RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 COL9A3Q14050 684 aaPredicted RBP5.55□□□□□ -1.52
SF3B1-205ENST00000424674 SWI5Q1ZZU3 235 aa5.55□□□□□ -1.52
SF3B1-205ENST00000424674 C20orf204Q6ZNR8 217 aa5.55□□□□□ -1.52
SF3B1-205ENST00000424674 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.55□□□□□ -1.529e-8■■□□□ 13.7
SF3B1-205ENST00000424674 AMOTL2Q9Y2J4 779 aa5.55□□□□□ -1.52
SF3B1-205ENST00000424674 ACIN1Q9UKV3 1341 aaKnown RBP5.54□□□□□ -1.52
SF3B1-205ENST00000424674 FAM229AH3BQW9 127 aa5.54□□□□□ -1.52
SF3B1-205ENST00000424674 LILRB5O75023 590 aa5.54□□□□□ -1.52
SF3B1-205ENST00000424674 GRNP28799 593 aaKnown RBP5.54□□□□□ -1.52
SF3B1-205ENST00000424674 INPP5BP32019 993 aa5.54□□□□□ -1.52
SF3B1-205ENST00000424674 ELOAQ14241 798 aaKnown RBP5.54□□□□□ -1.52
SF3B1-205ENST00000424674 C11orf91Q3C1V1 193 aa5.54□□□□□ -1.52
SF3B1-205ENST00000424674 RETREG2Q8NC44 543 aa5.54□□□□□ -1.52
SF3B1-205ENST00000424674 IGFLR1Q9H665 355 aa5.54□□□□□ -1.52
SF3B1-205ENST00000424674 DNAJB12Q9NXW2 375 aaKnown RBP5.54□□□□□ -1.52
SF3B1-205ENST00000424674 ZMIZ1Q9ULJ6 1067 aa5.54□□□□□ -1.52
SF3B1-205ENST00000424674 MICAL2O94851 1124 aa5.53□□□□□ -1.52
SF3B1-205ENST00000424674 APBA3O96018 575 aa5.53□□□□□ -1.52
SF3B1-205ENST00000424674 FURINP09958 794 aa5.53□□□□□ -1.52
SF3B1-205ENST00000424674 FKBP5Q13451 457 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-205ENST00000424674 JPH1Q9HDC5 661 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-205ENST00000424674 NAGPAQ9UK23 515 aa5.53□□□□□ -1.52
SF3B1-205ENST00000424674 PRMT3O60678 531 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 BRD2P25440 801 aaKnown RBP5.52□□□□□ -1.53
SF3B1-205ENST00000424674 GATA4P43694 442 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 TRIM28Q13263 835 aaKnown RBP5.52□□□□□ -1.53
SF3B1-205ENST00000424674 PSAPL1Q6NUJ1 521 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 KRT25Q7Z3Z0 450 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 STK32AQ8WU08 396 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 NUDT8Q8WV74 236 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 PRIMPOLQ96LW4 560 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 NACC1Q96RE7 527 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 C11orf16Q9NQ32 467 aa5.52□□□□□ -1.53
SF3B1-205ENST00000424674 MAP3K6O95382 1288 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 RARAP10276 462 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 PCSK7Q16549 785 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 OCLNQ16625 522 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 TRAPPC3LQ5T215 181 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 IFT43Q96FT9 208 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 ZFATQ9P243 1243 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 LRFN2Q9ULH4 789 aa5.51□□□□□ -1.53
SF3B1-205ENST00000424674 RGS9O75916 674 aaPredicted RBP5.5□□□□□ -1.53
SF3B1-205ENST00000424674 ATG7O95352 703 aa5.5□□□□□ -1.53
SF3B1-205ENST00000424674 CANXP27824 592 aaKnown RBP5.5□□□□□ -1.53
SF3B1-205ENST00000424674 FAM69CQ0P6D2 419 aa5.5□□□□□ -1.53
SF3B1-205ENST00000424674 DOC2BQ14184 412 aa5.5□□□□□ -1.53
SF3B1-205ENST00000424674 COX20Q5RI15 118 aa5.5□□□□□ -1.53
SF3B1-205ENST00000424674 DHX32Q7L7V1 743 aaKnown RBP5.5□□□□□ -1.53
SF3B1-205ENST00000424674 FAM35AQ86V20 835 aa5.5□□□□□ -1.53
SF3B1-205ENST00000424674 TREML1Q86YW5 311 aa5.5□□□□□ -1.53
SF3B1-205ENST00000424674 POLR3GLQ9BT43 218 aa5.5□□□□□ -1.53
SF3B1-205ENST00000424674 A0A0A0MRY4 1105 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 OPLAHO14841 1288 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 PPP1R15AO75807 674 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 CPB1P15086 417 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 TARSP26639 723 aaKnown RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 ARID4AP29374 1257 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 AFF1P51825 1210 aaKnown RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 RAC1P63000 192 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 SRPK2P78362 688 aaKnown RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 GPLD1P80108 840 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 GRIK4Q16099 956 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 C16orf46Q6P387 395 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 RGL4Q8IZJ4 473 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 FAM177A1Q8N128 213 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 TRPM4Q8TD43 1214 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 COL26A1Q96A83 441 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 LPIN3Q9BQK8 851 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 FRRS1LQ9P0K9 344 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 CXXC1Q9P0U4 656 aaPredicted RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 USP20Q9Y2K6 914 aa5.49□□□□□ -1.53
SF3B1-205ENST00000424674 RTCBQ9Y3I0 505 aaKnown RBP5.49□□□□□ -1.53
SF3B1-205ENST00000424674 CARNS1A5YM72 827 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 SASH3O75995 380 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 EGFRP00533 1210 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 ELNP15502 786 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 MLLT1Q03111 559 aaPredicted RBP5.48□□□□□ -1.53
SF3B1-205ENST00000424674 KCNA1Q09470 495 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 TMEM164Q5U3C3 297 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 CMTR1Q8N1G2 835 aaKnown RBP5.48□□□□□ -1.53
SF3B1-205ENST00000424674 PBXIP1Q96AQ6 731 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 MKNK1Q9BUB5 465 aa5.48□□□□□ -1.53
SF3B1-205ENST00000424674 ZBTB42B2RXF5 422 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 C9orf172C9J069 976 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 XYLBO75191 536 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 NRLP54845 237 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 PERM1Q5SV97 790 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 ETFBKMTQ8IXQ9 262 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 SAP130Q9H0E3 1048 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 TPSG1Q9NRR2 321 aa5.47□□□□□ -1.53
SF3B1-205ENST00000424674 PTCD1O75127 700 aaKnown RBP5.46□□□□□ -1.54
SF3B1-205ENST00000424674 SELPP16109 830 aa5.46□□□□□ -1.54
SF3B1-205ENST00000424674 EIF2AK2P19525 551 aaKnown RBP5.46□□□□□ -1.54
SF3B1-205ENST00000424674 ADGRE1Q14246 886 aa5.46□□□□□ -1.54
SF3B1-205ENST00000424674 MSL1Q68DK7 614 aa5.46□□□□□ -1.54
SF3B1-205ENST00000424674 ELMSAN1Q6PJG2 1045 aa5.46□□□□□ -1.54
SF3B1-205ENST00000424674 DMRTC2Q8IXT2 367 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-205ENST00000424674 FMR1NBQ8N0W7 255 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-205ENST00000424674 CLP1Q92989 425 aaKnown RBP5.46□□□□□ -1.54
SF3B1-205ENST00000424674 SEMA6BQ9H3T3 888 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms