST00000430771 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
CHD4-202ENST00000430771 CRY2Q49AN0 593 aa13.75□□□□□ -0.21
CHD4-202ENST00000430771 C1orf115Q9H7X2 142 aa13.75□□□□□ -0.21
CHD4-202ENST00000430771 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
CHD4-202ENST00000430771 H0YIN7 160 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 NPR1P16066 1061 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 TGFB2P61812 414 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 FOXO4P98177 505 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 MTX1Q13505 466 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 FAM161AQ3B820 660 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 DDX46Q7L014 1031 aaKnown RBP13.74□□□□□ -0.21
CHD4-202ENST00000430771 C2CD5Q86YS7 1000 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 ANKRD44Q8N8A2 993 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 TTLL11Q8NHH1 800 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 EXOC6Q8TAG9 804 aa13.74□□□□□ -0.21
CHD4-202ENST00000430771 RBM17Q96I25 401 aaKnown RBP13.74□□□□□ -0.21
CHD4-202ENST00000430771 SRCAPQ6ZRS2 3230 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 LRRC37AA6NMS7 1700 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 HMMRO75330 724 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 CSF1RP07333 972 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 EPHA10Q5JZY3 1008 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 LMBR1LQ6UX01 489 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 C3orf67Q6ZVT6 689 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 MASTLQ96GX5 879 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 KAZALD1Q96I82 304 aa13.73□□□□□ -0.21
CHD4-202ENST00000430771 CDC5LQ99459 802 aaKnown RBP13.73□□□□□ -0.21
CHD4-202ENST00000430771 ANKRD18BA2A2Z9 1011 aa13.72□□□□□ -0.21
CHD4-202ENST00000430771 SRGNP10124 158 aa13.72□□□□□ -0.21
CHD4-202ENST00000430771 IFIT5Q13325 482 aaKnown RBP13.72□□□□□ -0.21
CHD4-202ENST00000430771 CCDC57Q2TAC2 916 aa13.72□□□□□ -0.21
CHD4-202ENST00000430771 TAF7LQ5H9L4 462 aa13.72□□□□□ -0.21
CHD4-202ENST00000430771 STYK1Q6J9G0 422 aa13.72□□□□□ -0.21
CHD4-202ENST00000430771 CEP85Q6P2H3 762 aa13.72□□□□□ -0.21
CHD4-202ENST00000430771 RPAP2Q8IXW5 612 aaPredicted RBP13.72□□□□□ -0.21
CHD4-202ENST00000430771 CCDC85AQ96PX6 553 aaPredicted RBP13.72□□□□□ -0.21
CHD4-202ENST00000430771 GREM2Q9H772 168 aa13.72□□□□□ -0.21
CHD4-202ENST00000430771 SRGAP3O43295 1099 aa13.71□□□□□ -0.21
CHD4-202ENST00000430771 ITGA6P23229 1130 aa13.71□□□□□ -0.21
CHD4-202ENST00000430771 HOXA10P31260 410 aaPredicted RBP13.71□□□□□ -0.21
CHD4-202ENST00000430771 IGHMBP2P38935 993 aaKnown RBP13.71□□□□□ -0.21
CHD4-202ENST00000430771 GRAPQ13588 217 aa13.71□□□□□ -0.21
CHD4-202ENST00000430771 GRAPLQ8TC17 118 aaPredicted RBP13.71□□□□□ -0.21
CHD4-202ENST00000430771 CNKSR1Q969H4 720 aa13.71□□□□□ -0.21
CHD4-202ENST00000430771 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
CHD4-202ENST00000430771 FHDC1Q9C0D6 1143 aaPredicted RBP13.71□□□□□ -0.21
CHD4-202ENST00000430771 A0A1B0GUL6 1792 aa13.71□□□□□ -0.22
CHD4-202ENST00000430771 ARFGEF1Q9Y6D6 1849 aa13.7□□□□□ -0.22
CHD4-202ENST00000430771 CHRNA5P30532 468 aa13.7□□□□□ -0.22
CHD4-202ENST00000430771 ALDH1B1P30837 517 aa13.7□□□□□ -0.22
CHD4-202ENST00000430771 ERICH6BQ5W0A0 696 aa13.7□□□□□ -0.22
CHD4-202ENST00000430771 TMC4Q7Z404 712 aa13.7□□□□□ -0.22
CHD4-202ENST00000430771 ANKRD18AQ8IVF6 992 aa13.7□□□□□ -0.22
CHD4-202ENST00000430771 ZNF622Q969S3 477 aaKnown RBP eCLIP13.7□□□□□ -0.229e-13■■□□□ 11.8
CHD4-202ENST00000430771 DPEP1P16444 411 aa13.69□□□□□ -0.22
CHD4-202ENST00000430771 ATP8B2P98198 1209 aa13.69□□□□□ -0.22
CHD4-202ENST00000430771 TAF1P21675 1872 aa13.69□□□□□ -0.22
CHD4-202ENST00000430771 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 PPEF1O14829 653 aaPredicted RBP13.68□□□□□ -0.22
CHD4-202ENST00000430771 POLA2Q14181 598 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 SSH3Q8TE77 659 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 MPHOSPH8Q99549 860 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 SEC31BQ9NQW1 1179 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 PIM2Q9P1W9 311 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 FBXO3Q9UK99 471 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 COL4A1P02462 1669 aa13.68□□□□□ -0.22
CHD4-202ENST00000430771 SLX4Q8IY92 1834 aa13.67□□□□□ -0.22
CHD4-202ENST00000430771 A0A0G2JLW4 131 aa13.67□□□□□ -0.22
CHD4-202ENST00000430771 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
CHD4-202ENST00000430771 TTLL6Q8N841 843 aa13.67□□□□□ -0.22
CHD4-202ENST00000430771 NLGN2Q8NFZ4 835 aa13.67□□□□□ -0.22
CHD4-202ENST00000430771 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
CHD4-202ENST00000430771 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
CHD4-202ENST00000430771 COPRSQ9NQ92 184 aa13.67□□□□□ -0.22
CHD4-202ENST00000430771 BBOX1O75936 387 aa13.66□□□□□ -0.22
CHD4-202ENST00000430771 RPS8P62241 208 aaKnown RBP13.66□□□□□ -0.22
CHD4-202ENST00000430771 DALRD3Q5D0E6 543 aaKnown RBP13.66□□□□□ -0.22
CHD4-202ENST00000430771 SOGA3Q5TF21 947 aa13.66□□□□□ -0.22
CHD4-202ENST00000430771 PRPF40BQ6NWY9 871 aaKnown RBP13.66□□□□□ -0.22
CHD4-202ENST00000430771 SYT17Q9BSW7 474 aa13.66□□□□□ -0.22
CHD4-202ENST00000430771 CNNM1Q9NRU3 951 aa13.66□□□□□ -0.22
CHD4-202ENST00000430771 PCDHB15Q9Y5E8 787 aa13.66□□□□□ -0.22
CHD4-202ENST00000430771 CIAO1O76071 339 aa13.65□□□□□ -0.22
CHD4-202ENST00000430771 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
CHD4-202ENST00000430771 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
CHD4-202ENST00000430771 HDAC1Q13547 482 aaPredicted RBP13.65□□□□□ -0.22
CHD4-202ENST00000430771 HSP90AB4PQ58FF6 505 aa13.65□□□□□ -0.22
CHD4-202ENST00000430771 BSDC1Q9NW68 430 aaPredicted RBP13.65□□□□□ -0.22
CHD4-202ENST00000430771 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 EYA2O00167 538 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 KCNA3P22001 575 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 G3BP1Q13283 466 aaKnown RBP eCLIP13.64□□□□□ -0.234e-7■■□□□ 13.8
CHD4-202ENST00000430771 CC2D2BQ6DHV5 1058 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 LDHAL6AQ6ZMR3 332 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 ERC1Q8IUD2 1116 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 KLHDC4Q8TBB5 520 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 ZNF594Q96JF6 807 aaPredicted RBP13.64□□□□□ -0.23
CHD4-202ENST00000430771 SIL1Q9H173 461 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
CHD4-202ENST00000430771 PA2G4Q9UQ80 394 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms