RNA–Protein interactions for RNA: ENST00000425031.1

LINC00278-201, long intergenic non-protein coding RNA 278, humanhuman

TSL 2 BASIC

Gene LINC00278, Length 528 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00278-201ENST00000425031 C10orf71Q711Q0 1435 aa18.34■□□□□ 0.53
LINC00278-201ENST00000425031 SF3B3Q15393 1217 aaKnown RBP18.34■□□□□ 0.53
LINC00278-201ENST00000425031 LMBR1LQ6UX01 489 aa18.34■□□□□ 0.53
LINC00278-201ENST00000425031 RTL9Q8NET4 1388 aa18.33■□□□□ 0.53
LINC00278-201ENST00000425031 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
LINC00278-201ENST00000425031 POLD1P28340 1107 aa18.33■□□□□ 0.52
LINC00278-201ENST00000425031 PTGER2P43116 358 aa18.33■□□□□ 0.52
LINC00278-201ENST00000425031 POLA2Q14181 598 aa18.33■□□□□ 0.52
LINC00278-201ENST00000425031 SSH3Q8TE77 659 aa18.33■□□□□ 0.52
LINC00278-201ENST00000425031 NLRP3Q96P20 1036 aa18.33■□□□□ 0.52
LINC00278-201ENST00000425031 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
LINC00278-201ENST00000425031 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
LINC00278-201ENST00000425031 PPP4R2Q9NY27 417 aa18.32■□□□□ 0.52
LINC00278-201ENST00000425031 GTF3C3Q9Y5Q9 886 aa18.32■□□□□ 0.52
LINC00278-201ENST00000425031 CACNA1SQ13698 1873 aa18.32■□□□□ 0.52
LINC00278-201ENST00000425031 COL4A1P02462 1669 aa18.31■□□□□ 0.52
LINC00278-201ENST00000425031 SRGAP3O43295 1099 aa18.31■□□□□ 0.52
LINC00278-201ENST00000425031 RFX5P48382 616 aaPredicted RBP18.31■□□□□ 0.52
LINC00278-201ENST00000425031 HDAC1Q13547 482 aaPredicted RBP18.31■□□□□ 0.52
LINC00278-201ENST00000425031 CRY2Q49AN0 593 aa18.31■□□□□ 0.52
LINC00278-201ENST00000425031 GREM2Q9H772 168 aa18.31■□□□□ 0.52
LINC00278-201ENST00000425031 LRP5O75197 1615 aa18.31■□□□□ 0.52
LINC00278-201ENST00000425031 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
LINC00278-201ENST00000425031 CCDC152Q4G0S7 254 aa18.3■□□□□ 0.52
LINC00278-201ENST00000425031 A0A1B0GUL6 1792 aa18.3■□□□□ 0.52
LINC00278-201ENST00000425031 BRCA1P38398 1863 aaKnown RBP18.29■□□□□ 0.52
LINC00278-201ENST00000425031 HMMRO75330 724 aa18.29■□□□□ 0.52
LINC00278-201ENST00000425031 CCDC85AQ96PX6 553 aaPredicted RBP18.29■□□□□ 0.52
LINC00278-201ENST00000425031 SPON1Q9HCB6 807 aa18.29■□□□□ 0.52
LINC00278-201ENST00000425031 CHMP3Q9Y3E7 222 aa18.29■□□□□ 0.52
LINC00278-201ENST00000425031 IGHDP01880 384 aa18.28■□□□□ 0.52
LINC00278-201ENST00000425031 ITGA6P23229 1130 aa18.28■□□□□ 0.52
LINC00278-201ENST00000425031 PDE6BP35913 854 aa18.28■□□□□ 0.52
LINC00278-201ENST00000425031 IFIT5Q13325 482 aaKnown RBP18.27■□□□□ 0.52
LINC00278-201ENST00000425031 CCDC57Q2TAC2 916 aa18.27■□□□□ 0.52
LINC00278-201ENST00000425031 RWDD1Q9H446 243 aaPredicted RBP18.27■□□□□ 0.52
LINC00278-201ENST00000425031 COPRSQ9NQ92 184 aa18.27■□□□□ 0.52
LINC00278-201ENST00000425031 ANKRD18BA2A2Z9 1011 aa18.26■□□□□ 0.51
LINC00278-201ENST00000425031 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
LINC00278-201ENST00000425031 PTPN12Q05209 780 aaKnown RBP18.26■□□□□ 0.51
LINC00278-201ENST00000425031 CCDC136Q96JN2 1154 aa18.26■□□□□ 0.51
LINC00278-201ENST00000425031 SEC31BQ9NQW1 1179 aa18.26■□□□□ 0.51
LINC00278-201ENST00000425031 PDZRN3Q9UPQ7 1066 aa18.26■□□□□ 0.51
LINC00278-201ENST00000425031 SRGNP10124 158 aa18.25■□□□□ 0.51
LINC00278-201ENST00000425031 B4GALNT3Q6L9W6 998 aa18.25■□□□□ 0.51
LINC00278-201ENST00000425031 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
LINC00278-201ENST00000425031 DCTPP1Q9H773 170 aa18.25■□□□□ 0.51
LINC00278-201ENST00000425031 PA2G4Q9UQ80 394 aaKnown RBP18.25■□□□□ 0.51
LINC00278-201ENST00000425031 NOP58Q9Y2X3 529 aaKnown RBP18.25■□□□□ 0.51
LINC00278-201ENST00000425031 LRRC37AA6NMS7 1700 aa18.25■□□□□ 0.51
LINC00278-201ENST00000425031 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
LINC00278-201ENST00000425031 SLX4Q8IY92 1834 aa18.24■□□□□ 0.51
LINC00278-201ENST00000425031 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
LINC00278-201ENST00000425031 ZNF594Q96JF6 807 aaPredicted RBP18.24■□□□□ 0.51
LINC00278-201ENST00000425031 NPR1P16066 1061 aa18.23■□□□□ 0.51
LINC00278-201ENST00000425031 DDX46Q7L014 1031 aaKnown RBP18.23■□□□□ 0.51
LINC00278-201ENST00000425031 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
LINC00278-201ENST00000425031 SMC5Q8IY18 1101 aa18.23■□□□□ 0.51
LINC00278-201ENST00000425031 CRAMP1Q96RY5 1269 aa18.23■□□□□ 0.51
LINC00278-201ENST00000425031 CDC5LQ99459 802 aaKnown RBP18.23■□□□□ 0.51
LINC00278-201ENST00000425031 CD2APQ9Y5K6 639 aa18.23■□□□□ 0.51
LINC00278-201ENST00000425031 H0YIN7 160 aa18.22■□□□□ 0.51
LINC00278-201ENST00000425031 SURF6O75683 361 aaKnown RBP18.22■□□□□ 0.51
LINC00278-201ENST00000425031 CELF1Q92879 486 aaKnown RBP18.22■□□□□ 0.51
LINC00278-201ENST00000425031 MASTLQ96GX5 879 aa18.22■□□□□ 0.51
LINC00278-201ENST00000425031 RBM17Q96I25 401 aaKnown RBP18.22■□□□□ 0.51
LINC00278-201ENST00000425031 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
LINC00278-201ENST00000425031 CHRNA5P30532 468 aa18.21■□□□□ 0.51
LINC00278-201ENST00000425031 TGFB2P61812 414 aa18.21■□□□□ 0.51
LINC00278-201ENST00000425031 GRAPQ13588 217 aa18.21■□□□□ 0.51
LINC00278-201ENST00000425031 TAF7LQ5H9L4 462 aa18.21■□□□□ 0.51
LINC00278-201ENST00000425031 STYK1Q6J9G0 422 aa18.21■□□□□ 0.51
LINC00278-201ENST00000425031 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
LINC00278-201ENST00000425031 GCC1Q96CN9 775 aa18.21■□□□□ 0.51
LINC00278-201ENST00000425031 EXOC6BQ9Y2D4 811 aa18.21■□□□□ 0.51
LINC00278-201ENST00000425031 EYA2O00167 538 aa18.2■□□□□ 0.5
LINC00278-201ENST00000425031 CIAO1O76071 339 aa18.2■□□□□ 0.5
LINC00278-201ENST00000425031 IGHMBP2P38935 993 aaKnown RBP18.2■□□□□ 0.5
LINC00278-201ENST00000425031 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
LINC00278-201ENST00000425031 CENPQQ7L2Z9 268 aaPredicted RBP18.2■□□□□ 0.5
LINC00278-201ENST00000425031 ATG9AQ7Z3C6 839 aa18.2■□□□□ 0.5
LINC00278-201ENST00000425031 ANKRD18AQ8IVF6 992 aa18.2■□□□□ 0.5
LINC00278-201ENST00000425031 PUS3Q9BZE2 481 aaKnown RBP18.2■□□□□ 0.5
LINC00278-201ENST00000425031 SIL1Q9H173 461 aa18.2■□□□□ 0.5
LINC00278-201ENST00000425031 KCNA3P22001 575 aa18.19■□□□□ 0.5
LINC00278-201ENST00000425031 LTBP1Q14766 1721 aa18.19■□□□□ 0.5
LINC00278-201ENST00000425031 LRRC24Q50LG9 513 aa18.19■□□□□ 0.5
LINC00278-201ENST00000425031 HSP90AB4PQ58FF6 505 aa18.19■□□□□ 0.5
LINC00278-201ENST00000425031 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
LINC00278-201ENST00000425031 RIPOR2Q9Y4F9 1068 aa18.19■□□□□ 0.5
LINC00278-201ENST00000425031 RAB11FIP3O75154 756 aa18.18■□□□□ 0.5
LINC00278-201ENST00000425031 SASH1O94885 1247 aa18.18■□□□□ 0.5
LINC00278-201ENST00000425031 DPEP1P16444 411 aa18.18■□□□□ 0.5
LINC00278-201ENST00000425031 ALDH1B1P30837 517 aa18.18■□□□□ 0.5
LINC00278-201ENST00000425031 G3BP1Q13283 466 aaKnown RBP eCLIP18.18■□□□□ 0.5
LINC00278-201ENST00000425031 MPHOSPH8Q99549 860 aa18.18■□□□□ 0.5
LINC00278-201ENST00000425031 BSDC1Q9NW68 430 aaPredicted RBP18.18■□□□□ 0.5
LINC00278-201ENST00000425031 ARFGEF1Q9Y6D6 1849 aa18.17■□□□□ 0.5
LINC00278-201ENST00000425031 A0A0G2JLW4 131 aa18.17■□□□□ 0.5
LINC00278-201ENST00000425031 BBOX1O75936 387 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms