RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 RBM10P98175 930 aaKnown RBP13.66□□□□□ -0.22
LINC01238-203ENST00000429456 LRP10Q7Z4F1 713 aa13.66□□□□□ -0.22
LINC01238-203ENST00000429456 AP5Z1O43299 807 aa13.66□□□□□ -0.22
LINC01238-203ENST00000429456 CCDC192P0DO97 292 aa13.66□□□□□ -0.22
LINC01238-203ENST00000429456 PHKG2P15735 406 aa13.66□□□□□ -0.22
LINC01238-203ENST00000429456 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
LINC01238-203ENST00000429456 FGD1P98174 961 aa13.66□□□□□ -0.22
LINC01238-203ENST00000429456 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC01238-203ENST00000429456 FERMT3Q86UX7 667 aa13.66□□□□□ -0.22
LINC01238-203ENST00000429456 RAPGEF4Q8WZA2 1011 aa13.66□□□□□ -0.22
LINC01238-203ENST00000429456 TTC12Q9H892 705 aaPredicted RBP13.66□□□□□ -0.22
LINC01238-203ENST00000429456 DBNLQ9UJU6 430 aaKnown RBP13.66□□□□□ -0.22
LINC01238-203ENST00000429456 COL15A1P39059 1388 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 RFX7Q2KHR2 1363 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 PTPN12Q05209 780 aaKnown RBP13.65□□□□□ -0.22
LINC01238-203ENST00000429456 KRT32Q14532 448 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 TNNI3KQ59H18 835 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 ANKRD13DQ6ZTN6 518 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 NFATC2IPQ8NCF5 419 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 EDC3Q96F86 508 aaKnown RBP13.65□□□□□ -0.22
LINC01238-203ENST00000429456 MAP7D2Q96T17 732 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 FPGT-TNNI3KV9GXZ4 949 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 KIF1AQ12756 1690 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 LIG1P18858 919 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 RABL6Q3YEC7 729 aaPredicted RBP13.65□□□□□ -0.22
LINC01238-203ENST00000429456 FAM173BQ6P4H8 233 aa13.65□□□□□ -0.22
LINC01238-203ENST00000429456 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.22
LINC01238-203ENST00000429456 AFDNP55196 1824 aaKnown RBP13.65□□□□□ -0.22
LINC01238-203ENST00000429456 ALS2Q96Q42 1657 aa13.65□□□□□ -0.23
LINC01238-203ENST00000429456 TFCP2Q12800 502 aa13.64□□□□□ -0.23
LINC01238-203ENST00000429456 MAP3K11Q16584 847 aa13.64□□□□□ -0.23
LINC01238-203ENST00000429456 SCAND2PQ9GZW5 306 aaPredicted RBP13.64□□□□□ -0.23
LINC01238-203ENST00000429456 NUP62CLQ9H1M0 184 aa13.64□□□□□ -0.23
LINC01238-203ENST00000429456 SPTLC3Q9NUV7 552 aa13.64□□□□□ -0.23
LINC01238-203ENST00000429456 FAM13BQ9NYF5 915 aa13.64□□□□□ -0.23
LINC01238-203ENST00000429456 TATP17735 454 aaPredicted RBP13.64□□□□□ -0.23
LINC01238-203ENST00000429456 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC01238-203ENST00000429456 ABCC6O95255 1503 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 SNRPA1P09661 255 aaKnown RBP13.63□□□□□ -0.23
LINC01238-203ENST00000429456 ZC3H6P61129 1189 aaKnown RBP13.63□□□□□ -0.23
LINC01238-203ENST00000429456 MYRIPQ8NFW9 859 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 FAM200AQ8TCP9 573 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 ZNF609O15014 1411 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 C1orf167Q5SNV9 1468 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 MEGF6O75095 1541 aa13.63□□□□□ -0.23
LINC01238-203ENST00000429456 TPM3P06753 285 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 STK3Q13188 491 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 IFNL2Q8IZJ0 200 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 JARID2Q92833 1246 aaPredicted RBP13.62□□□□□ -0.23
LINC01238-203ENST00000429456 SPATA32Q96LK8 384 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 NEK1Q96PY6 1258 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 NLRP2Q9NX02 1062 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 MRVI1Q9Y6F6 885 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
LINC01238-203ENST00000429456 ARFGEF2Q9Y6D5 1785 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 PLCB2Q00722 1185 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 TYRO3Q06418 890 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
LINC01238-203ENST00000429456 RBM43Q6ZSC3 357 aaKnown RBP13.62□□□□□ -0.23
LINC01238-203ENST00000429456 LEO1Q8WVC0 666 aaPredicted RBP13.62□□□□□ -0.23
LINC01238-203ENST00000429456 PRIMPOLQ96LW4 560 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 HAUS7Q99871 368 aa13.62□□□□□ -0.23
LINC01238-203ENST00000429456 COL18A1P39060 1754 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 CASP7P55210 303 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 C17orf53Q8N3J3 647 aaPredicted RBP13.61□□□□□ -0.23
LINC01238-203ENST00000429456 DBNDD2Q9BQY9 259 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 KCNF1Q9H3M0 494 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 DDX19AQ9NUU7 478 aaKnown RBP13.61□□□□□ -0.23
LINC01238-203ENST00000429456 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 TFIP11Q9UBB9 837 aaKnown RBP13.61□□□□□ -0.23
LINC01238-203ENST00000429456 JAK2O60674 1132 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 CAMK4Q16566 473 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 Q6ZUG5 572 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 MTERF4Q7Z6M4 381 aaKnown RBP13.61□□□□□ -0.23
LINC01238-203ENST00000429456 TNMDQ9H2S6 317 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 NDUFB9Q9Y6M9 179 aa13.61□□□□□ -0.23
LINC01238-203ENST00000429456 PLEKHG2Q9H7P9 1386 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 GOLGA6L4A6NEF3 574 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 CYP21A2P08686 494 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 PIP4K2AP48426 406 aaPredicted RBP13.6□□□□□ -0.23
LINC01238-203ENST00000429456 RESTQ13127 1097 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 CCDC129Q6ZRS4 1044 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 TTC5Q8N0Z6 440 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 KIAA1524Q8TCG1 905 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 DCAF5Q96JK2 942 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 FMNL2Q96PY5 1086 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 SEC62Q99442 399 aaKnown RBP13.6□□□□□ -0.23
LINC01238-203ENST00000429456 DNAJC2Q99543 621 aaKnown RBP13.6□□□□□ -0.23
LINC01238-203ENST00000429456 CLSTN2Q9H4D0 955 aa13.6□□□□□ -0.23
LINC01238-203ENST00000429456 GOLGA6L6A8MZA4 724 aa13.59□□□□□ -0.23
LINC01238-203ENST00000429456 CHGBP05060 677 aa13.59□□□□□ -0.23
LINC01238-203ENST00000429456 HMGN5P82970 282 aaKnown RBP13.59□□□□□ -0.23
LINC01238-203ENST00000429456 PGBD1Q96JS3 809 aa13.59□□□□□ -0.23
LINC01238-203ENST00000429456 BCL11BQ9C0K0 894 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms