RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 RTL5Q5HYW3 569 aaPredicted RBP12.72□□□□□ -0.37
NF1-203ENST00000422121 STK31Q9BXU1 1019 aa12.72□□□□□ -0.37
NF1-203ENST00000422121 CHMP4AQ9BY43 222 aa12.72□□□□□ -0.37
NF1-203ENST00000422121 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
NF1-203ENST00000422121 COL4A1P02462 1669 aa12.72□□□□□ -0.37
NF1-203ENST00000422121 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
NF1-203ENST00000422121 LTBP3Q9NS15 1303 aa12.71□□□□□ -0.37
NF1-203ENST00000422121 LMNB1P20700 586 aa12.71□□□□□ -0.37
NF1-203ENST00000422121 ZNF526Q8TF50 670 aaPredicted RBP12.71□□□□□ -0.37
NF1-203ENST00000422121 LAMB2P55268 1798 aa12.71□□□□□ -0.38
NF1-203ENST00000422121 DDX60Q8IY21 1712 aaKnown RBP12.71□□□□□ -0.38
NF1-203ENST00000422121 ABCC4O15439 1325 aa12.7□□□□□ -0.38
NF1-203ENST00000422121 E9PSI1 815 aa12.7□□□□□ -0.38
NF1-203ENST00000422121 DDX58O95786 925 aaKnown RBP12.7□□□□□ -0.38
NF1-203ENST00000422121 SF3B3Q15393 1217 aaKnown RBP12.7□□□□□ -0.38
NF1-203ENST00000422121 CWF19L2Q2TBE0 894 aaKnown RBP12.7□□□□□ -0.38
NF1-203ENST00000422121 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
NF1-203ENST00000422121 CCDC191Q8NCU4 936 aa12.7□□□□□ -0.38
NF1-203ENST00000422121 RBM17Q96I25 401 aaKnown RBP12.7□□□□□ -0.38
NF1-203ENST00000422121 NEURL1BA8MQ27 555 aa12.69□□□□□ -0.38
NF1-203ENST00000422121 F6X3S4 739 aa12.69□□□□□ -0.38
NF1-203ENST00000422121 IRS4O14654 1257 aaPredicted RBP12.69□□□□□ -0.38
NF1-203ENST00000422121 ECM2O94769 699 aaPredicted RBP12.69□□□□□ -0.38
NF1-203ENST00000422121 PCCAP05165 728 aaPredicted RBP12.69□□□□□ -0.38
NF1-203ENST00000422121 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
NF1-203ENST00000422121 CWC25Q9NXE8 425 aaPredicted RBP12.69□□□□□ -0.38
NF1-203ENST00000422121 TAF1P21675 1872 aa12.69□□□□□ -0.38
NF1-203ENST00000422121 CCDC88AQ3V6T2 1871 aa12.68□□□□□ -0.38
NF1-203ENST00000422121 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
NF1-203ENST00000422121 KIF3CO14782 793 aa12.68□□□□□ -0.38
NF1-203ENST00000422121 CASP7P55210 303 aa12.68□□□□□ -0.38
NF1-203ENST00000422121 CCDC93Q567U6 631 aa12.68□□□□□ -0.38
NF1-203ENST00000422121 MRPL50Q8N5N7 158 aaKnown RBP12.68□□□□□ -0.38
NF1-203ENST00000422121 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
NF1-203ENST00000422121 TAOK3Q9H2K8 898 aa12.68□□□□□ -0.38
NF1-203ENST00000422121 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
NF1-203ENST00000422121 POTECB2RU33 542 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 H7C1W4 665 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 FKBP4Q02790 459 aaKnown RBP eCLIP12.67□□□□□ -0.38
NF1-203ENST00000422121 FKBP5Q13451 457 aaPredicted RBP12.67□□□□□ -0.38
NF1-203ENST00000422121 BEND3Q5T5X7 828 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 SOGA3Q5TF21 947 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 SSH1Q8WYL5 1049 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 GPBP1L1Q9HC44 474 aaPredicted RBP12.67□□□□□ -0.38
NF1-203ENST00000422121 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 SEC31BQ9NQW1 1179 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 ZNF277Q9NRM2 450 aaPredicted RBP12.67□□□□□ -0.38
NF1-203ENST00000422121 COL4A5P29400 1685 aa12.67□□□□□ -0.38
NF1-203ENST00000422121 PPEF1O14829 653 aaPredicted RBP12.66□□□□□ -0.38
NF1-203ENST00000422121 BBOX1O75936 387 aa12.66□□□□□ -0.38
NF1-203ENST00000422121 GRAPQ13588 217 aa12.66□□□□□ -0.38
NF1-203ENST00000422121 GCKRQ14397 625 aa12.66□□□□□ -0.38
NF1-203ENST00000422121 RTKN2Q8IZC4 609 aa12.66□□□□□ -0.38
NF1-203ENST00000422121 GRAPLQ8TC17 118 aaPredicted RBP12.66□□□□□ -0.38
NF1-203ENST00000422121 PSMD1Q99460 953 aa12.66□□□□□ -0.38
NF1-203ENST00000422121 CACNA1FO60840 1977 aa12.66□□□□□ -0.38
NF1-203ENST00000422121 CDHR2Q9BYE9 1310 aa12.65□□□□□ -0.38
NF1-203ENST00000422121 CC2D2BQ6DHV5 1058 aa12.65□□□□□ -0.38
NF1-203ENST00000422121 DDX46Q7L014 1031 aaKnown RBP12.65□□□□□ -0.38
NF1-203ENST00000422121 SP8Q8IXZ3 490 aa12.65□□□□□ -0.38
NF1-203ENST00000422121 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
NF1-203ENST00000422121 ZC3H4Q9UPT8 1303 aaKnown RBP12.64□□□□□ -0.39
NF1-203ENST00000422121 GLTPD2A6NH11 291 aa12.64□□□□□ -0.39
NF1-203ENST00000422121 PDE8AO60658 829 aa12.64□□□□□ -0.39
NF1-203ENST00000422121 TTLL11Q8NHH1 800 aa12.64□□□□□ -0.39
NF1-203ENST00000422121 DICER1Q9UPY3 1922 aaKnown RBP12.64□□□□□ -0.39
NF1-203ENST00000422121 C1QTNF8P60827 252 aa12.63□□□□□ -0.39
NF1-203ENST00000422121 NEXNQ0ZGT2 675 aa12.63□□□□□ -0.39
NF1-203ENST00000422121 CCDC85AQ96PX6 553 aaPredicted RBP12.63□□□□□ -0.39
NF1-203ENST00000422121 BCL2L13Q9BXK5 485 aa12.63□□□□□ -0.39
NF1-203ENST00000422121 RTFDC1Q9BY42 306 aaPredicted RBP12.63□□□□□ -0.39
NF1-203ENST00000422121 RRAGCQ9HB90 399 aa12.63□□□□□ -0.39
NF1-203ENST00000422121 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
NF1-203ENST00000422121 DUOX1Q9NRD9 1551 aa12.62□□□□□ -0.39
NF1-203ENST00000422121 FZD9O00144 591 aa12.62□□□□□ -0.39
NF1-203ENST00000422121 CSF1RP07333 972 aa12.62□□□□□ -0.39
NF1-203ENST00000422121 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
NF1-203ENST00000422121 RPS8P62241 208 aaKnown RBP12.62□□□□□ -0.39
NF1-203ENST00000422121 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
NF1-203ENST00000422121 PLA2G12BQ9BX93 195 aa12.62□□□□□ -0.39
NF1-203ENST00000422121 TIAM2Q8IVF5 1701 aa12.62□□□□□ -0.39
NF1-203ENST00000422121 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
NF1-203ENST00000422121 WTIPA6NIX2 430 aaPredicted RBP12.61□□□□□ -0.39
NF1-203ENST00000422121 DDNO94850 711 aaPredicted RBP12.61□□□□□ -0.39
NF1-203ENST00000422121 CTSWP56202 376 aa12.61□□□□□ -0.39
NF1-203ENST00000422121 FOXO4P98177 505 aa12.61□□□□□ -0.39
NF1-203ENST00000422121 ALDH1L2Q3SY69 923 aa12.61□□□□□ -0.39
NF1-203ENST00000422121 GRIPAP1Q4V328 841 aa12.61□□□□□ -0.39
NF1-203ENST00000422121 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
NF1-203ENST00000422121 KAZALD1Q96I82 304 aa12.61□□□□□ -0.39
NF1-203ENST00000422121 GREM2Q9H772 168 aa12.61□□□□□ -0.39
NF1-203ENST00000422121 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
NF1-203ENST00000422121 LRRC37AA6NMS7 1700 aa12.6□□□□□ -0.39
NF1-203ENST00000422121 GPSM2P81274 684 aa12.6□□□□□ -0.39
NF1-203ENST00000422121 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
NF1-203ENST00000422121 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
NF1-203ENST00000422121 MPNDQ8N594 471 aa12.6□□□□□ -0.39
NF1-203ENST00000422121 POLLQ9UGP5 575 aa12.6□□□□□ -0.39
NF1-203ENST00000422121 KDM2BQ8NHM5 1336 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms