RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SCN11AQ9UI33 1791 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 CAMTA1Q9Y6Y1 1673 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 NPHP3Q7Z494 1330 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 TAF5LO75529 589 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 KRT85P78386 507 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 UBE3BQ7Z3V4 1068 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 ARID3AQ99856 593 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 METTL22Q9BUU2 404 aaPredicted RBP18.79■□□□□ 0.6
CDH1-202ENST00000422392 SNRKQ9NRH2 765 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 SASS6Q6UVJ0 657 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 ANKRD13DQ6ZTN6 518 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 VSIG10Q8N0Z9 540 aa18.79■□□□□ 0.6
CDH1-202ENST00000422392 JAK2O60674 1132 aa18.78■□□□□ 0.6
CDH1-202ENST00000422392 GLIPR1L2Q4G1C9 344 aa18.78■□□□□ 0.6
CDH1-202ENST00000422392 SPC24Q8NBT2 197 aa18.78■□□□□ 0.6
CDH1-202ENST00000422392 ADAMTS7Q9UKP4 1686 aa18.78■□□□□ 0.6
CDH1-202ENST00000422392 PTPN12Q05209 780 aaKnown RBP18.78■□□□□ 0.6
CDH1-202ENST00000422392 CKAP2LQ8IYA6 745 aa18.78■□□□□ 0.6
CDH1-202ENST00000422392 TRPM3Q9HCF6 1732 aaPredicted RBP18.77■□□□□ 0.6
CDH1-202ENST00000422392 NOLC1Q14978 699 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDH1-202ENST00000422392 SLFNL1Q499Z3 407 aa18.77■□□□□ 0.6
CDH1-202ENST00000422392 TNNI3KQ59H18 835 aa18.77■□□□□ 0.6
CDH1-202ENST00000422392 PIBF1Q8WXW3 757 aa18.77■□□□□ 0.6
CDH1-202ENST00000422392 LRRC2Q9BYS8 371 aa18.77■□□□□ 0.6
CDH1-202ENST00000422392 FPGT-TNNI3KV9GXZ4 949 aa18.77■□□□□ 0.6
CDH1-202ENST00000422392 PHKG2P15735 406 aa18.77■□□□□ 0.59
CDH1-202ENST00000422392 DDX11Q96FC9 970 aa18.77■□□□□ 0.59
CDH1-202ENST00000422392 DBNDD2Q9BQY9 259 aa18.77■□□□□ 0.59
CDH1-202ENST00000422392 RFX5P48382 616 aaPredicted RBP18.76■□□□□ 0.59
CDH1-202ENST00000422392 DDX46Q7L014 1031 aaKnown RBP18.76■□□□□ 0.59
CDH1-202ENST00000422392 LRP10Q7Z4F1 713 aa18.76■□□□□ 0.59
CDH1-202ENST00000422392 CCDC192P0DO97 292 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 ANKRD1Q15327 319 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 CABLES1Q8TDN4 633 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 TSC1Q92574 1164 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 NUP62CLQ9H1M0 184 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 COPRSQ9NQ92 184 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 DACT1Q9NYF0 836 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 MEGF6O75095 1541 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 ZNF609O15014 1411 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 TRHP20396 242 aaPredicted RBP18.75■□□□□ 0.59
CDH1-202ENST00000422392 SPATA32Q96LK8 384 aa18.75■□□□□ 0.59
CDH1-202ENST00000422392 PDCP20941 246 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 LUZP1Q86V48 1076 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 MRC1P22897 1456 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 JCADQ9P266 1359 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 A0A087WZG4 1122 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 ATP5JP18859 108 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 MAP3K11Q16584 847 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 Q6ZUG5 572 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 KCNF1Q9H3M0 494 aa18.74■□□□□ 0.59
CDH1-202ENST00000422392 CYP21A2P08686 494 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 TATP17735 454 aaPredicted RBP18.73■□□□□ 0.59
CDH1-202ENST00000422392 FOSBP53539 338 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 CHRNA2Q15822 529 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 TTC5Q8N0Z6 440 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 NEK1Q96PY6 1258 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 HMG20BQ9P0W2 317 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 PPFIA3O75145 1194 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 CSB-PGBD3P0DP91 1061 aa18.73■□□□□ 0.59
CDH1-202ENST00000422392 HSP90B1P14625 803 aaKnown RBP18.73■□□□□ 0.59
CDH1-202ENST00000422392 GOLGA6L4A6NEF3 574 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 TYRO3Q06418 890 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
CDH1-202ENST00000422392 LEO1Q8WVC0 666 aaPredicted RBP18.72■□□□□ 0.59
CDH1-202ENST00000422392 PYCARDQ9ULZ3 195 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 ELP1O95163 1332 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 ARFGEF2Q9Y6D5 1785 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 LAMA4Q16363 1823 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 DYNC1I1O14576 645 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 CYP27B1O15528 508 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 SNRPA1P09661 255 aaKnown RBP18.72■□□□□ 0.59
CDH1-202ENST00000422392 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 GTF3C6Q969F1 213 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 TNMDQ9H2S6 317 aa18.72■□□□□ 0.59
CDH1-202ENST00000422392 FAM177BA6PVY3 158 aa18.71■□□□□ 0.59
CDH1-202ENST00000422392 TSGA10IPQ3SY00 556 aa18.71■□□□□ 0.59
CDH1-202ENST00000422392 IFNL2Q8IZJ0 200 aa18.71■□□□□ 0.59
CDH1-202ENST00000422392 BRF1Q92994 677 aa18.71■□□□□ 0.59
CDH1-202ENST00000422392 ZNF142P52746 1687 aaPredicted RBP18.71■□□□□ 0.59
CDH1-202ENST00000422392 NR1I2O75469 434 aa18.71■□□□□ 0.59
CDH1-202ENST00000422392 CEBPZQ03701 1054 aaKnown RBP18.71■□□□□ 0.59
CDH1-202ENST00000422392 PGBD1Q96JS3 809 aa18.71■□□□□ 0.59
CDH1-202ENST00000422392 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
CDH1-202ENST00000422392 A0A0G2JLW4 131 aa18.7■□□□□ 0.58
CDH1-202ENST00000422392 ANO6Q4KMQ2 910 aa18.7■□□□□ 0.58
CDH1-202ENST00000422392 LMBR1LQ6UX01 489 aa18.7■□□□□ 0.58
CDH1-202ENST00000422392 FAM200AQ8TCP9 573 aa18.7■□□□□ 0.58
CDH1-202ENST00000422392 SCAND2PQ9GZW5 306 aaPredicted RBP18.7■□□□□ 0.58
CDH1-202ENST00000422392 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.7■□□□□ 0.58
CDH1-202ENST00000422392 STOX1Q6ZVD7 989 aa18.7■□□□□ 0.58
CDH1-202ENST00000422392 NEUROD6Q96NK8 337 aa18.7■□□□□ 0.58
CDH1-202ENST00000422392 RABL6Q3YEC7 729 aaPredicted RBP18.69■□□□□ 0.58
CDH1-202ENST00000422392 C1orf167Q5SNV9 1468 aa18.69■□□□□ 0.58
CDH1-202ENST00000422392 MCMDC2Q4G0Z9 681 aa18.69■□□□□ 0.58
CDH1-202ENST00000422392 BICD2Q8TD16 824 aa18.69■□□□□ 0.58
CDH1-202ENST00000422392 FGD1P98174 961 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 SCRN1Q12765 414 aa18.68■□□□□ 0.58
CDH1-202ENST00000422392 MYRIPQ8NFW9 859 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms