RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 CHRNA2Q15822 529 aa12□□□□□ -0.49
CTCFL-206ENST00000426658 CEP57L1Q8IYX8 460 aa12□□□□□ -0.49
CTCFL-206ENST00000426658 STX1AQ16623 288 aa12□□□□□ -0.49
CTCFL-206ENST00000426658 FAM177A1Q8N128 213 aaPredicted RBP12□□□□□ -0.49
CTCFL-206ENST00000426658 CACTINQ8WUQ7 758 aaKnown RBP12□□□□□ -0.49
CTCFL-206ENST00000426658 ALKQ9UM73 1620 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 ATP2B1P20020 1258 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 NMIQ13287 307 aaPredicted RBP11.99□□□□□ -0.49
CTCFL-206ENST00000426658 SLC39A6Q13433 755 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 SYCP1Q15431 976 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
CTCFL-206ENST00000426658 FAM227BQ96M60 508 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 FRMPD1Q5SYB0 1578 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 CCDC69A6NI79 296 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 ATP5J2-PTCD1G3V325 749 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 PTCD1O75127 700 aaKnown RBP11.99□□□□□ -0.49
CTCFL-206ENST00000426658 CABLES1Q8TDN4 633 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 MAP2P11137 1827 aaKnown RBP11.99□□□□□ -0.49
CTCFL-206ENST00000426658 CRB1P82279 1406 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 PIK3C2BO00750 1634 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 ANKRD26Q9UPS8 1709 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 CTAGE5O15320 804 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 KCNQ3O43525 872 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 NR1I2O75469 434 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 TDRD7Q8NHU6 1098 aaKnown RBP11.99□□□□□ -0.49
CTCFL-206ENST00000426658 MYD88Q99836 296 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 ANO10Q9NW15 660 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 KIF20BQ96Q89 1820 aa11.99□□□□□ -0.49
CTCFL-206ENST00000426658 ELP1O95163 1332 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 KIF2AO00139 706 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 EDC3Q96F86 508 aaKnown RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 ARHGEF10O15013 1369 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 METP08581 1390 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 FKBP4Q02790 459 aaKnown RBP eCLIP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 ISM2Q6H9L7 571 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 DDX46Q7L014 1031 aaKnown RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 CCAR1Q8IX12 1150 aaKnown RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 BRF1Q92994 677 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 ARGLU1Q9NWB6 273 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 CTNNA3Q9UI47 895 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 SLC27A2O14975 620 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 SLU7O95391 586 aaKnown RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 KRT32Q14532 448 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 MNS1Q8NEH6 495 aa11.98□□□□□ -0.49
CTCFL-206ENST00000426658 DBF4Q9UBU7 674 aaPredicted RBP11.98□□□□□ -0.49
CTCFL-206ENST00000426658 BIN1O00499 593 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 STK38Q15208 465 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 ZNF396Q96N95 335 aaPredicted RBP11.97□□□□□ -0.49
CTCFL-206ENST00000426658 USP16Q9Y5T5 823 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 TEX35Q5T0J7 233 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 SYNE3Q6ZMZ3 975 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 ERO1AQ96HE7 468 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 FLT4P35916 1363 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 SNW1Q13573 536 aaKnown RBP11.97□□□□□ -0.49
CTCFL-206ENST00000426658 ELF2Q15723 593 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 IL17REQ8NFR9 667 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 DDX41Q9UJV9 622 aaKnown RBP11.97□□□□□ -0.49
CTCFL-206ENST00000426658 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
CTCFL-206ENST00000426658 POLA2Q14181 598 aa11.96□□□□□ -0.49
CTCFL-206ENST00000426658 LRRC8AQ8IWT6 810 aa11.96□□□□□ -0.49
CTCFL-206ENST00000426658 ZSCAN16Q9H4T2 348 aaPredicted RBP11.96□□□□□ -0.49
CTCFL-206ENST00000426658 RPS6KB1P23443 525 aa11.96□□□□□ -0.49
CTCFL-206ENST00000426658 IL17RAQ96F46 866 aa11.96□□□□□ -0.49
CTCFL-206ENST00000426658 MAP3K5Q99683 1374 aa11.96□□□□□ -0.49
CTCFL-206ENST00000426658 GSDMDP57764 484 aa11.96□□□□□ -0.5
CTCFL-206ENST00000426658 UBE3BQ7Z3V4 1068 aa11.96□□□□□ -0.5
CTCFL-206ENST00000426658 PLA2G4DQ86XP0 818 aa11.96□□□□□ -0.5
CTCFL-206ENST00000426658 CPS1P31327 1500 aa11.96□□□□□ -0.5
CTCFL-206ENST00000426658 BMS1Q14692 1282 aaKnown RBP11.95□□□□□ -0.5
CTCFL-206ENST00000426658 RALYLQ86SE5 291 aaKnown RBP11.95□□□□□ -0.5
CTCFL-206ENST00000426658 ERCC4Q92889 916 aaPredicted RBP11.95□□□□□ -0.5
CTCFL-206ENST00000426658 ZBTB9Q96C00 473 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 TIGD1Q96MW7 591 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 HMG20BQ9P0W2 317 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 CALCOCO1Q9P1Z2 691 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 JAK2O60674 1132 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 SFPQP23246 707 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTCFL-206ENST00000426658 HAND2P61296 217 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 NECTIN1Q15223 517 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 CCDC129Q6ZRS4 1044 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 AOPEPQ8N6M6 819 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 PDILTQ8N807 584 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 FSIP1Q8NA03 581 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 NEK1Q96PY6 1258 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 NOL10Q9BSC4 688 aaKnown RBP11.95□□□□□ -0.5
CTCFL-206ENST00000426658 SNRKQ9NRH2 765 aa11.95□□□□□ -0.5
CTCFL-206ENST00000426658 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-206ENST00000426658 CCDC144BQ3MJ40 725 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 CCDC144CPQ8IYA2 1237 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 UBXN4Q92575 508 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 POLR3DP05423 398 aaPredicted RBP11.94□□□□□ -0.5
CTCFL-206ENST00000426658 HOXC9P31274 260 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 ARID5BQ14865 1188 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
CTCFL-206ENST00000426658 TMC6Q7Z403 805 aa11.94□□□□□ -0.5
CTCFL-206ENST00000426658 MAP4K1Q92918 833 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms