RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 DNTTIP2Q5QJE6 756 aaKnown RBP15.48■□□□□ 0.07
COL12A1-205ENST00000425443 TMEM87AQ8NBN3 555 aa15.48■□□□□ 0.07
COL12A1-205ENST00000425443 EDC3Q96F86 508 aaKnown RBP15.48■□□□□ 0.07
COL12A1-205ENST00000425443 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.48■□□□□ 0.07
COL12A1-205ENST00000425443 AP5Z1O43299 807 aa15.48■□□□□ 0.07
COL12A1-205ENST00000425443 IRX3P78415 501 aaPredicted RBP15.48■□□□□ 0.07
COL12A1-205ENST00000425443 TOM1L2Q6ZVM7 507 aa15.48■□□□□ 0.07
COL12A1-205ENST00000425443 RGS22Q8NE09 1264 aa15.48■□□□□ 0.07
COL12A1-205ENST00000425443 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
COL12A1-205ENST00000425443 PRDM11Q9NQV5 511 aa15.47■□□□□ 0.07
COL12A1-205ENST00000425443 PDRG1Q9NUG6 133 aa15.47■□□□□ 0.07
COL12A1-205ENST00000425443 CYP46A1Q9Y6A2 500 aa15.47■□□□□ 0.07
COL12A1-205ENST00000425443 KDM6AO15550 1401 aaPredicted RBP15.47■□□□□ 0.07
COL12A1-205ENST00000425443 A0A087WZG4 1122 aa15.47■□□□□ 0.07
COL12A1-205ENST00000425443 F13A1P00488 732 aa15.47■□□□□ 0.07
COL12A1-205ENST00000425443 DNM1Q05193 864 aaKnown RBP15.47■□□□□ 0.07
COL12A1-205ENST00000425443 TRPM3Q9HCF6 1732 aaPredicted RBP15.47■□□□□ 0.07
COL12A1-205ENST00000425443 MST1RQ04912 1400 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 HSPA2P54652 639 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 STK3Q13188 491 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 FAM173BQ6P4H8 233 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 GIMAP6Q6P9H5 292 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 SMAP1Q8IYB5 467 aaPredicted RBP15.46■□□□□ 0.07
COL12A1-205ENST00000425443 TTC12Q9H892 705 aaPredicted RBP15.46■□□□□ 0.07
COL12A1-205ENST00000425443 TAF6LQ9Y6J9 622 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 MEGF6O75095 1541 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 GJB2P29033 226 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 TERF1P54274 439 aa15.46■□□□□ 0.07
COL12A1-205ENST00000425443 SYAP1Q96A49 352 aaPredicted RBP15.46■□□□□ 0.07
COL12A1-205ENST00000425443 UTYO14607 1347 aa15.46■□□□□ 0.06
COL12A1-205ENST00000425443 NMIQ13287 307 aaPredicted RBP15.46■□□□□ 0.06
COL12A1-205ENST00000425443 EPHA10Q5JZY3 1008 aa15.46■□□□□ 0.06
COL12A1-205ENST00000425443 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.06
COL12A1-205ENST00000425443 MTMR6Q9Y217 621 aa15.45■□□□□ 0.06
COL12A1-205ENST00000425443 ADCY5O95622 1261 aa15.45■□□□□ 0.06
COL12A1-205ENST00000425443 MCM5P33992 734 aa15.45■□□□□ 0.06
COL12A1-205ENST00000425443 TSC1Q92574 1164 aa15.45■□□□□ 0.06
COL12A1-205ENST00000425443 RBM8AQ9Y5S9 174 aaKnown RBP15.45■□□□□ 0.06
COL12A1-205ENST00000425443 CCDC171Q6TFL3 1326 aa15.45■□□□□ 0.06
COL12A1-205ENST00000425443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.44■□□□□ 0.06
COL12A1-205ENST00000425443 ME3Q16798 604 aa15.44■□□□□ 0.06
COL12A1-205ENST00000425443 FUCA2Q9BTY2 467 aa15.44■□□□□ 0.06
COL12A1-205ENST00000425443 CHGBP05060 677 aa15.44■□□□□ 0.06
COL12A1-205ENST00000425443 RNF20Q5VTR2 975 aa15.43■□□□□ 0.06
COL12A1-205ENST00000425443 ZNF330Q9Y3S2 320 aaPredicted RBP15.43■□□□□ 0.06
COL12A1-205ENST00000425443 TNS3Q68CZ2 1445 aa15.43■□□□□ 0.06
COL12A1-205ENST00000425443 PPFIA3O75145 1194 aa15.43■□□□□ 0.06
COL12A1-205ENST00000425443 UBE2HP62256 183 aa15.43■□□□□ 0.06
COL12A1-205ENST00000425443 DNAJC2Q99543 621 aaKnown RBP15.43■□□□□ 0.06
COL12A1-205ENST00000425443 SPATA31A3Q5VYP0 1347 aa15.43■□□□□ 0.06
COL12A1-205ENST00000425443 FAM177BA6PVY3 158 aa15.43■□□□□ 0.06
COL12A1-205ENST00000425443 TPCN1Q9ULQ1 816 aa15.43■□□□□ 0.06
COL12A1-205ENST00000425443 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
COL12A1-205ENST00000425443 TFCP2Q12800 502 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 PHF14O94880 888 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 PSMA5P28066 241 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 FOSBP53539 338 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 NECTIN1Q15223 517 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 CREB3L3Q68CJ9 461 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 ZCRB1Q8TBF4 217 aaKnown RBP15.42■□□□□ 0.06
COL12A1-205ENST00000425443 ZSWIM6Q9HCJ5 1215 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 STRN4Q9NRL3 753 aa15.42■□□□□ 0.06
COL12A1-205ENST00000425443 KIAA2012Q0VF49 1180 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 VPS53Q5VIR6 699 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 A0A0D9SFI3 127 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 CHMP4CQ96CF2 233 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 ZSCAN31Q96LW9 406 aaPredicted RBP15.41■□□□□ 0.06
COL12A1-205ENST00000425443 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 ATP6V1DQ9Y5K8 247 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 HSP90B1P14625 803 aaKnown RBP15.41■□□□□ 0.06
COL12A1-205ENST00000425443 EVA1CP58658 441 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 CSPP1Q1MSJ5 1256 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 SASS6Q6UVJ0 657 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 LMBR1LQ6UX01 489 aa15.41■□□□□ 0.06
COL12A1-205ENST00000425443 CAMK4Q16566 473 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 ALS2Q96Q42 1657 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 APPP05067 770 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 TNNI3KQ59H18 835 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 BLOC1S2Q6QNY1 142 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 CDC37L1Q7L3B6 337 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 COPRSQ9NQ92 184 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 SH2B1Q9NRF2 756 aaPredicted RBP15.4■□□□□ 0.06
COL12A1-205ENST00000425443 FPGT-TNNI3KV9GXZ4 949 aa15.4■□□□□ 0.06
COL12A1-205ENST00000425443 CAMTA1Q9Y6Y1 1673 aa15.39■□□□□ 0.06
COL12A1-205ENST00000425443 PTPN12Q05209 780 aaKnown RBP15.39■□□□□ 0.05
COL12A1-205ENST00000425443 KCNB2Q92953 911 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 SIPA1L3O60292 1781 aaPredicted RBP15.39■□□□□ 0.05
COL12A1-205ENST00000425443 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
COL12A1-205ENST00000425443 MAP4K1Q92918 833 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 ZBTB9Q96C00 473 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 TM6SF1Q9BZW5 370 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 ZBTB3Q9H5J0 574 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 PCDH11XQ9BZA7 1347 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 PCDH11YQ9BZA8 1340 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 KDM4AO75164 1064 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 LRRC2Q9BYS8 371 aa15.39■□□□□ 0.05
COL12A1-205ENST00000425443 KCNF1Q9H3M0 494 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms