RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 GUCY1B3Q02153 619 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 TXNDC9O14530 226 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 UBA7P41226 1012 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 CLUL1Q15846 466 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 CACYBPQ9HB71 228 aaKnown RBP18.7■□□□□ 0.58
RIF1-204ENST00000430328 BRD4O60885 1362 aaPredicted RBP18.7■□□□□ 0.58
RIF1-204ENST00000430328 HDXQ7Z353 690 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 MMRN2Q9H8L6 949 aa18.7■□□□□ 0.58
RIF1-204ENST00000430328 MYCNP04198 464 aaPredicted RBP18.69■□□□□ 0.58
RIF1-204ENST00000430328 ABCF2Q9UG63 623 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 GIPC1O14908 333 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 GBP5Q96PP8 586 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 RAB11FIP3O75154 756 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 KRT86O43790 486 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 RNF10Q8N5U6 811 aaKnown RBP18.69■□□□□ 0.58
RIF1-204ENST00000430328 CCDC94Q9BW85 323 aaPredicted RBP18.69■□□□□ 0.58
RIF1-204ENST00000430328 MORC4Q8TE76 937 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 SMIM24O75264 130 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 PPP1R7Q15435 360 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 CATIPQ7Z7H3 387 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 TRIM35Q9UPQ4 493 aa18.69■□□□□ 0.58
RIF1-204ENST00000430328 EEF2P13639 858 aaKnown RBP18.68■□□□□ 0.58
RIF1-204ENST00000430328 PDCD7Q8N8D1 485 aaKnown RBP18.68■□□□□ 0.58
RIF1-204ENST00000430328 A6NNZ2 444 aa18.68■□□□□ 0.58
RIF1-204ENST00000430328 NBPF8Q3BBV2 869 aa18.68■□□□□ 0.58
RIF1-204ENST00000430328 TUBB8Q3ZCM7 444 aa18.68■□□□□ 0.58
RIF1-204ENST00000430328 CUL4BQ13620 913 aa18.68■□□□□ 0.58
RIF1-204ENST00000430328 SAMM50Q9Y512 469 aa18.68■□□□□ 0.58
RIF1-204ENST00000430328 ZNF444Q8N0Y2 327 aaPredicted RBP18.68■□□□□ 0.58
RIF1-204ENST00000430328 TLDC2A0PJX2 215 aa18.68■□□□□ 0.58
RIF1-204ENST00000430328 DNAJC8O75937 253 aaPredicted RBP18.68■□□□□ 0.58
RIF1-204ENST00000430328 KRT83P78385 493 aa18.68■□□□□ 0.58
RIF1-204ENST00000430328 UBLCP1Q8WVY7 318 aaPredicted RBP18.68■□□□□ 0.58
RIF1-204ENST00000430328 MAP3K7CLP57077 242 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 IFT81Q8WYA0 676 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 UBE2HP62256 183 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 TTF1Q15361 905 aaPredicted RBP18.67■□□□□ 0.58
RIF1-204ENST00000430328 GPR161Q8N6U8 529 aaKnown RBP18.67■□□□□ 0.58
RIF1-204ENST00000430328 CETN3O15182 167 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
RIF1-204ENST00000430328 COG7P83436 770 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 CCDC102BQ68D86 513 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 CXorf38Q8TB03 319 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 INPP5BP32019 993 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 INF2Q27J81 1249 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 ISM2Q6H9L7 571 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 HAUS7Q99871 368 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 IRX4P78413 519 aa18.67■□□□□ 0.58
RIF1-204ENST00000430328 EXOSC9Q06265 439 aaKnown RBP18.67■□□□□ 0.58
RIF1-204ENST00000430328 MAK16Q9BXY0 300 aaKnown RBP18.66■□□□□ 0.58
RIF1-204ENST00000430328 PHACTR2O75167 634 aa18.66■□□□□ 0.58
RIF1-204ENST00000430328 MYL6BP14649 208 aa18.66■□□□□ 0.58
RIF1-204ENST00000430328 CCDC7Q96M83 1385 aa18.66■□□□□ 0.58
RIF1-204ENST00000430328 ZNF131P52739 623 aa18.66■□□□□ 0.58
RIF1-204ENST00000430328 GIGYF1O75420 1035 aaPredicted RBP18.66■□□□□ 0.58
RIF1-204ENST00000430328 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
RIF1-204ENST00000430328 TBCAO75347 108 aaKnown RBP18.66■□□□□ 0.58
RIF1-204ENST00000430328 BCAR3O75815 825 aa18.66■□□□□ 0.58
RIF1-204ENST00000430328 TERF1P54274 439 aa18.66■□□□□ 0.58
RIF1-204ENST00000430328 TMEM110-MUSTN1A8MSY1 372 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 SKILP12757 684 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 LRCH2Q5VUJ6 765 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 ATF7IPQ6VMQ6 1270 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 ANKFY1Q9P2R3 1169 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 PTGS1P23219 599 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 LRRC43Q8N309 656 aa18.65■□□□□ 0.58
RIF1-204ENST00000430328 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
RIF1-204ENST00000430328 CA8P35219 290 aa18.64■□□□□ 0.58
RIF1-204ENST00000430328 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.58
RIF1-204ENST00000430328 BCAP29Q9UHQ4 241 aa18.64■□□□□ 0.58
RIF1-204ENST00000430328 ATP6V0A2Q9Y487 856 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 TAOK1Q7L7X3 1001 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.64■□□□□ 0.57
RIF1-204ENST00000430328 IMPG2Q9BZV3 1241 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 CABP4P57796 275 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 CALCOCO2Q13137 446 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 CCDC82Q8N4S0 544 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 TSGA10Q9BZW7 698 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 ZNF213O14771 459 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 WDR46O15213 610 aaKnown RBP18.64■□□□□ 0.57
RIF1-204ENST00000430328 GCKP35557 465 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 MTHFSP49914 203 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 AP1ARQ63HQ0 302 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 RNF41Q9H4P4 317 aaPredicted RBP18.64■□□□□ 0.57
RIF1-204ENST00000430328 MAP2K2P36507 400 aa18.64■□□□□ 0.57
RIF1-204ENST00000430328 CUX2O14529 1486 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 RANBP6O60518 1105 aaKnown RBP18.63■□□□□ 0.57
RIF1-204ENST00000430328 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
RIF1-204ENST00000430328 AFAP1L1Q8TED9 768 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 ARHGAP25P42331 645 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 GLRX3O76003 335 aaKnown RBP18.63■□□□□ 0.57
RIF1-204ENST00000430328 LIMCH1Q9UPQ0 1083 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 OGFRQ9NZT2 677 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 CHMP2AO43633 222 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 MSANTD4Q8NCY6 345 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 GABPB2Q8TAK5 448 aaPredicted RBP18.63■□□□□ 0.57
RIF1-204ENST00000430328 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
RIF1-204ENST00000430328 UAP1Q16222 522 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms