RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ACIN1Q9UKV3 1341 aaKnown RBP10.26□□□□□ -0.77
C9orf3-205ENST00000427193 C9orf172C9J069 976 aa10.25□□□□□ -0.77
C9orf3-205ENST00000427193 RGS9O75916 674 aaPredicted RBP10.25□□□□□ -0.77
C9orf3-205ENST00000427193 ELNP15502 786 aa10.25□□□□□ -0.77
C9orf3-205ENST00000427193 AFF1P51825 1210 aaKnown RBP10.25□□□□□ -0.77
C9orf3-205ENST00000427193 RAC1P63000 192 aa10.25□□□□□ -0.77
C9orf3-205ENST00000427193 IFT43Q96FT9 208 aa10.25□□□□□ -0.77
C9orf3-205ENST00000427193 LRFN2Q9ULH4 789 aa10.25□□□□□ -0.77
C9orf3-205ENST00000427193 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
C9orf3-205ENST00000427193 DHX32Q7L7V1 743 aaKnown RBP10.24□□□□□ -0.77
C9orf3-205ENST00000427193 KRT25Q7Z3Z0 450 aa10.24□□□□□ -0.77
C9orf3-205ENST00000427193 FAM35AQ86V20 835 aa10.24□□□□□ -0.77
C9orf3-205ENST00000427193 TRPM4Q8TD43 1214 aa10.24□□□□□ -0.77
C9orf3-205ENST00000427193 SEMA6BQ9H3T3 888 aa10.24□□□□□ -0.77
C9orf3-205ENST00000427193 FRRS1LQ9P0K9 344 aa10.24□□□□□ -0.77
C9orf3-205ENST00000427193 ZFATQ9P243 1243 aa10.24□□□□□ -0.77
C9orf3-205ENST00000427193 RARAP10276 462 aa10.23□□□□□ -0.77
C9orf3-205ENST00000427193 ARID4AP29374 1257 aaPredicted RBP10.23□□□□□ -0.77
C9orf3-205ENST00000427193 TPSG1Q9NRR2 321 aa10.23□□□□□ -0.77
C9orf3-205ENST00000427193 OPLAHO14841 1288 aa10.22□□□□□ -0.77
C9orf3-205ENST00000427193 EGFRP00533 1210 aa10.22□□□□□ -0.77
C9orf3-205ENST00000427193 CPB1P15086 417 aa10.22□□□□□ -0.77
C9orf3-205ENST00000427193 TARSP26639 723 aaKnown RBP10.22□□□□□ -0.77
C9orf3-205ENST00000427193 GPLD1P80108 840 aa10.22□□□□□ -0.77
C9orf3-205ENST00000427193 RSPO4Q2I0M5 234 aaPredicted RBP10.22□□□□□ -0.77
C9orf3-205ENST00000427193 ILDR2Q71H61 639 aa10.22□□□□□ -0.77
C9orf3-205ENST00000427193 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
C9orf3-205ENST00000427193 RTCBQ9Y3I0 505 aaKnown RBP10.22□□□□□ -0.77
C9orf3-205ENST00000427193 SASH3O75995 380 aa10.21□□□□□ -0.77
C9orf3-205ENST00000427193 ITGB7P26010 798 aa10.21□□□□□ -0.77
C9orf3-205ENST00000427193 NKAPLQ5M9Q1 402 aa10.21□□□□□ -0.77
C9orf3-205ENST00000427193 COX20Q5RI15 118 aa10.21□□□□□ -0.77
C9orf3-205ENST00000427193 TREML1Q86YW5 311 aa10.21□□□□□ -0.77
C9orf3-205ENST00000427193 PRIMPOLQ96LW4 560 aa10.21□□□□□ -0.77
C9orf3-205ENST00000427193 LPIN3Q9BQK8 851 aa10.21□□□□□ -0.77
C9orf3-205ENST00000427193 ZBTB42B2RXF5 422 aa10.2□□□□□ -0.78
C9orf3-205ENST00000427193 SELPP16109 830 aa10.2□□□□□ -0.78
C9orf3-205ENST00000427193 NRG1Q02297 640 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-205ENST00000427193 ADGRE1Q14246 886 aa10.2□□□□□ -0.78
C9orf3-205ENST00000427193 OCLNQ16625 522 aa10.2□□□□□ -0.78
C9orf3-205ENST00000427193 XP32Q5T750 250 aa10.2□□□□□ -0.78
C9orf3-205ENST00000427193 FMR1NBQ8N0W7 255 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-205ENST00000427193 TTC9Q92623 222 aa10.2□□□□□ -0.78
C9orf3-205ENST00000427193 COL26A1Q96A83 441 aa10.2□□□□□ -0.78
C9orf3-205ENST00000427193 LENG1Q96BZ8 264 aaPredicted RBP10.2□□□□□ -0.78
C9orf3-205ENST00000427193 PRMT3O60678 531 aa10.19□□□□□ -0.78
C9orf3-205ENST00000427193 NRLP54845 237 aa10.19□□□□□ -0.78
C9orf3-205ENST00000427193 FAM69CQ0P6D2 419 aa10.19□□□□□ -0.78
C9orf3-205ENST00000427193 PERM1Q5SV97 790 aa10.19□□□□□ -0.78
C9orf3-205ENST00000427193 MSL1Q68DK7 614 aa10.19□□□□□ -0.78
C9orf3-205ENST00000427193 ELMSAN1Q6PJG2 1045 aa10.19□□□□□ -0.78
C9orf3-205ENST00000427193 DMRTC2Q8IXT2 367 aaPredicted RBP10.19□□□□□ -0.78
C9orf3-205ENST00000427193 DTWD1Q8N5C7 304 aa10.19□□□□□ -0.78
C9orf3-205ENST00000427193 XYLBO75191 536 aa10.18□□□□□ -0.78
C9orf3-205ENST00000427193 SRPK2P78362 688 aaKnown RBP10.18□□□□□ -0.78
C9orf3-205ENST00000427193 MBTPS1Q14703 1052 aa10.18□□□□□ -0.78
C9orf3-205ENST00000427193 GRIK5Q16478 980 aa10.18□□□□□ -0.78
C9orf3-205ENST00000427193 RGL4Q8IZJ4 473 aa10.18□□□□□ -0.78
C9orf3-205ENST00000427193 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
C9orf3-205ENST00000427193 USP20Q9Y2K6 914 aa10.18□□□□□ -0.78
C9orf3-205ENST00000427193 ATG7O95352 703 aa10.17□□□□□ -0.78
C9orf3-205ENST00000427193 C16orf46Q6P387 395 aa10.17□□□□□ -0.78
C9orf3-205ENST00000427193 TXNRD3Q86VQ6 643 aa10.17□□□□□ -0.78
C9orf3-205ENST00000427193 CMTR1Q8N1G2 835 aaKnown RBP10.17□□□□□ -0.78
C9orf3-205ENST00000427193 Q8N3U1 123 aa10.17□□□□□ -0.78
C9orf3-205ENST00000427193 TLR7Q9NYK1 1049 aaKnown RBP10.17□□□□□ -0.78
C9orf3-205ENST00000427193 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.16□□□□□ -0.78
C9orf3-205ENST00000427193 BRD2P25440 801 aaKnown RBP10.16□□□□□ -0.78
C9orf3-205ENST00000427193 MLLT1Q03111 559 aaPredicted RBP10.16□□□□□ -0.78
C9orf3-205ENST00000427193 DYRK3O43781 588 aa10.15□□□□□ -0.78
C9orf3-205ENST00000427193 SHISA2Q6UWI4 295 aa10.15□□□□□ -0.78
C9orf3-205ENST00000427193 WFDC8Q8IUA0 241 aa10.15□□□□□ -0.78
C9orf3-205ENST00000427193 CXXC1Q9P0U4 656 aaPredicted RBP10.15□□□□□ -0.78
C9orf3-205ENST00000427193 KCNMB2Q9Y691 235 aa10.15□□□□□ -0.78
C9orf3-205ENST00000427193 NCAPD3P42695 1498 aa10.15□□□□□ -0.78
C9orf3-205ENST00000427193 PTCD1O75127 700 aaKnown RBP10.14□□□□□ -0.79
C9orf3-205ENST00000427193 PSAPP07602 524 aa10.14□□□□□ -0.79
C9orf3-205ENST00000427193 PLAURQ03405 335 aa10.14□□□□□ -0.79
C9orf3-205ENST00000427193 ETFBKMTQ8IXQ9 262 aa10.14□□□□□ -0.79
C9orf3-205ENST00000427193 SAP130Q9H0E3 1048 aa10.14□□□□□ -0.79
C9orf3-205ENST00000427193 SMG9Q9H0W8 520 aaKnown RBP10.14□□□□□ -0.79
C9orf3-205ENST00000427193 HOXD8P13378 290 aaPredicted RBP10.13□□□□□ -0.79
C9orf3-205ENST00000427193 EIF2AK2P19525 551 aaKnown RBP10.13□□□□□ -0.79
C9orf3-205ENST00000427193 SOX18P35713 384 aa10.13□□□□□ -0.79
C9orf3-205ENST00000427193 FBXO11Q86XK2 927 aa10.13□□□□□ -0.79
C9orf3-205ENST00000427193 ZMYND15Q9H091 742 aa10.13□□□□□ -0.79
C9orf3-205ENST00000427193 USP21Q9UK80 565 aa10.13□□□□□ -0.79
C9orf3-205ENST00000427193 NESP48681 1621 aa10.12□□□□□ -0.79
C9orf3-205ENST00000427193 ZMYM1Q5SVZ6 1142 aa10.12□□□□□ -0.79
C9orf3-205ENST00000427193 TMEM164Q5U3C3 297 aa10.12□□□□□ -0.79
C9orf3-205ENST00000427193 HFE2Q6ZVN8 426 aa10.12□□□□□ -0.79
C9orf3-205ENST00000427193 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
C9orf3-205ENST00000427193 LOC102724428A0A0B4J2F2 783 aa10.11□□□□□ -0.79
C9orf3-205ENST00000427193 MMP20O60882 483 aa10.11□□□□□ -0.79
C9orf3-205ENST00000427193 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
C9orf3-205ENST00000427193 H2AFB2P0C5Z0 115 aa10.11□□□□□ -0.79
C9orf3-205ENST00000427193 SIK1P57059 783 aa10.11□□□□□ -0.79
C9orf3-205ENST00000427193 CLP1Q92989 425 aaKnown RBP10.11□□□□□ -0.79
C9orf3-205ENST00000427193 GHRHP01286 108 aa10.1□□□□□ -0.79
C9orf3-205ENST00000427193 NLRP13Q86W25 1043 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms