RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 GRIN2AQ12879 1464 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 TSNARE1Q96NA8 513 aa14.65□□□□□ -0.06
LDB3-205ENST00000429277 ZBTB43O43298 467 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 CALM1P0DP23 149 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 CALM2P0DP24 149 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 CALM3P0DP25 149 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 CYLC1P35663 651 aaPredicted RBP14.64□□□□□ -0.07
LDB3-205ENST00000429277 IL15P40933 162 aaPredicted RBP14.64□□□□□ -0.07
LDB3-205ENST00000429277 SNW1Q13573 536 aaKnown RBP14.64□□□□□ -0.07
LDB3-205ENST00000429277 DRC1Q96MC2 740 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 TRIM47Q96LD4 638 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 SYKP43405 635 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 CALCOCO1Q9P1Z2 691 aa14.64□□□□□ -0.07
LDB3-205ENST00000429277 GNAT2P19087 354 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 ACEP12821 1306 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 PABPN1LA6NDY0 278 aaKnown RBP14.63□□□□□ -0.07
LDB3-205ENST00000429277 NBPF6Q5VWK0 638 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 NBPF5PQ86XG9 351 aaPredicted RBP14.63□□□□□ -0.07
LDB3-205ENST00000429277 SREK1Q8WXA9 508 aaKnown RBP14.63□□□□□ -0.07
LDB3-205ENST00000429277 NBPF4Q96M43 638 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 N4BP3O15049 544 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 NOP2P46087 812 aaKnown RBP14.63□□□□□ -0.07
LDB3-205ENST00000429277 SOS1Q07889 1333 aaPredicted RBP14.63□□□□□ -0.07
LDB3-205ENST00000429277 ZSCAN22P10073 491 aaPredicted RBP14.63□□□□□ -0.07
LDB3-205ENST00000429277 TUBB4BP68371 445 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 SAMM50Q9Y512 469 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 PRIMPOLQ96LW4 560 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 TBC1D32Q96NH3 1257 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
LDB3-205ENST00000429277 MSH6P52701 1360 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 FANCAO15360 1455 aa14.63□□□□□ -0.07
LDB3-205ENST00000429277 AKR1B10O60218 316 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 NUP160Q12769 1436 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 GIMAP7Q8NHV1 300 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 HOMER2Q9NSB8 354 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 PLB1Q6P1J6 1458 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 TSPY3P0CV98 308 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 TSPY8P0CW00 308 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 PLCG2P16885 1265 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 NUCB1Q02818 461 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 ATP2B3Q16720 1220 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 C20orf194Q5TEA3 1177 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 TNRQ92752 1358 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 NPHP3Q7Z494 1330 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 KLF18A0A0U1RQI7 1052 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 KRT13P13646 458 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 KIAA0753Q2KHM9 967 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 CEP112Q8N8E3 955 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 ADCY5O95622 1261 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 CALML3P27482 149 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 RTN1Q16799 776 aa14.62□□□□□ -0.07
LDB3-205ENST00000429277 FERP16591 822 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 IBSPP21815 317 aaPredicted RBP14.61□□□□□ -0.07
LDB3-205ENST00000429277 IFIT1BQ5T764 474 aaKnown RBP14.61□□□□□ -0.07
LDB3-205ENST00000429277 C6orf163Q5TEZ5 329 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 SPAG5Q96R06 1193 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 NYXQ9GZU5 481 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 TFIP11Q9UBB9 837 aaKnown RBP14.61□□□□□ -0.07
LDB3-205ENST00000429277 IKBKGQ9Y6K9 419 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 MCMDC2Q4G0Z9 681 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 CTR9Q6PD62 1173 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 PSMA7O14818 248 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 BMS1Q14692 1282 aaKnown RBP14.61□□□□□ -0.07
LDB3-205ENST00000429277 AKAP4Q5JQC9 854 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 FMNL3Q8IVF7 1028 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 RTL9Q8NET4 1388 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 CCDC155Q8N6L0 562 aa14.61□□□□□ -0.07
LDB3-205ENST00000429277 ATP5J2-PTCD1G3V325 749 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 GRIPAP1Q4V328 841 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 ZCRB1Q8TBF4 217 aaKnown RBP14.6□□□□□ -0.07
LDB3-205ENST00000429277 NLRP3Q96P20 1036 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 UTP14AQ9BVJ6 771 aaKnown RBP14.6□□□□□ -0.07
LDB3-205ENST00000429277 COMMD10Q9Y6G5 202 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 TTC41PQ6P2S7 1318 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 CHMP4BP1P59074 171 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 ANKRD44Q8N8A2 993 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 MRPS27Q92552 414 aaKnown RBP14.6□□□□□ -0.07
LDB3-205ENST00000429277 BICD1Q96G01 975 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 SELENOOQ9BVL4 669 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 SNRKQ9NRH2 765 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 STAT6P42226 847 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 VAT1LQ9HCJ6 419 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.6□□□□□ -0.07
LDB3-205ENST00000429277 POLR3GO15318 223 aaPredicted RBP14.6□□□□□ -0.07
LDB3-205ENST00000429277 KSR2Q6VAB6 950 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 BRF1Q92994 677 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 ALG1Q9BT22 464 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 RASAL2Q9UJF2 1139 aa14.6□□□□□ -0.07
LDB3-205ENST00000429277 BIN1O00499 593 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 KIF4AO95239 1232 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 CYP7A1P22680 504 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 LMBR1Q8WVP7 490 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 ERICH4A6NGS2 130 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 GRM8O00222 908 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 HAND2P61296 217 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 PRPF4BQ13523 1007 aaKnown RBP14.59□□□□□ -0.07
LDB3-205ENST00000429277 ZNF804AQ7Z570 1209 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 C16orf45Q96MC5 204 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms