RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 C10orf71Q711Q0 1435 aa19.24■□□□□ 0.67
COL11A1-204ENST00000427239 H0YIN7 160 aa19.24■□□□□ 0.67
COL11A1-204ENST00000427239 TGFB2P61812 414 aa19.24■□□□□ 0.67
COL11A1-204ENST00000427239 SRGNP10124 158 aa19.23■□□□□ 0.67
COL11A1-204ENST00000427239 CCDC57Q2TAC2 916 aa19.23■□□□□ 0.67
COL11A1-204ENST00000427239 CEP85Q6P2H3 762 aa19.23■□□□□ 0.67
COL11A1-204ENST00000427239 C3orf67Q6ZVT6 689 aa19.23■□□□□ 0.67
COL11A1-204ENST00000427239 RPGRQ92834 1020 aaKnown RBP19.23■□□□□ 0.67
COL11A1-204ENST00000427239 SRGAP3O43295 1099 aa19.22■□□□□ 0.67
COL11A1-204ENST00000427239 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
COL11A1-204ENST00000427239 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
COL11A1-204ENST00000427239 RTL9Q8NET4 1388 aa19.22■□□□□ 0.67
COL11A1-204ENST00000427239 NPR1P16066 1061 aa19.22■□□□□ 0.67
COL11A1-204ENST00000427239 DDX46Q7L014 1031 aaKnown RBP19.22■□□□□ 0.67
COL11A1-204ENST00000427239 MASTLQ96GX5 879 aa19.22■□□□□ 0.67
COL11A1-204ENST00000427239 RBM17Q96I25 401 aaKnown RBP19.22■□□□□ 0.67
COL11A1-204ENST00000427239 GREM2Q9H772 168 aa19.22■□□□□ 0.67
COL11A1-204ENST00000427239 PPP1R1BQ9UD71 204 aaPredicted RBP19.22■□□□□ 0.67
COL11A1-204ENST00000427239 CHMP3Q9Y3E7 222 aa19.22■□□□□ 0.67
COL11A1-204ENST00000427239 HMMRO75330 724 aa19.21■□□□□ 0.67
COL11A1-204ENST00000427239 ITGA6P23229 1130 aa19.21■□□□□ 0.67
COL11A1-204ENST00000427239 ALDH1B1P30837 517 aa19.21■□□□□ 0.67
COL11A1-204ENST00000427239 C2CD5Q86YS7 1000 aa19.21■□□□□ 0.67
COL11A1-204ENST00000427239 SSH3Q8TE77 659 aa19.21■□□□□ 0.67
COL11A1-204ENST00000427239 PCDHB15Q9Y5E8 787 aa19.21■□□□□ 0.67
COL11A1-204ENST00000427239 DDX60Q8IY21 1712 aaKnown RBP19.21■□□□□ 0.67
COL11A1-204ENST00000427239 ANKRD18BA2A2Z9 1011 aa19.2■□□□□ 0.66
COL11A1-204ENST00000427239 CCDC85AQ96PX6 553 aaPredicted RBP19.2■□□□□ 0.66
COL11A1-204ENST00000427239 CRAMP1Q96RY5 1269 aa19.2■□□□□ 0.66
COL11A1-204ENST00000427239 CDC5LQ99459 802 aaKnown RBP19.2■□□□□ 0.66
COL11A1-204ENST00000427239 LAMB2P55268 1798 aa19.2■□□□□ 0.66
COL11A1-204ENST00000427239 PNMA6EA0A0J9YXQ4 647 aa19.2■□□□□ 0.66
COL11A1-204ENST00000427239 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
COL11A1-204ENST00000427239 STYK1Q6J9G0 422 aa19.2■□□□□ 0.66
COL11A1-204ENST00000427239 POLA2Q14181 598 aa19.19■□□□□ 0.66
COL11A1-204ENST00000427239 SIRT2Q8IXJ6 389 aa19.19■□□□□ 0.66
COL11A1-204ENST00000427239 SEC31BQ9NQW1 1179 aa19.18■□□□□ 0.66
COL11A1-204ENST00000427239 BBOX1O75936 387 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 CHRNA5P30532 468 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 RPS8P62241 208 aaKnown RBP19.17■□□□□ 0.66
COL11A1-204ENST00000427239 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 KLHL34Q8N239 644 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 CNKSR1Q969H4 720 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 MYH3P11055 1940 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 A0A0G2JLW4 131 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 DPEP1P16444 411 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
COL11A1-204ENST00000427239 PTPN12Q05209 780 aaKnown RBP19.17■□□□□ 0.66
COL11A1-204ENST00000427239 GRAPQ13588 217 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 ANKRD18AQ8IVF6 992 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 GRAPLQ8TC17 118 aaPredicted RBP19.17■□□□□ 0.66
COL11A1-204ENST00000427239 ZNF622Q969S3 477 aaKnown RBP eCLIP19.17■□□□□ 0.66
COL11A1-204ENST00000427239 FHDC1Q9C0D6 1143 aaPredicted RBP19.17■□□□□ 0.66
COL11A1-204ENST00000427239 RWDD1Q9H446 243 aaPredicted RBP19.17■□□□□ 0.66
COL11A1-204ENST00000427239 COPRSQ9NQ92 184 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
COL11A1-204ENST00000427239 ANKRD31Q8N7Z5 1873 aa19.16■□□□□ 0.66
COL11A1-204ENST00000427239 GOLGB1Q14789 3259 aaKnown RBP19.16■□□□□ 0.66
COL11A1-204ENST00000427239 KCNA3P22001 575 aa19.16■□□□□ 0.66
COL11A1-204ENST00000427239 IGHMBP2P38935 993 aaKnown RBP19.16■□□□□ 0.66
COL11A1-204ENST00000427239 HDAC1Q13547 482 aaPredicted RBP19.16■□□□□ 0.66
COL11A1-204ENST00000427239 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
COL11A1-204ENST00000427239 TNRC6CQ9HCJ0 1690 aaKnown RBP19.16■□□□□ 0.66
COL11A1-204ENST00000427239 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
COL11A1-204ENST00000427239 TMC4Q7Z404 712 aa19.15■□□□□ 0.66
COL11A1-204ENST00000427239 MPHOSPH8Q99549 860 aa19.15■□□□□ 0.66
COL11A1-204ENST00000427239 PIM2Q9P1W9 311 aa19.15■□□□□ 0.66
COL11A1-204ENST00000427239 CELF1Q92879 486 aaKnown RBP19.14■□□□□ 0.66
COL11A1-204ENST00000427239 BSDC1Q9NW68 430 aaPredicted RBP19.14■□□□□ 0.66
COL11A1-204ENST00000427239 TTLL6Q8N841 843 aa19.14■□□□□ 0.65
COL11A1-204ENST00000427239 ZNF594Q96JF6 807 aaPredicted RBP19.14■□□□□ 0.65
COL11A1-204ENST00000427239 SYT17Q9BSW7 474 aa19.14■□□□□ 0.65
COL11A1-204ENST00000427239 HSP90AB4PQ58FF6 505 aa19.13■□□□□ 0.65
COL11A1-204ENST00000427239 NOP58Q9Y2X3 529 aaKnown RBP19.13■□□□□ 0.65
COL11A1-204ENST00000427239 SURF6O75683 361 aaKnown RBP19.12■□□□□ 0.65
COL11A1-204ENST00000427239 CIAO1O76071 339 aa19.12■□□□□ 0.65
COL11A1-204ENST00000427239 KLHDC4Q8TBB5 520 aa19.12■□□□□ 0.65
COL11A1-204ENST00000427239 EYA2O00167 538 aa19.11■□□□□ 0.65
COL11A1-204ENST00000427239 G3BP1Q13283 466 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL11A1-204ENST00000427239 TMX4Q9H1E5 349 aaPredicted RBP19.11■□□□□ 0.65
COL11A1-204ENST00000427239 DCTPP1Q9H773 170 aa19.11■□□□□ 0.65
COL11A1-204ENST00000427239 CNNM1Q9NRU3 951 aa19.11■□□□□ 0.65
COL11A1-204ENST00000427239 PPP4R2Q9NY27 417 aa19.11■□□□□ 0.65
COL11A1-204ENST00000427239 PA2G4Q9UQ80 394 aaKnown RBP19.11■□□□□ 0.65
COL11A1-204ENST00000427239 PRPF40BQ6NWY9 871 aaKnown RBP19.11■□□□□ 0.65
COL11A1-204ENST00000427239 PPEF1O14829 653 aaPredicted RBP19.1■□□□□ 0.65
COL11A1-204ENST00000427239 IL15P40933 162 aaPredicted RBP19.1■□□□□ 0.65
COL11A1-204ENST00000427239 DALRD3Q5D0E6 543 aaKnown RBP19.1■□□□□ 0.65
COL11A1-204ENST00000427239 SP8Q8IXZ3 490 aa19.1■□□□□ 0.65
COL11A1-204ENST00000427239 NLGN2Q8NFZ4 835 aa19.1■□□□□ 0.65
COL11A1-204ENST00000427239 SIL1Q9H173 461 aa19.1■□□□□ 0.65
COL11A1-204ENST00000427239 RIPOR2Q9Y4F9 1068 aa19.1■□□□□ 0.65
COL11A1-204ENST00000427239 GCC1Q96CN9 775 aa19.09■□□□□ 0.65
COL11A1-204ENST00000427239 CCDC136Q96JN2 1154 aa19.09■□□□□ 0.65
COL11A1-204ENST00000427239 ATP6V0A2Q9Y487 856 aa19.09■□□□□ 0.65
COL11A1-204ENST00000427239 LRP5O75197 1615 aa19.09■□□□□ 0.65
COL11A1-204ENST00000427239 RAB11FIP3O75154 756 aa19.08■□□□□ 0.65
COL11A1-204ENST00000427239 IGHDP01880 384 aa19.08■□□□□ 0.65
COL11A1-204ENST00000427239 LRRC24Q50LG9 513 aa19.08■□□□□ 0.65
COL11A1-204ENST00000427239 ATG9AQ7Z3C6 839 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms