RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 ME3Q16798 604 aa22.37■■□□□ 1.17
RAF1-203ENST00000423275 HS1BP3Q53T59 392 aa22.37■■□□□ 1.17
RAF1-203ENST00000423275 LMBR1LQ6UX01 489 aa22.37■■□□□ 1.17
RAF1-203ENST00000423275 DBNDD2Q9BQY9 259 aa22.36■■□□□ 1.17
RAF1-203ENST00000423275 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.36■■□□□ 1.17
RAF1-203ENST00000423275 PCDH11XQ9BZA7 1347 aa22.36■■□□□ 1.17
RAF1-203ENST00000423275 PCDH11YQ9BZA8 1340 aa22.36■■□□□ 1.17
RAF1-203ENST00000423275 ATP5JP18859 108 aa22.36■■□□□ 1.17
RAF1-203ENST00000423275 NECAB1Q8N987 351 aa22.36■■□□□ 1.17
RAF1-203ENST00000423275 COL15A1P39059 1388 aa22.36■■□□□ 1.17
RAF1-203ENST00000423275 LAMB4A4D0S4 1761 aa22.35■■□□□ 1.17
RAF1-203ENST00000423275 FIBPO43427 364 aa22.35■■□□□ 1.17
RAF1-203ENST00000423275 FOXO4P98177 505 aa22.35■■□□□ 1.17
RAF1-203ENST00000423275 TCEANC2Q96MN5 208 aa22.35■■□□□ 1.17
RAF1-203ENST00000423275 PARP4Q9UKK3 1724 aaKnown RBP22.35■■□□□ 1.17
RAF1-203ENST00000423275 ZSCAN31Q96LW9 406 aaPredicted RBP22.35■■□□□ 1.17
RAF1-203ENST00000423275 SH2B1Q9NRF2 756 aaPredicted RBP22.35■■□□□ 1.17
RAF1-203ENST00000423275 TPCN1Q9ULQ1 816 aa22.35■■□□□ 1.17
RAF1-203ENST00000423275 NOL7Q9UMY1 257 aaKnown RBP22.35■■□□□ 1.17
RAF1-203ENST00000423275 MTMR6Q9Y217 621 aa22.34■■□□□ 1.17
RAF1-203ENST00000423275 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
RAF1-203ENST00000423275 H7C1W4 665 aa22.34■■□□□ 1.17
RAF1-203ENST00000423275 PHF14O94880 888 aa22.34■■□□□ 1.17
RAF1-203ENST00000423275 COL5A2P05997 1499 aaPredicted RBP22.33■■□□□ 1.17
RAF1-203ENST00000423275 CHMP3Q9Y3E7 222 aa22.33■■□□□ 1.17
RAF1-203ENST00000423275 TAF5LO75529 589 aa22.33■■□□□ 1.16
RAF1-203ENST00000423275 DNAJC2Q99543 621 aaKnown RBP22.33■■□□□ 1.16
RAF1-203ENST00000423275 ZBTB3Q9H5J0 574 aa22.33■■□□□ 1.16
RAF1-203ENST00000423275 ERVV-2B6SEH9 535 aa22.32■■□□□ 1.16
RAF1-203ENST00000423275 DNM1Q05193 864 aaKnown RBP22.32■■□□□ 1.16
RAF1-203ENST00000423275 UBE2HP62256 183 aa22.32■■□□□ 1.16
RAF1-203ENST00000423275 SEC62Q99442 399 aaKnown RBP22.32■■□□□ 1.16
RAF1-203ENST00000423275 ATP6V1DQ9Y5K8 247 aa22.32■■□□□ 1.16
RAF1-203ENST00000423275 SOS2Q07890 1332 aaPredicted RBP22.32■■□□□ 1.16
RAF1-203ENST00000423275 KCPQ6ZWJ8 1503 aa22.32■■□□□ 1.16
RAF1-203ENST00000423275 JCADQ9P266 1359 aa22.31■■□□□ 1.16
RAF1-203ENST00000423275 VPS37CA5D8V6 355 aaPredicted RBP22.31■■□□□ 1.16
RAF1-203ENST00000423275 CCDC183Q5T5S1 534 aa22.31■■□□□ 1.16
RAF1-203ENST00000423275 STRN4Q9NRL3 753 aa22.31■■□□□ 1.16
RAF1-203ENST00000423275 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
RAF1-203ENST00000423275 CCDC129Q6ZRS4 1044 aa22.31■■□□□ 1.16
RAF1-203ENST00000423275 IL2RBP14784 551 aa22.3■■□□□ 1.16
RAF1-203ENST00000423275 NKX1-1Q15270 411 aaPredicted RBP22.3■■□□□ 1.16
RAF1-203ENST00000423275 ATG9AQ7Z3C6 839 aa22.3■■□□□ 1.16
RAF1-203ENST00000423275 CWC25Q9NXE8 425 aaPredicted RBP22.3■■□□□ 1.16
RAF1-203ENST00000423275 UBR2Q8IWV8 1755 aa22.3■■□□□ 1.16
RAF1-203ENST00000423275 DDX46Q7L014 1031 aaKnown RBP22.3■■□□□ 1.16
RAF1-203ENST00000423275 ZNF609O15014 1411 aa22.29■■□□□ 1.16
RAF1-203ENST00000423275 PSMA5P28066 241 aa22.29■■□□□ 1.16
RAF1-203ENST00000423275 BLOC1S2Q6QNY1 142 aa22.29■■□□□ 1.16
RAF1-203ENST00000423275 HAUS7Q99871 368 aa22.29■■□□□ 1.16
RAF1-203ENST00000423275 RNF20Q5VTR2 975 aa22.28■■□□□ 1.16
RAF1-203ENST00000423275 ZKSCAN5Q9Y2L8 839 aa22.28■■□□□ 1.16
RAF1-203ENST00000423275 OFD1O75665 1012 aa22.28■■□□□ 1.16
RAF1-203ENST00000423275 RPS6KB1P23443 525 aa22.28■■□□□ 1.16
RAF1-203ENST00000423275 SLFNL1Q499Z3 407 aa22.28■■□□□ 1.16
RAF1-203ENST00000423275 ZNF594Q96JF6 807 aaPredicted RBP22.28■■□□□ 1.16
RAF1-203ENST00000423275 CARD10Q9BWT7 1032 aa22.28■■□□□ 1.16
RAF1-203ENST00000423275 NUP188Q5SRE5 1749 aa22.28■■□□□ 1.16
RAF1-203ENST00000423275 TIMM10P62072 90 aa22.27■■□□□ 1.16
RAF1-203ENST00000423275 TOB2Q14106 344 aaPredicted RBP22.27■■□□□ 1.16
RAF1-203ENST00000423275 ZNF335Q9H4Z2 1342 aaPredicted RBP22.27■■□□□ 1.16
RAF1-203ENST00000423275 USPL1Q5W0Q7 1092 aa22.27■■□□□ 1.16
RAF1-203ENST00000423275 CCDC39Q9UFE4 941 aa22.27■■□□□ 1.16
RAF1-203ENST00000423275 TJP1Q07157 1748 aa22.26■■□□□ 1.15
RAF1-203ENST00000423275 ZNF500O60304 480 aaPredicted RBP22.26■■□□□ 1.15
RAF1-203ENST00000423275 LRRC24Q50LG9 513 aa22.26■■□□□ 1.15
RAF1-203ENST00000423275 NEUROD6Q96NK8 337 aa22.26■■□□□ 1.15
RAF1-203ENST00000423275 SHANK3Q9BYB0 1731 aa22.26■■□□□ 1.15
RAF1-203ENST00000423275 LARP1BQ659C4 914 aaKnown RBP22.26■■□□□ 1.15
RAF1-203ENST00000423275 TSGA10IPQ3SY00 556 aa22.25■■□□□ 1.15
RAF1-203ENST00000423275 CDC37L1Q7L3B6 337 aa22.25■■□□□ 1.15
RAF1-203ENST00000423275 HCLS1P14317 486 aaPredicted RBP22.25■■□□□ 1.15
RAF1-203ENST00000423275 FERMT3Q86UX7 667 aa22.25■■□□□ 1.15
RAF1-203ENST00000423275 CCDC191Q8NCU4 936 aa22.24■■□□□ 1.15
RAF1-203ENST00000423275 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
RAF1-203ENST00000423275 PAPPAQ13219 1627 aa22.24■■□□□ 1.15
RAF1-203ENST00000423275 EVA1CP58658 441 aa22.24■■□□□ 1.15
RAF1-203ENST00000423275 FAM173BQ6P4H8 233 aa22.24■■□□□ 1.15
RAF1-203ENST00000423275 FAM184AQ8NB25 1140 aa22.24■■□□□ 1.15
RAF1-203ENST00000423275 STK3Q13188 491 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 GIMAP6Q6P9H5 292 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 PUS3Q9BZE2 481 aaKnown RBP22.23■■□□□ 1.15
RAF1-203ENST00000423275 USP25Q9UHP3 1055 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 GOLIM4O00461 696 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 ANKRD1Q15327 319 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 MCMDC2Q4G0Z9 681 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.23■■□□□ 1.15
RAF1-203ENST00000423275 KBTBD3Q8NAB2 608 aa22.23■■□□□ 1.15
RAF1-203ENST00000423275 ZNF330Q9Y3S2 320 aaPredicted RBP22.23■■□□□ 1.15
RAF1-203ENST00000423275 LETM1O95202 739 aaPredicted RBP22.22■■□□□ 1.15
RAF1-203ENST00000423275 CSPP1Q1MSJ5 1256 aa22.22■■□□□ 1.15
RAF1-203ENST00000423275 ALDH8A1Q9H2A2 487 aaPredicted RBP22.22■■□□□ 1.15
RAF1-203ENST00000423275 PTMAP06454 111 aaKnown RBP22.21■■□□□ 1.15
RAF1-203ENST00000423275 CYP21A2P08686 494 aa22.21■■□□□ 1.15
RAF1-203ENST00000423275 ABCA3Q99758 1704 aa22.21■■□□□ 1.15
RAF1-203ENST00000423275 RFX7Q2KHR2 1363 aa22.21■■□□□ 1.15
RAF1-203ENST00000423275 EYA2O00167 538 aa22.2■■□□□ 1.15
RAF1-203ENST00000423275 IL15P40933 162 aaPredicted RBP22.2■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms