RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 CNBD1Q8NA66 436 aa21.29■■□□□ 1
LINC00887-203ENST00000429578 ANKRD31Q8N7Z5 1873 aa21.29■■□□□ 1
LINC00887-203ENST00000429578 SRGAP3O43295 1099 aa21.28■■□□□ 1
LINC00887-203ENST00000429578 HMMRO75330 724 aa21.28■■□□□ 1
LINC00887-203ENST00000429578 IGHDP01880 384 aa21.28■■□□□ 1
LINC00887-203ENST00000429578 PELP1Q8IZL8 1130 aaKnown RBP21.28■■□□□ 1
LINC00887-203ENST00000429578 TNRC6CQ9HCJ0 1690 aaKnown RBP21.28■■□□□ 1
LINC00887-203ENST00000429578 ABCC12Q96J65 1359 aa21.27■■□□□ 1
LINC00887-203ENST00000429578 NPHP1O15259 732 aa21.27■■□□□ 1
LINC00887-203ENST00000429578 HCLS1P14317 486 aaPredicted RBP21.27■■□□□ 1
LINC00887-203ENST00000429578 PRR5LQ6MZQ0 368 aa21.27■■□□□ 1
LINC00887-203ENST00000429578 LMBR1LQ6UX01 489 aa21.27■■□□□ 1
LINC00887-203ENST00000429578 SSH3Q8TE77 659 aa21.27■■□□□ 1
LINC00887-203ENST00000429578 CSF1RP07333 972 aa21.26■□□□□ 0.99
LINC00887-203ENST00000429578 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
LINC00887-203ENST00000429578 RIC1Q4ADV7 1423 aa21.26■□□□□ 0.99
LINC00887-203ENST00000429578 CTSWP56202 376 aa21.26■□□□□ 0.99
LINC00887-203ENST00000429578 POLA2Q14181 598 aa21.26■□□□□ 0.99
LINC00887-203ENST00000429578 TTLL11Q8NHH1 800 aa21.25■□□□□ 0.99
LINC00887-203ENST00000429578 TAF1P21675 1872 aa21.25■□□□□ 0.99
LINC00887-203ENST00000429578 ST5P78524 1137 aa21.24■□□□□ 0.99
LINC00887-203ENST00000429578 SPEF2Q9C093 1822 aa21.24■□□□□ 0.99
LINC00887-203ENST00000429578 KDM2BQ8NHM5 1336 aa21.24■□□□□ 0.99
LINC00887-203ENST00000429578 CHMP3Q9Y3E7 222 aa21.24■□□□□ 0.99
LINC00887-203ENST00000429578 CD2APQ9Y5K6 639 aa21.24■□□□□ 0.99
LINC00887-203ENST00000429578 CENPQQ7L2Z9 268 aaPredicted RBP21.23■□□□□ 0.99
LINC00887-203ENST00000429578 CCDC24Q8N4L8 307 aa21.23■□□□□ 0.99
LINC00887-203ENST00000429578 NLRP3Q96P20 1036 aa21.23■□□□□ 0.99
LINC00887-203ENST00000429578 GOLGB1Q14789 3259 aaKnown RBP21.22■□□□□ 0.99
LINC00887-203ENST00000429578 DCTPP1Q9H773 170 aa21.22■□□□□ 0.99
LINC00887-203ENST00000429578 SF3B3Q15393 1217 aaKnown RBP21.21■□□□□ 0.99
LINC00887-203ENST00000429578 RFX5P48382 616 aaPredicted RBP21.21■□□□□ 0.99
LINC00887-203ENST00000429578 FAM161AQ3B820 660 aa21.21■□□□□ 0.99
LINC00887-203ENST00000429578 CCDC152Q4G0S7 254 aa21.21■□□□□ 0.99
LINC00887-203ENST00000429578 GCC1Q96CN9 775 aa21.21■□□□□ 0.99
LINC00887-203ENST00000429578 GREM2Q9H772 168 aa21.21■□□□□ 0.99
LINC00887-203ENST00000429578 RTL9Q8NET4 1388 aa21.21■□□□□ 0.99
LINC00887-203ENST00000429578 KIF13BQ9NQT8 1826 aa21.2■□□□□ 0.98
LINC00887-203ENST00000429578 CCDC57Q2TAC2 916 aa21.2■□□□□ 0.98
LINC00887-203ENST00000429578 SMC5Q8IY18 1101 aa21.2■□□□□ 0.98
LINC00887-203ENST00000429578 CCDC85AQ96PX6 553 aaPredicted RBP21.2■□□□□ 0.98
LINC00887-203ENST00000429578 IFIT5Q13325 482 aaKnown RBP21.19■□□□□ 0.98
LINC00887-203ENST00000429578 C3orf67Q6ZVT6 689 aa21.19■□□□□ 0.98
LINC00887-203ENST00000429578 COPRSQ9NQ92 184 aa21.19■□□□□ 0.98
LINC00887-203ENST00000429578 CHD4Q14839 1912 aa21.19■□□□□ 0.98
LINC00887-203ENST00000429578 ITGA6P23229 1130 aa21.18■□□□□ 0.98
LINC00887-203ENST00000429578 BRIP1Q9BX63 1249 aa21.18■□□□□ 0.98
LINC00887-203ENST00000429578 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
LINC00887-203ENST00000429578 PTPN12Q05209 780 aaKnown RBP21.18■□□□□ 0.98
LINC00887-203ENST00000429578 COL11A2P13942 1736 aaPredicted RBP21.18■□□□□ 0.98
LINC00887-203ENST00000429578 ANKRD18BA2A2Z9 1011 aa21.17■□□□□ 0.98
LINC00887-203ENST00000429578 SURF6O75683 361 aaKnown RBP21.17■□□□□ 0.98
LINC00887-203ENST00000429578 YBX3P16989 372 aaKnown RBP eCLIP21.17■□□□□ 0.98
LINC00887-203ENST00000429578 PA2G4Q9UQ80 394 aaKnown RBP21.17■□□□□ 0.98
LINC00887-203ENST00000429578 EXOC6BQ9Y2D4 811 aa21.17■□□□□ 0.98
LINC00887-203ENST00000429578 KLRG2A4D1S0 409 aaPredicted RBP21.16■□□□□ 0.98
LINC00887-203ENST00000429578 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
LINC00887-203ENST00000429578 CRY2Q49AN0 593 aa21.16■□□□□ 0.98
LINC00887-203ENST00000429578 ZNF784Q8NCA9 323 aaPredicted RBP21.16■□□□□ 0.98
LINC00887-203ENST00000429578 KLHDC4Q8TBB5 520 aa21.16■□□□□ 0.98
LINC00887-203ENST00000429578 CACNA1SQ13698 1873 aa21.15■□□□□ 0.98
LINC00887-203ENST00000429578 HSP90AB4PQ58FF6 505 aa21.15■□□□□ 0.98
LINC00887-203ENST00000429578 DLEC1Q9Y238 1755 aa21.15■□□□□ 0.98
LINC00887-203ENST00000429578 COL4A1P02462 1669 aa21.14■□□□□ 0.98
LINC00887-203ENST00000429578 PDE6BP35913 854 aa21.14■□□□□ 0.97
LINC00887-203ENST00000429578 TAF7LQ5H9L4 462 aa21.14■□□□□ 0.97
LINC00887-203ENST00000429578 ZNF594Q96JF6 807 aaPredicted RBP21.14■□□□□ 0.97
LINC00887-203ENST00000429578 SEC31BQ9NQW1 1179 aa21.14■□□□□ 0.97
LINC00887-203ENST00000429578 A0A1B0GUL6 1792 aa21.14■□□□□ 0.97
LINC00887-203ENST00000429578 C10orf71Q711Q0 1435 aa21.14■□□□□ 0.97
LINC00887-203ENST00000429578 RAB11FIP3O75154 756 aa21.13■□□□□ 0.97
LINC00887-203ENST00000429578 SIL1Q9H173 461 aa21.13■□□□□ 0.97
LINC00887-203ENST00000429578 FBXO3Q9UK99 471 aa21.13■□□□□ 0.97
LINC00887-203ENST00000429578 G3BP1Q13283 466 aaKnown RBP eCLIP21.12■□□□□ 0.97
LINC00887-203ENST00000429578 CDC5LQ99459 802 aaKnown RBP21.12■□□□□ 0.97
LINC00887-203ENST00000429578 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
LINC00887-203ENST00000429578 RPGRQ92834 1020 aaKnown RBP21.12■□□□□ 0.97
LINC00887-203ENST00000429578 EYA2O00167 538 aa21.11■□□□□ 0.97
LINC00887-203ENST00000429578 CIAO1O76071 339 aa21.11■□□□□ 0.97
LINC00887-203ENST00000429578 OS9Q13438 667 aaPredicted RBP21.11■□□□□ 0.97
LINC00887-203ENST00000429578 ERC1Q8IUD2 1116 aa21.11■□□□□ 0.97
LINC00887-203ENST00000429578 HOXA10P31260 410 aaPredicted RBP21.1■□□□□ 0.97
LINC00887-203ENST00000429578 NUCB1Q02818 461 aa21.1■□□□□ 0.97
LINC00887-203ENST00000429578 ANKRD45Q5TZF3 282 aa21.1■□□□□ 0.97
LINC00887-203ENST00000429578 LDHAL6AQ6ZMR3 332 aa21.1■□□□□ 0.97
LINC00887-203ENST00000429578 WWC3Q9ULE0 1092 aa21.1■□□□□ 0.97
LINC00887-203ENST00000429578 APBB1O00213 710 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 SRGNP10124 158 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 IGHMBP2P38935 993 aaKnown RBP21.09■□□□□ 0.97
LINC00887-203ENST00000429578 ATG9AQ7Z3C6 839 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 KIF1BPQ96EK5 621 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 LRRCC1Q9C099 1032 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 IL15P40933 162 aaPredicted RBP21.09■□□□□ 0.97
LINC00887-203ENST00000429578 LRRC24Q50LG9 513 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 ANKRD18AQ8IVF6 992 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 RHPN1Q8TCX5 695 aa21.09■□□□□ 0.97
LINC00887-203ENST00000429578 CELF1Q92879 486 aaKnown RBP21.09■□□□□ 0.97
LINC00887-203ENST00000429578 RBM17Q96I25 401 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms