RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 SMIM23A6NLE4 172 aa12.69□□□□□ -0.38
TNC-203ENST00000423613 RFC4P35249 363 aa12.69□□□□□ -0.38
TNC-203ENST00000423613 SLF2Q8IX21 1173 aa12.69□□□□□ -0.38
TNC-203ENST00000423613 TSNARE1Q96NA8 513 aa12.69□□□□□ -0.38
TNC-203ENST00000423613 ZNF354CQ86Y25 554 aa12.69□□□□□ -0.38
TNC-203ENST00000423613 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
TNC-203ENST00000423613 TNPO1Q92973 898 aaKnown RBP12.69□□□□□ -0.38
TNC-203ENST00000423613 TSPYL2Q9H2G4 693 aaPredicted RBP12.69□□□□□ -0.38
TNC-203ENST00000423613 RANBP6O60518 1105 aaKnown RBP12.69□□□□□ -0.38
TNC-203ENST00000423613 CEP85LQ5SZL2 805 aa12.69□□□□□ -0.38
TNC-203ENST00000423613 MPHOSPH6Q99547 160 aaKnown RBP12.69□□□□□ -0.38
TNC-203ENST00000423613 SCAND2PQ9GZW5 306 aaPredicted RBP12.69□□□□□ -0.38
TNC-203ENST00000423613 EXOC5O00471 708 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 SH2B1Q9NRF2 756 aaPredicted RBP12.68□□□□□ -0.38
TNC-203ENST00000423613 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
TNC-203ENST00000423613 CCDC8Q9H0W5 538 aaPredicted RBP12.68□□□□□ -0.38
TNC-203ENST00000423613 GBP1P32455 592 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
TNC-203ENST00000423613 C8orf76Q96K31 380 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 POLA1P09884 1462 aaPredicted RBP12.68□□□□□ -0.38
TNC-203ENST00000423613 NOP2P46087 812 aaKnown RBP12.68□□□□□ -0.38
TNC-203ENST00000423613 VPS36Q86VN1 386 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 CCDC82Q8N4S0 544 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 DNAI1Q9UI46 699 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 SAMM50Q9Y512 469 aa12.68□□□□□ -0.38
TNC-203ENST00000423613 CTAGE15A4D2H0 777 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 CTAGE8P0CG41 777 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 CTAGE6Q86UF2 777 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 CTAGE4Q8IX94 777 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 ST5P78524 1137 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
TNC-203ENST00000423613 MAP7D1Q3KQU3 841 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 TSG101Q99816 390 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 TPX2Q9ULW0 747 aaKnown RBP12.67□□□□□ -0.38
TNC-203ENST00000423613 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 SLC5A1P13866 664 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 PEX19P40855 299 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 SETDB1Q15047 1291 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 CACNA2D3Q8IZS8 1091 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 KCNH5Q8NCM2 988 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 TBC1D2Q9BYX2 928 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 NAPBQ9H115 298 aa12.67□□□□□ -0.38
TNC-203ENST00000423613 FRMD3A2A2Y4 597 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 BIN1O00499 593 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 ISM2Q6H9L7 571 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 FMNL3Q8IVF7 1028 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 PRXQ9BXM0 1461 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 PLEKHH1Q9ULM0 1364 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 NME9Q86XW9 330 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
TNC-203ENST00000423613 IQCGQ9H095 443 aaKnown RBP12.66□□□□□ -0.38
TNC-203ENST00000423613 CIB2O75838 187 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 SAMD15Q9P1V8 674 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 NAIPQ13075 1403 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 LRRC43Q8N309 656 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 GPTP24298 496 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 RABEP2Q9H5N1 569 aa12.66□□□□□ -0.38
TNC-203ENST00000423613 GOLGA1Q92805 767 aa12.65□□□□□ -0.38
TNC-203ENST00000423613 LIMCH1Q9UPQ0 1083 aa12.65□□□□□ -0.38
TNC-203ENST00000423613 CDK13Q14004 1512 aaKnown RBP12.65□□□□□ -0.38
TNC-203ENST00000423613 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
TNC-203ENST00000423613 VAT1LQ9HCJ6 419 aa12.65□□□□□ -0.38
TNC-203ENST00000423613 FAM76AQ8TAV0 307 aa12.65□□□□□ -0.38
TNC-203ENST00000423613 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
TNC-203ENST00000423613 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
TNC-203ENST00000423613 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 SLU7O95391 586 aaKnown RBP12.64□□□□□ -0.39
TNC-203ENST00000423613 INPP5BP32019 993 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 STX1AQ16623 288 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 KIAA0753Q2KHM9 967 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 LCA5Q86VQ0 697 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 HMGB1P09429 215 aaKnown RBP12.64□□□□□ -0.39
TNC-203ENST00000423613 IFIT5Q13325 482 aaKnown RBP12.64□□□□□ -0.39
TNC-203ENST00000423613 WHAMMP3Q1A5X7 153 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 LRPPRCP42704 1394 aaKnown RBP12.64□□□□□ -0.39
TNC-203ENST00000423613 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 PANK2Q9BZ23 570 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 RFX1P22670 979 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 U2AF2P26368 475 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNC-203ENST00000423613 CCT2P78371 535 aaKnown RBP12.64□□□□□ -0.39
TNC-203ENST00000423613 PRR16Q569H4 304 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 SLC12A7Q9Y666 1083 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 TMEM266Q2M3C6 531 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 CTCFLQ8NI51 663 aaPredicted RBP12.64□□□□□ -0.39
TNC-203ENST00000423613 SREK1Q8WXA9 508 aaKnown RBP12.64□□□□□ -0.39
TNC-203ENST00000423613 CAPZA3Q96KX2 299 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 VCX3BQ9H321 246 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 SNAPC4Q5SXM2 1469 aa12.64□□□□□ -0.39
TNC-203ENST00000423613 RHOXF2BP0C7M4 288 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 TRIM27P14373 513 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 BICD1Q96G01 975 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 RHOXF2Q9BQY4 288 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 KCNK9Q9NPC2 374 aa12.63□□□□□ -0.39
TNC-203ENST00000423613 ZNF213O14771 459 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms