RNA–Protein interactions for RNA: ENST00000428460.1

CAD-203, Transcript of carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase, humanhuman

TSL 5

Gene CAD, Length 953 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAD-203ENST00000428460 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
CAD-203ENST00000428460 SF3B3Q15393 1217 aaKnown RBP16.34■□□□□ 0.21
CAD-203ENST00000428460 SOGA3Q5TF21 947 aa16.34■□□□□ 0.21
CAD-203ENST00000428460 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
CAD-203ENST00000428460 KDM2BQ8NHM5 1336 aa16.34■□□□□ 0.21
CAD-203ENST00000428460 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.2
CAD-203ENST00000428460 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.2
CAD-203ENST00000428460 SYNE4Q8N205 404 aa16.33■□□□□ 0.2
CAD-203ENST00000428460 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.2
CAD-203ENST00000428460 TNRC6CQ9HCJ0 1690 aaKnown RBP16.33■□□□□ 0.2
CAD-203ENST00000428460 COL11A2P13942 1736 aaPredicted RBP16.33■□□□□ 0.2
CAD-203ENST00000428460 GRM8O00222 908 aa16.32■□□□□ 0.2
CAD-203ENST00000428460 LAMB2P55268 1798 aa16.32■□□□□ 0.2
CAD-203ENST00000428460 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
CAD-203ENST00000428460 DDX46Q7L014 1031 aaKnown RBP16.32■□□□□ 0.2
CAD-203ENST00000428460 UBE3BQ7Z3V4 1068 aa16.32■□□□□ 0.2
CAD-203ENST00000428460 FRAT1Q92837 279 aaPredicted RBP16.32■□□□□ 0.2
CAD-203ENST00000428460 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
CAD-203ENST00000428460 RCAN3Q9UKA8 241 aa16.32■□□□□ 0.2
CAD-203ENST00000428460 UTYO14607 1347 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 ABCC4O15439 1325 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 CCDC152Q4G0S7 254 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 GRIPAP1Q4V328 841 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 PRPF40BQ6NWY9 871 aaKnown RBP16.31■□□□□ 0.2
CAD-203ENST00000428460 TMC4Q7Z404 712 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 SMC1BQ8NDV3 1235 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 PCDH10Q9P2E7 1040 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 HDAC5Q9UQL6 1122 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 ARFGEF1Q9Y6D6 1849 aa16.31■□□□□ 0.2
CAD-203ENST00000428460 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
CAD-203ENST00000428460 BBOX1O75936 387 aa16.3■□□□□ 0.2
CAD-203ENST00000428460 MS4A1P11836 297 aa16.3■□□□□ 0.2
CAD-203ENST00000428460 TRIM27P14373 513 aa16.3■□□□□ 0.2
CAD-203ENST00000428460 CASP7P55210 303 aa16.3■□□□□ 0.2
CAD-203ENST00000428460 C9orf131Q5VYM1 1079 aa16.3■□□□□ 0.2
CAD-203ENST00000428460 INTS3Q68E01 1043 aaKnown RBP16.3■□□□□ 0.2
CAD-203ENST00000428460 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
CAD-203ENST00000428460 C3orf67Q6ZVT6 689 aa16.3■□□□□ 0.2
CAD-203ENST00000428460 CTSWP56202 376 aa16.29■□□□□ 0.2
CAD-203ENST00000428460 TMX4Q9H1E5 349 aaPredicted RBP16.29■□□□□ 0.2
CAD-203ENST00000428460 RTL9Q8NET4 1388 aa16.28■□□□□ 0.2
CAD-203ENST00000428460 GRAPQ13588 217 aa16.28■□□□□ 0.2
CAD-203ENST00000428460 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.28■□□□□ 0.2
CAD-203ENST00000428460 GRAPLQ8TC17 118 aaPredicted RBP16.28■□□□□ 0.2
CAD-203ENST00000428460 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
CAD-203ENST00000428460 FTSJ3Q8IY81 847 aaKnown RBP16.27■□□□□ 0.2
CAD-203ENST00000428460 RTKN2Q8IZC4 609 aa16.27■□□□□ 0.2
CAD-203ENST00000428460 TTLL11Q8NHH1 800 aa16.27■□□□□ 0.2
CAD-203ENST00000428460 C7orf43Q8WVR3 580 aa16.27■□□□□ 0.2
CAD-203ENST00000428460 JARID2Q92833 1246 aaPredicted RBP16.27■□□□□ 0.2
CAD-203ENST00000428460 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
CAD-203ENST00000428460 C21orf2O43822 256 aa16.26■□□□□ 0.19
CAD-203ENST00000428460 CSF1RP07333 972 aa16.26■□□□□ 0.19
CAD-203ENST00000428460 CCDC93Q567U6 631 aa16.26■□□□□ 0.19
CAD-203ENST00000428460 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
CAD-203ENST00000428460 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
CAD-203ENST00000428460 USP44Q9H0E7 712 aa16.26■□□□□ 0.19
CAD-203ENST00000428460 SLX4Q8IY92 1834 aa16.25■□□□□ 0.19
CAD-203ENST00000428460 NBPF7P0C2Y1 421 aaPredicted RBP16.25■□□□□ 0.19
CAD-203ENST00000428460 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
CAD-203ENST00000428460 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
CAD-203ENST00000428460 MYH3P11055 1940 aa16.24■□□□□ 0.19
CAD-203ENST00000428460 GNAI3P08754 354 aa16.24■□□□□ 0.19
CAD-203ENST00000428460 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
CAD-203ENST00000428460 RPS8P62241 208 aaKnown RBP16.24■□□□□ 0.19
CAD-203ENST00000428460 FOXO4P98177 505 aa16.24■□□□□ 0.19
CAD-203ENST00000428460 SP8Q8IXZ3 490 aa16.24■□□□□ 0.19
CAD-203ENST00000428460 ANKRD18AQ8IVF6 992 aa16.23■□□□□ 0.19
CAD-203ENST00000428460 CLUAP1Q96AJ1 413 aa16.23■□□□□ 0.19
CAD-203ENST00000428460 RNF181Q9P0P0 153 aa16.23■□□□□ 0.19
CAD-203ENST00000428460 RABL6Q3YEC7 729 aaPredicted RBP16.22■□□□□ 0.19
CAD-203ENST00000428460 PSMD1Q99460 953 aa16.22■□□□□ 0.19
CAD-203ENST00000428460 TAOK3Q9H2K8 898 aa16.22■□□□□ 0.19
CAD-203ENST00000428460 GREM2Q9H772 168 aa16.22■□□□□ 0.19
CAD-203ENST00000428460 SBF1O95248 1867 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 ANKRD18BA2A2Z9 1011 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 ITGA6P23229 1130 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 FKBP4Q02790 459 aaKnown RBP eCLIP16.21■□□□□ 0.19
CAD-203ENST00000428460 IFIT5Q13325 482 aaKnown RBP16.21■□□□□ 0.19
CAD-203ENST00000428460 CCDC57Q2TAC2 916 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 LMBR1LQ6UX01 489 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 TMEM57Q8N5G2 664 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 CELF1Q92879 486 aaKnown RBP16.21■□□□□ 0.19
CAD-203ENST00000428460 SUCLG2Q96I99 432 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 SEC31BQ9NQW1 1179 aa16.21■□□□□ 0.19
CAD-203ENST00000428460 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
CAD-203ENST00000428460 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
CAD-203ENST00000428460 NFKBIEO00221 500 aa16.2■□□□□ 0.18
CAD-203ENST00000428460 LMNB1P20700 586 aa16.2■□□□□ 0.18
CAD-203ENST00000428460 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
CAD-203ENST00000428460 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
CAD-203ENST00000428460 SUPT20HQ8NEM7 779 aa16.2■□□□□ 0.18
CAD-203ENST00000428460 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
CAD-203ENST00000428460 CCDC85AQ96PX6 553 aaPredicted RBP16.2■□□□□ 0.18
CAD-203ENST00000428460 VPS33BQ9H267 617 aa16.2■□□□□ 0.18
CAD-203ENST00000428460 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
CAD-203ENST00000428460 BICC1Q9H694 974 aaKnown RBP16.2■□□□□ 0.18
CAD-203ENST00000428460 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
CAD-203ENST00000428460 FER1L6Q2WGJ9 1857 aa16.19■□□□□ 0.18
CAD-203ENST00000428460 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms