RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 PTMAP06454 111 aaKnown RBP9.35□□□□□ -0.91
LRCH3-204ENST00000428136 TPM3P06753 285 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 UQCRHP07919 91 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 CASP7P55210 303 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 TNNI3KQ59H18 835 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 GIMAP6Q6P9H5 292 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 CDC37L1Q7L3B6 337 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 FPGT-TNNI3KV9GXZ4 949 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 AFDNP55196 1824 aaKnown RBP9.35□□□□□ -0.91
LRCH3-204ENST00000428136 GTF2F1P35269 517 aaKnown RBP eCLIP9.35□□□□□ -0.91
LRCH3-204ENST00000428136 SCAND2PQ9GZW5 306 aaPredicted RBP9.35□□□□□ -0.91
LRCH3-204ENST00000428136 DBNLQ9UJU6 430 aaKnown RBP9.35□□□□□ -0.91
LRCH3-204ENST00000428136 TAF6LQ9Y6J9 622 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 MEGF6O75095 1541 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 CCDC192P0DO97 292 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 AIMP1Q12904 312 aaKnown RBP9.35□□□□□ -0.91
LRCH3-204ENST00000428136 NOLC1Q14978 699 aaKnown RBP eCLIP9.35□□□□□ -0.91
LRCH3-204ENST00000428136 ANKRD13DQ6ZTN6 518 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 PRIMPOLQ96LW4 560 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 HAUS7Q99871 368 aa9.35□□□□□ -0.91
LRCH3-204ENST00000428136 VPS37CA5D8V6 355 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-204ENST00000428136 SNRPA1P09661 255 aaKnown RBP9.34□□□□□ -0.91
LRCH3-204ENST00000428136 KCNJ4P48050 445 aa9.34□□□□□ -0.91
LRCH3-204ENST00000428136 MTERF4Q7Z6M4 381 aaKnown RBP9.34□□□□□ -0.91
LRCH3-204ENST00000428136 MYRIPQ8NFW9 859 aa9.34□□□□□ -0.91
LRCH3-204ENST00000428136 GTF3C6Q969F1 213 aa9.34□□□□□ -0.91
LRCH3-204ENST00000428136 MYD88Q99836 296 aa9.34□□□□□ -0.91
LRCH3-204ENST00000428136 ZNF609O15014 1411 aa9.34□□□□□ -0.91
LRCH3-204ENST00000428136 U3KPZ7 1027 aaPredicted RBP9.34□□□□□ -0.91
LRCH3-204ENST00000428136 HMGN5P82970 282 aaKnown RBP9.33□□□□□ -0.92
LRCH3-204ENST00000428136 SLC39A6Q13433 755 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 IFNL2Q8IZJ0 200 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 KLHDC4Q8TBB5 520 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 FAM200AQ8TCP9 573 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 RAPGEF4Q8WZA2 1011 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 ZNF496Q96IT1 587 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-204ENST00000428136 PALLDQ8WX93 1383 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 SH3TC1Q8TE82 1336 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-204ENST00000428136 MAP3K11Q16584 847 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 SMARCC2Q8TAQ2 1214 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 LLPHQ9BRT6 129 aaKnown RBP9.33□□□□□ -0.92
LRCH3-204ENST00000428136 SIL1Q9H173 461 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 GPR108Q9NPR9 543 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 MRVI1Q9Y6F6 885 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 NUP188Q5SRE5 1749 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 LIG1P18858 919 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 TFCP2Q12800 502 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 RESTQ13127 1097 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 KIAA1524Q8TCG1 905 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 DDX54Q8TDD1 881 aaKnown RBP9.33□□□□□ -0.92
LRCH3-204ENST00000428136 LEO1Q8WVC0 666 aaPredicted RBP9.33□□□□□ -0.92
LRCH3-204ENST00000428136 NEK1Q96PY6 1258 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 AGXT2Q9BYV1 514 aa9.33□□□□□ -0.92
LRCH3-204ENST00000428136 DDX19AQ9NUU7 478 aaKnown RBP9.33□□□□□ -0.92
LRCH3-204ENST00000428136 SPEF2Q9C093 1822 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 MYL6BP14649 208 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 MCMDC2Q4G0Z9 681 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 NUP62CLQ9H1M0 184 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 CLSTN2Q9H4D0 955 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 USP16Q9Y5T5 823 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 UBR2Q8IWV8 1755 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 MYH15Q9Y2K3 1946 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 LAMA4Q16363 1823 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 PLBD2Q8NHP8 589 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 KCNF1Q9H3M0 494 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 ZSCAN16Q9H4T2 348 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-204ENST00000428136 C19orf44Q9H6X5 657 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 TTC12Q9H892 705 aaPredicted RBP9.32□□□□□ -0.92
LRCH3-204ENST00000428136 TJP1Q07157 1748 aa9.32□□□□□ -0.92
LRCH3-204ENST00000428136 H7C1W4 665 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 HMGB1P09429 215 aaKnown RBP9.31□□□□□ -0.92
LRCH3-204ENST00000428136 TYRO3Q06418 890 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 ZNF830Q96NB3 372 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-204ENST00000428136 FMNL2Q96PY5 1086 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 DCCP43146 1447 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 PFKFB2O60825 505 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 CYP21A2P08686 494 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 FOXO4P98177 505 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 FBXL16Q8N461 479 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 KBTBD3Q8NAB2 608 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 EDC3Q96F86 508 aaKnown RBP9.31□□□□□ -0.92
LRCH3-204ENST00000428136 PGBD1Q96JS3 809 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 SPATA32Q96LK8 384 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 HELLSQ9NRZ9 838 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 CYP27B1O15528 508 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 CAVIN2O95810 425 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 DSCC1Q9BVC3 393 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 PAPPAQ13219 1627 aa9.31□□□□□ -0.92
LRCH3-204ENST00000428136 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
LRCH3-204ENST00000428136 EXOSC10Q01780 885 aaKnown RBP9.3□□□□□ -0.92
LRCH3-204ENST00000428136 NAA16Q6N069 864 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-204ENST00000428136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.3□□□□□ -0.92
LRCH3-204ENST00000428136 TDRD7Q8NHU6 1098 aaKnown RBP9.3□□□□□ -0.92
LRCH3-204ENST00000428136 TCEANC2Q96MN5 208 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 DBNDD2Q9BQY9 259 aa9.3□□□□□ -0.92
LRCH3-204ENST00000428136 DACT1Q9NYF0 836 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms