RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 ALDH1B1P30837 517 aa14.65□□□□□ -0.06
PABPC1P11-201ENST00000428966 BCAR3O75815 825 aa14.65□□□□□ -0.06
PABPC1P11-201ENST00000428966 UBE3BQ7Z3V4 1068 aa14.65□□□□□ -0.06
PABPC1P11-201ENST00000428966 NOB1Q9ULX3 412 aaKnown RBP14.65□□□□□ -0.06
PABPC1P11-201ENST00000428966 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 ARFGEF1Q9Y6D6 1849 aa14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 H7C1W4 665 aa14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 CASP7P55210 303 aa14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 SF3B3Q15393 1217 aaKnown RBP14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 IPO9Q96P70 1041 aaKnown RBP14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 CRAMP1Q96RY5 1269 aa14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 ABCC4O15439 1325 aa14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
PABPC1P11-201ENST00000428966 NFKBIEO00221 500 aa14.63□□□□□ -0.07
PABPC1P11-201ENST00000428966 RBM17Q96I25 401 aaKnown RBP14.63□□□□□ -0.07
PABPC1P11-201ENST00000428966 CDHR2Q9BYE9 1310 aa14.63□□□□□ -0.07
PABPC1P11-201ENST00000428966 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
PABPC1P11-201ENST00000428966 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
PABPC1P11-201ENST00000428966 PDE8AO60658 829 aa14.62□□□□□ -0.07
PABPC1P11-201ENST00000428966 YY1P25490 414 aa14.62□□□□□ -0.07
PABPC1P11-201ENST00000428966 PRELPP51888 382 aa14.62□□□□□ -0.07
PABPC1P11-201ENST00000428966 RASSF7Q02833 373 aa14.62□□□□□ -0.07
PABPC1P11-201ENST00000428966 DDX46Q7L014 1031 aaKnown RBP14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 CCDC85AQ96PX6 553 aaPredicted RBP14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 LAMB2P55268 1798 aa14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 COL4A1P02462 1669 aa14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 KIF16BQ96L93 1317 aa14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 GRM8O00222 908 aa14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 ALDH1L1O75891 902 aa14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 MS4A1P11836 297 aa14.61□□□□□ -0.07
PABPC1P11-201ENST00000428966 SNED1Q8TER0 1413 aa14.6□□□□□ -0.07
PABPC1P11-201ENST00000428966 PPEF1O14829 653 aaPredicted RBP14.6□□□□□ -0.07
PABPC1P11-201ENST00000428966 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
PABPC1P11-201ENST00000428966 CTSWP56202 376 aa14.6□□□□□ -0.07
PABPC1P11-201ENST00000428966 TTLL11Q8NHH1 800 aa14.6□□□□□ -0.07
PABPC1P11-201ENST00000428966 CELF1Q92879 486 aaKnown RBP14.6□□□□□ -0.07
PABPC1P11-201ENST00000428966 SEC31BQ9NQW1 1179 aa14.6□□□□□ -0.07
PABPC1P11-201ENST00000428966 NBPF7P0C2Y1 421 aaPredicted RBP14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 GRAPQ13588 217 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 GRAPLQ8TC17 118 aaPredicted RBP14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 ZBTB47Q9UFB7 747 aaPredicted RBP14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 TRIM27P14373 513 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 CCDC152Q4G0S7 254 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 CCDC93Q567U6 631 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 SOGA3Q5TF21 947 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 ARHGAP45Q92619 1136 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 PLA2G12BQ9BX93 195 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 TNNQ9UQP3 1299 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 CACNA1SQ13698 1873 aa14.59□□□□□ -0.07
PABPC1P11-201ENST00000428966 BBOX1O75936 387 aa14.58□□□□□ -0.08
PABPC1P11-201ENST00000428966 C9orf131Q5VYM1 1079 aa14.58□□□□□ -0.08
PABPC1P11-201ENST00000428966 TAOK3Q9H2K8 898 aa14.58□□□□□ -0.08
PABPC1P11-201ENST00000428966 GREM2Q9H772 168 aa14.58□□□□□ -0.08
PABPC1P11-201ENST00000428966 ATP6V0A2Q9Y487 856 aa14.58□□□□□ -0.08
PABPC1P11-201ENST00000428966 API5Q9BZZ5 524 aaKnown RBP14.58□□□□□ -0.08
PABPC1P11-201ENST00000428966 BCL11AQ9H165 835 aa14.58□□□□□ -0.08
PABPC1P11-201ENST00000428966 UTYO14607 1347 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 CHD4Q14839 1912 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 FOXO4P98177 505 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 EPHA10Q5JZY3 1008 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 KAZALD1Q96I82 304 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 USP44Q9H0E7 712 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 RNF181Q9P0P0 153 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 LTBP3Q9NS15 1303 aa14.57□□□□□ -0.08
PABPC1P11-201ENST00000428966 CSF1RP07333 972 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 LMNB1P20700 586 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 RPS8P62241 208 aaKnown RBP14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 ATF7IPQ6VMQ6 1270 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 RTKN2Q8IZC4 609 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 TAF1P21675 1872 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 FAM161AQ3B820 660 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 CC2D2BQ6DHV5 1058 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 CLUAP1Q96AJ1 413 aa14.56□□□□□ -0.08
PABPC1P11-201ENST00000428966 FER1L6Q2WGJ9 1857 aa14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 IPO8O15397 1037 aaKnown RBP14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 CCT4P50991 539 aaKnown RBP14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 FKBP4Q02790 459 aaKnown RBP eCLIP14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 SP8Q8IXZ3 490 aa14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 SUCLG2Q96I99 432 aa14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 ZNF277Q9NRM2 450 aaPredicted RBP14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 RTL9Q8NET4 1388 aa14.55□□□□□ -0.08
PABPC1P11-201ENST00000428966 ZNF784Q8NCA9 323 aaPredicted RBP14.54□□□□□ -0.08
PABPC1P11-201ENST00000428966 ITGA6P23229 1130 aa14.54□□□□□ -0.08
PABPC1P11-201ENST00000428966 INTS3Q68E01 1043 aaKnown RBP14.54□□□□□ -0.08
PABPC1P11-201ENST00000428966 LMBR1LQ6UX01 489 aa14.54□□□□□ -0.08
PABPC1P11-201ENST00000428966 PSMD1Q99460 953 aa14.54□□□□□ -0.08
PABPC1P11-201ENST00000428966 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
PABPC1P11-201ENST00000428966 ZKSCAN2Q63HK3 967 aa14.53□□□□□ -0.08
PABPC1P11-201ENST00000428966 TMC4Q7Z404 712 aa14.53□□□□□ -0.08
PABPC1P11-201ENST00000428966 BICC1Q9H694 974 aaKnown RBP14.53□□□□□ -0.08
PABPC1P11-201ENST00000428966 PDE4AP27815 886 aa14.52□□□□□ -0.09
PABPC1P11-201ENST00000428966 GRIPAP1Q4V328 841 aa14.52□□□□□ -0.09
PABPC1P11-201ENST00000428966 ANKRD18AQ8IVF6 992 aa14.52□□□□□ -0.09
PABPC1P11-201ENST00000428966 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.52□□□□□ -0.09
PABPC1P11-201ENST00000428966 CDC5LQ99459 802 aaKnown RBP14.52□□□□□ -0.09
PABPC1P11-201ENST00000428966 MEIS3Q99687 375 aa14.52□□□□□ -0.09
PABPC1P11-201ENST00000428966 TMX4Q9H1E5 349 aaPredicted RBP14.52□□□□□ -0.09
PABPC1P11-201ENST00000428966 SBF1O95248 1867 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms