RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 PLEKHO1Q53GL0 409 aaPredicted RBP17.83■□□□□ 0.44
LINC00839-202ENST00000429940 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
LINC00839-202ENST00000429940 SNRKQ9NRH2 765 aa17.83■□□□□ 0.44
LINC00839-202ENST00000429940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
LINC00839-202ENST00000429940 PHRF1Q9P1Y6 1649 aaKnown RBP17.82■□□□□ 0.44
LINC00839-202ENST00000429940 A0A0D9SFI3 127 aa17.82■□□□□ 0.44
LINC00839-202ENST00000429940 SUCLG2Q96I99 432 aa17.82■□□□□ 0.44
LINC00839-202ENST00000429940 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
LINC00839-202ENST00000429940 FSD1Q9BTV5 496 aa17.82■□□□□ 0.44
LINC00839-202ENST00000429940 MRVI1Q9Y6F6 885 aa17.82■□□□□ 0.44
LINC00839-202ENST00000429940 GRM8O00222 908 aa17.82■□□□□ 0.44
LINC00839-202ENST00000429940 GIGYF1O75420 1035 aaPredicted RBP17.82■□□□□ 0.44
LINC00839-202ENST00000429940 CHAF1AQ13111 956 aaPredicted RBP17.82■□□□□ 0.44
LINC00839-202ENST00000429940 SMAP1Q8IYB5 467 aaPredicted RBP17.82■□□□□ 0.44
LINC00839-202ENST00000429940 BICC1Q9H694 974 aaKnown RBP17.82■□□□□ 0.44
LINC00839-202ENST00000429940 GOLGA6L4A6NEF3 574 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 RPS6KB1P23443 525 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 ANKRD24Q8TF21 1146 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 SCAND2PQ9GZW5 306 aaPredicted RBP17.81■□□□□ 0.44
LINC00839-202ENST00000429940 TNMDQ9H2S6 317 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 TLR7Q9NYK1 1049 aaKnown RBP17.81■□□□□ 0.44
LINC00839-202ENST00000429940 RNMTO43148 476 aaKnown RBP17.81■□□□□ 0.44
LINC00839-202ENST00000429940 LUZP1Q86V48 1076 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 LINS1Q8NG48 757 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 SPATA32Q96LK8 384 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 BOLA2Q9H3K6 86 aa17.81■□□□□ 0.44
LINC00839-202ENST00000429940 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
LINC00839-202ENST00000429940 C1orf141Q5JVX7 400 aa17.8■□□□□ 0.44
LINC00839-202ENST00000429940 KAZALD1Q96I82 304 aa17.8■□□□□ 0.44
LINC00839-202ENST00000429940 DACT1Q9NYF0 836 aa17.8■□□□□ 0.44
LINC00839-202ENST00000429940 TOB2Q14106 344 aaPredicted RBP17.79■□□□□ 0.44
LINC00839-202ENST00000429940 LARP1Q6PKG0 1096 aaKnown RBP17.79■□□□□ 0.44
LINC00839-202ENST00000429940 CKAP2LQ8IYA6 745 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 ALDH8A1Q9H2A2 487 aaPredicted RBP17.79■□□□□ 0.44
LINC00839-202ENST00000429940 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
LINC00839-202ENST00000429940 TAF6LQ9Y6J9 622 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 NCAPD2Q15021 1401 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 MED23Q9ULK4 1368 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 PRAMEF22A3QJZ6 481 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 PTGS1P23219 599 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 ANO6Q4KMQ2 910 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 AMOTQ4VCS5 1084 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 SIL1Q9H173 461 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 UTYO14607 1347 aa17.79■□□□□ 0.44
LINC00839-202ENST00000429940 STK3Q13188 491 aa17.78■□□□□ 0.44
LINC00839-202ENST00000429940 DDX58O95786 925 aaKnown RBP17.78■□□□□ 0.44
LINC00839-202ENST00000429940 CERKQ8TCT0 537 aa17.78■□□□□ 0.44
LINC00839-202ENST00000429940 LEO1Q8WVC0 666 aaPredicted RBP17.78■□□□□ 0.44
LINC00839-202ENST00000429940 CBX8Q9HC52 389 aa17.78■□□□□ 0.44
LINC00839-202ENST00000429940 PRDM11Q9NQV5 511 aa17.78■□□□□ 0.44
LINC00839-202ENST00000429940 DDX19AQ9NUU7 478 aaKnown RBP17.78■□□□□ 0.44
LINC00839-202ENST00000429940 HMG20BQ9P0W2 317 aa17.78■□□□□ 0.44
LINC00839-202ENST00000429940 HEG1Q9ULI3 1381 aa17.77■□□□□ 0.44
LINC00839-202ENST00000429940 RIOK3O14730 519 aaKnown RBP17.77■□□□□ 0.44
LINC00839-202ENST00000429940 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
LINC00839-202ENST00000429940 OVOS2A0A0G2JMS6 1433 aa17.77■□□□□ 0.43
LINC00839-202ENST00000429940 ZNF589Q86UQ0 364 aaPredicted RBP17.77■□□□□ 0.43
LINC00839-202ENST00000429940 CLSTN2Q9H4D0 955 aa17.77■□□□□ 0.43
LINC00839-202ENST00000429940 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.43
LINC00839-202ENST00000429940 JCADQ9P266 1359 aa17.76■□□□□ 0.43
LINC00839-202ENST00000429940 DRC7Q8IY82 874 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 NLRP2Q9NX02 1062 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 ERBB3P21860 1342 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 TSGA10IPQ3SY00 556 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 RBM43Q6ZSC3 357 aaKnown RBP17.75■□□□□ 0.43
LINC00839-202ENST00000429940 CCDC186Q7Z3E2 898 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 PRDM10Q9NQV6 1147 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 COL18A1P39060 1754 aa17.75■□□□□ 0.43
LINC00839-202ENST00000429940 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
LINC00839-202ENST00000429940 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
LINC00839-202ENST00000429940 BICD2Q8TD16 824 aa17.74■□□□□ 0.43
LINC00839-202ENST00000429940 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
LINC00839-202ENST00000429940 NR1I2O75469 434 aa17.74■□□□□ 0.43
LINC00839-202ENST00000429940 TAF5LO75529 589 aa17.74■□□□□ 0.43
LINC00839-202ENST00000429940 TRIM5Q9C035 493 aa17.74■□□□□ 0.43
LINC00839-202ENST00000429940 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
LINC00839-202ENST00000429940 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
LINC00839-202ENST00000429940 ZNF75DP51815 510 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 KRT32Q14532 448 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 PLA2G4DQ86XP0 818 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
LINC00839-202ENST00000429940 PGBD1Q96JS3 809 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 MRC1P22897 1456 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 AHDC1Q5TGY3 1603 aaPredicted RBP17.73■□□□□ 0.43
LINC00839-202ENST00000429940 ABCA3Q99758 1704 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 JAK2O60674 1132 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 IGKV5-2P06315 115 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 TDRD7Q8NHU6 1098 aaKnown RBP17.73■□□□□ 0.43
LINC00839-202ENST00000429940 GTF3C6Q969F1 213 aa17.73■□□□□ 0.43
LINC00839-202ENST00000429940 EDC3Q96F86 508 aaKnown RBP17.73■□□□□ 0.43
LINC00839-202ENST00000429940 ADAMTS2O95450 1211 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 ZNF165P49910 485 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 LRMPQ12912 555 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 USPL1Q5W0Q7 1092 aa17.72■□□□□ 0.43
LINC00839-202ENST00000429940 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.72■□□□□ 0.43
LINC00839-202ENST00000429940 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms