RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 GOLPH3LQ9H4A5 285 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 DNAI1Q9UI46 699 aa12.99□□□□□ -0.33
SEMA4D-209ENST00000429836 MYO5BQ9ULV0 1848 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 CPS1P31327 1500 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 SASH3O75995 380 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 OAS2P29728 719 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 TPM4P67936 248 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 TXLNBQ8N3L3 684 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 FAM227BQ96M60 508 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 RASSF4Q9H2L5 321 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 HECW2Q9P2P5 1572 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 ARMCX5Q6P1M9 558 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 TMC6Q7Z403 805 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 CCAR1Q8IX12 1150 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 RUFY2Q8WXA3 655 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 CHMP4CQ96CF2 233 aa12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 EDC4Q6P2E9 1401 aaKnown RBP12.98□□□□□ -0.33
SEMA4D-209ENST00000429836 CAVIN2O95810 425 aa12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 OS9Q13438 667 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 ZSCAN26Q16670 478 aa12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 FBXO31Q5XUX0 539 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 BRF1Q92994 677 aa12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 MYO1CO00159 1063 aa12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 RESTQ13127 1097 aa12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 MTHFSDQ2M296 383 aaKnown RBP12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 ARGLU1Q9NWB6 273 aaPredicted RBP12.97□□□□□ -0.33
SEMA4D-209ENST00000429836 SMC2O95347 1197 aa12.96□□□□□ -0.33
SEMA4D-209ENST00000429836 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.33
SEMA4D-209ENST00000429836 CARD6Q9BX69 1037 aa12.96□□□□□ -0.33
SEMA4D-209ENST00000429836 SLC27A2O14975 620 aa12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 FANCGO15287 622 aa12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 MUM1L1Q5H9M0 696 aa12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 BLOC1S2Q6QNY1 142 aa12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 MNS1Q8NEH6 495 aa12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 KCNB2Q92953 911 aa12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 KCND1Q9NSA2 647 aa12.96□□□□□ -0.34
SEMA4D-209ENST00000429836 GLRX3O76003 335 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 NBPF7P0C2Y1 421 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 GSDMDP57764 484 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 POLA2Q14181 598 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 CCDC30Q5VVM6 783 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 XPO4Q9C0E2 1151 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 TBC1D8O95759 1140 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 IFNKQ9P0W0 207 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 XRN1Q8IZH2 1706 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 H3BQV1 296 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 SMC1AQ14683 1233 aaKnown RBP12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 IFFO2Q5TF58 517 aa12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 OSBPL5Q9H0X9 879 aaPredicted RBP12.95□□□□□ -0.34
SEMA4D-209ENST00000429836 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 SFPQP23246 707 aaKnown RBP eCLIP12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 NOP2P46087 812 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 NMIQ13287 307 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 FAM177A1Q8N128 213 aaPredicted RBP12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 ANO10Q9NW15 660 aa12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 SETD1AO15047 1707 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 DHX16O60231 1041 aaKnown RBP12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 TADA3O75528 432 aa12.94□□□□□ -0.34
SEMA4D-209ENST00000429836 ARHGEF10O15013 1369 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 KINO60870 393 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 LMAN1P49257 510 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 EVCP57679 992 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 ETF1P62495 437 aaKnown RBP12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 CCDC73Q6ZRK6 1079 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 REXO1L1PQ8IX06 675 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 UBXN6Q9BZV1 441 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 ADGRL3Q9HAR2 1447 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 PSMA5P28066 241 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 PTPN21Q16825 1174 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 MAP4K1Q92918 833 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 MAP3K19Q56UN5 1328 aa12.93□□□□□ -0.34
SEMA4D-209ENST00000429836 GOLGA8FQ08AF8 430 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 GOLGA8DPQ0D2H9 430 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 GPS2Q13227 327 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 GNL2Q13823 731 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 MAP3K5Q99683 1374 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 CASQ1P31415 396 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 CC2D1AQ6P1N0 951 aaPredicted RBP12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 ECHDC1Q9NTX5 307 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 ALKQ9UM73 1620 aa12.92□□□□□ -0.34
SEMA4D-209ENST00000429836 A0A0D9SFI3 127 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 CTAGE5O15320 804 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 ADD1P35611 737 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 DPCR1Q3MIW9 517 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 TRIM65Q6PJ69 517 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 FSIP1Q8NA03 581 aa12.91□□□□□ -0.34
SEMA4D-209ENST00000429836 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms