RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SSFA2P28290 1259 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 DDX46Q7L014 1031 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 UPF3BQ9BZI7 483 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 ADGRL1O94910 1474 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 PZPP20742 1482 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 C6orf163Q5TEZ5 329 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 SHANK2Q9UPX8 1470 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 MORC2Q9Y6X9 1032 aaPredicted RBP8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 CEBPZQ03701 1054 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 HSP90AB2PQ58FF8 381 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 DAAM1Q9Y4D1 1078 aa8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 LARP1BQ659C4 914 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-202ENST00000429713 FLOT1O75955 427 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 MAP4K4O95819 1239 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 CASTP20810 708 aaKnown RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 CDC25BP30305 580 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 NUCB1Q02818 461 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 NBPF10Q6P3W6 841 aaKnown RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 PDILTQ8N807 584 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 RPGRIP1LQ68CZ1 1315 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 ZFXP17010 805 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 CHUKO15111 745 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 ZSCAN20P17040 1043 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 LACTBP83111 547 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 BCL2L12Q9HB09 334 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 ACTN2P35609 894 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 AFAP1L1Q8TED9 768 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 OSBPL9Q96SU4 736 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 GAS2L2Q8NHY3 880 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 RRP15Q9Y3B9 282 aaKnown RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 MYH9P35579 1960 aaKnown RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 NFE2L2Q16236 605 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 MYH6P13533 1939 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 GCOM1H8Y6P7 765 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 MYZAPP0CAP1 466 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 MYH8P13535 1937 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 SGSM2O43147 1006 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 CCDC158Q5M9N0 1113 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 CEP85LQ5SZL2 805 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 FBF1Q8TES7 1133 aa8.61□□□□□ -1.03
SYNPO2-202ENST00000429713 TARBP1Q13395 1621 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 CEP57Q86XR8 500 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 ARMC2Q8NEN0 867 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 CWC27Q6UX04 472 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 NFXL1Q6ZNB6 911 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 RALYLQ86SE5 291 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 SPATA32Q96LK8 384 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 CTAGE1Q96RT6 745 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 FSD1Q9BTV5 496 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 ACTR5Q9H9F9 607 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 NUP153P49790 1475 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 STIM1Q13586 685 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 MCM6Q14566 821 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 HSP90AA5PQ58FG0 334 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 ZSCAN16Q9H4T2 348 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 MYO1AQ9UBC5 1043 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 TTC41PQ6P2S7 1318 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 TTC5Q8N0Z6 440 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 SATB2Q9UPW6 733 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 GOLGA4Q13439 2230 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 CRYMQ14894 314 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 SPAG1Q07617 926 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 RIC3Q7Z5B4 369 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 ANKRD12Q6UB98 2062 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 CTAGE9A4FU28 777 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 EVI5O60447 810 aa8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 MRPS25P82663 173 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 SAFBQ15424 915 aaKnown RBP eCLIP8.6□□□□□ -1.03
SYNPO2-202ENST00000429713 KIF20BQ96Q89 1820 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 MAP3K9P80192 1104 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 KRBA2Q6ZNG9 492 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 ERICH2A1L162 156 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 BRAPQ7Z569 592 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 CCDC97Q96F63 343 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 MRFAP1L1Q96HT8 127 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 PREX2Q70Z35 1606 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 GCKP35557 465 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 PPP2R5EQ16537 467 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 ARHGAP18Q8N392 663 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 ALS2CR12Q96Q35 445 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 CABP1Q9NZU7 370 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 TPX2Q9ULW0 747 aaKnown RBP8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 MYO1CO00159 1063 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 NAA25Q14CX7 972 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 SULT6B1Q6IMI4 303 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 ARHGAP45Q92619 1136 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 CDKL5O76039 1030 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 DESP17661 470 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 TBC1D31Q96DN5 1066 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 ME1P48163 572 aa8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 IRX5P78411 483 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-202ENST00000429713 SLC8A3P57103 927 aa8.59□□□□□ -1.04
SYNPO2-202ENST00000429713 TADA2BQ86TJ2 420 aa8.59□□□□□ -1.04
SYNPO2-202ENST00000429713 ZNF165P49910 485 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms