RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 SFI1A8K8P3 1242 aa9.25□□□□□ -0.93
LINC00458-201ENST00000423442 APBA3O96018 575 aa9.25□□□□□ -0.93
LINC00458-201ENST00000423442 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
LINC00458-201ENST00000423442 ZMYM1Q5SVZ6 1142 aa9.25□□□□□ -0.93
LINC00458-201ENST00000423442 UCN2Q96RP3 112 aa9.25□□□□□ -0.93
LINC00458-201ENST00000423442 PHACTR1Q9C0D0 580 aa9.25□□□□□ -0.93
LINC00458-201ENST00000423442 TPSG1Q9NRR2 321 aa9.25□□□□□ -0.93
LINC00458-201ENST00000423442 KRTAP9-6A0A140TA67 174 aa9.24□□□□□ -0.93
LINC00458-201ENST00000423442 ARID3CA6NKF2 412 aa9.24□□□□□ -0.93
LINC00458-201ENST00000423442 C1orf53Q5VUE5 145 aa9.24□□□□□ -0.93
LINC00458-201ENST00000423442 PLEKHM2Q8IWE5 1019 aa9.24□□□□□ -0.93
LINC00458-201ENST00000423442 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
LINC00458-201ENST00000423442 RIMS1Q86UR5 1692 aaKnown RBP9.23□□□□□ -0.93
LINC00458-201ENST00000423442 NID1P14543 1247 aa9.23□□□□□ -0.93
LINC00458-201ENST00000423442 ATP1A2P50993 1020 aa9.23□□□□□ -0.93
LINC00458-201ENST00000423442 GRIK4Q16099 956 aa9.23□□□□□ -0.93
LINC00458-201ENST00000423442 NKAPLQ5M9Q1 402 aa9.23□□□□□ -0.93
LINC00458-201ENST00000423442 OGFOD1Q8N543 542 aa9.23□□□□□ -0.93
LINC00458-201ENST00000423442 TSEN2Q8NCE0 465 aaKnown RBP9.23□□□□□ -0.93
LINC00458-201ENST00000423442 SUSD3Q96L08 255 aa9.23□□□□□ -0.93
LINC00458-201ENST00000423442 RAD21O60216 631 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 HIRAP54198 1017 aaPredicted RBP9.22□□□□□ -0.93
LINC00458-201ENST00000423442 TYRO3Q06418 890 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 TRIM28Q13263 835 aaKnown RBP9.22□□□□□ -0.93
LINC00458-201ENST00000423442 NEUROD1Q13562 356 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 HDGFL1Q5TGJ6 251 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 POTEAQ6S8J7 498 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 ANKIB1Q9P2G1 1089 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 KCNH4Q9UQ05 1017 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 PHLDB1Q86UU1 1377 aa9.22□□□□□ -0.93
LINC00458-201ENST00000423442 ABCA9Q8IUA7 1624 aa9.21□□□□□ -0.93
LINC00458-201ENST00000423442 CTTNBP2Q8WZ74 1663 aa9.21□□□□□ -0.93
LINC00458-201ENST00000423442 KCNQ4P56696 695 aa9.21□□□□□ -0.94
LINC00458-201ENST00000423442 FOXD4L6Q3SYB3 417 aaPredicted RBP9.21□□□□□ -0.94
LINC00458-201ENST00000423442 FOXD4L3Q6VB84 417 aaPredicted RBP9.21□□□□□ -0.94
LINC00458-201ENST00000423442 BHMTQ93088 406 aa9.21□□□□□ -0.94
LINC00458-201ENST00000423442 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
LINC00458-201ENST00000423442 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.94
LINC00458-201ENST00000423442 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
LINC00458-201ENST00000423442 C21orf2O43822 256 aa9.2□□□□□ -0.94
LINC00458-201ENST00000423442 PPP1R12BO60237 982 aaPredicted RBP9.2□□□□□ -0.94
LINC00458-201ENST00000423442 ZNF594Q96JF6 807 aaPredicted RBP9.2□□□□□ -0.94
LINC00458-201ENST00000423442 ATP10BO94823 1461 aa9.2□□□□□ -0.94
LINC00458-201ENST00000423442 FRMPD1Q5SYB0 1578 aa9.2□□□□□ -0.94
LINC00458-201ENST00000423442 PALM3A6NDB9 673 aaPredicted RBP9.19□□□□□ -0.94
LINC00458-201ENST00000423442 ATP9BO43861 1147 aa9.19□□□□□ -0.94
LINC00458-201ENST00000423442 TBC1D8BQ0IIM8 1120 aa9.19□□□□□ -0.94
LINC00458-201ENST00000423442 LARGE2Q8N3Y3 721 aa9.19□□□□□ -0.94
LINC00458-201ENST00000423442 NEO1Q92859 1461 aa9.19□□□□□ -0.94
LINC00458-201ENST00000423442 M0R2N6 131 aa9.18□□□□□ -0.94
LINC00458-201ENST00000423442 DYRK3O43781 588 aa9.18□□□□□ -0.94
LINC00458-201ENST00000423442 DKK1O94907 266 aa9.18□□□□□ -0.94
LINC00458-201ENST00000423442 TRAPPC3LQ5T215 181 aa9.18□□□□□ -0.94
LINC00458-201ENST00000423442 ALDH16A1Q8IZ83 802 aa9.18□□□□□ -0.94
LINC00458-201ENST00000423442 IGFLR1Q9H665 355 aa9.18□□□□□ -0.94
LINC00458-201ENST00000423442 UBTFP17480 764 aaKnown RBP9.17□□□□□ -0.94
LINC00458-201ENST00000423442 SIX5Q8N196 739 aa9.17□□□□□ -0.94
LINC00458-201ENST00000423442 NACC1Q96RE7 527 aa9.17□□□□□ -0.94
LINC00458-201ENST00000423442 EEA1Q15075 1411 aa9.16□□□□□ -0.94
LINC00458-201ENST00000423442 ATAD2Q6PL18 1390 aa9.16□□□□□ -0.94
LINC00458-201ENST00000423442 LILRB5O75023 590 aa9.16□□□□□ -0.94
LINC00458-201ENST00000423442 PRKCSHP14314 528 aaPredicted RBP9.16□□□□□ -0.94
LINC00458-201ENST00000423442 BTLAQ7Z6A9 289 aa9.16□□□□□ -0.94
LINC00458-201ENST00000423442 NGLY1Q96IV0 654 aa9.16□□□□□ -0.94
LINC00458-201ENST00000423442 UBE2OQ9C0C9 1292 aaKnown RBP9.16□□□□□ -0.94
LINC00458-201ENST00000423442 ARHGEF40Q8TER5 1519 aa9.15□□□□□ -0.94
LINC00458-201ENST00000423442 RANGAP1P46060 587 aaPredicted RBP9.15□□□□□ -0.94
LINC00458-201ENST00000423442 NUDT8Q8WV74 236 aa9.15□□□□□ -0.94
LINC00458-201ENST00000423442 SCG3Q8WXD2 468 aaKnown RBP9.15□□□□□ -0.94
LINC00458-201ENST00000423442 C2orf49Q9BVC5 232 aaPredicted RBP9.15□□□□□ -0.94
LINC00458-201ENST00000423442 SLC6A14Q9UN76 642 aa9.15□□□□□ -0.94
LINC00458-201ENST00000423442 SPATA31D1Q6ZQQ2 1576 aa9.15□□□□□ -0.95
LINC00458-201ENST00000423442 RICTORQ6R327 1708 aa9.14□□□□□ -0.95
LINC00458-201ENST00000423442 SIGLEC1Q9BZZ2 1709 aa9.14□□□□□ -0.95
LINC00458-201ENST00000423442 SCO2A0A1W2PP80 73 aa9.14□□□□□ -0.95
LINC00458-201ENST00000423442 SELPP16109 830 aa9.14□□□□□ -0.95
LINC00458-201ENST00000423442 MLECQ14165 292 aa9.14□□□□□ -0.95
LINC00458-201ENST00000423442 JPH1Q9HDC5 661 aaPredicted RBP9.14□□□□□ -0.95
LINC00458-201ENST00000423442 A0A0A0MRY4 1105 aa9.13□□□□□ -0.95
LINC00458-201ENST00000423442 LGR5O75473 907 aa9.13□□□□□ -0.95
LINC00458-201ENST00000423442 PRSS36Q5K4E3 855 aa9.13□□□□□ -0.95
LINC00458-201ENST00000423442 RBM19Q9Y4C8 960 aaKnown RBP9.13□□□□□ -0.95
LINC00458-201ENST00000423442 FANCAO15360 1455 aa9.13□□□□□ -0.95
LINC00458-201ENST00000423442 DENND4BO75064 1496 aaPredicted RBP9.13□□□□□ -0.95
LINC00458-201ENST00000423442 POGZQ7Z3K3 1410 aa9.13□□□□□ -0.95
LINC00458-201ENST00000423442 C9orf172C9J069 976 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 RASA1P20936 1047 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 ADGRE1Q14246 886 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 MBTPS1Q14703 1052 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 SHISA2Q6UWI4 295 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 GAS2L2Q8NHY3 880 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 DNAJB12Q9NXW2 375 aaKnown RBP9.12□□□□□ -0.95
LINC00458-201ENST00000423442 PRXQ9BXM0 1461 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 FER1L4A9Z1Z3 1794 aa9.12□□□□□ -0.95
LINC00458-201ENST00000423442 ELNP15502 786 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 FLIIQ13045 1269 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 STAG2Q8N3U4 1231 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 GSX2Q9BZM3 304 aa9.11□□□□□ -0.95
LINC00458-201ENST00000423442 NAGPAQ9UK23 515 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms