RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 RANBP2P49792 3224 aaKnown RBP16.28■□□□□ 0.2
UFD1-203ENST00000421968 KIF7Q2M1P5 1343 aa16.27■□□□□ 0.2
UFD1-203ENST00000421968 PRAMEF22A3QJZ6 481 aa16.27■□□□□ 0.2
UFD1-203ENST00000421968 DPF2Q92785 391 aa16.26■□□□□ 0.19
UFD1-203ENST00000421968 NYXQ9GZU5 481 aa16.26■□□□□ 0.19
UFD1-203ENST00000421968 CENPFP49454 3210 aa16.26■□□□□ 0.19
UFD1-203ENST00000421968 FKBP1BP68106 108 aa16.25■□□□□ 0.19
UFD1-203ENST00000421968 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
UFD1-203ENST00000421968 TEFQ10587 303 aa16.25■□□□□ 0.19
UFD1-203ENST00000421968 ARMC5Q96C12 935 aa16.25■□□□□ 0.19
UFD1-203ENST00000421968 COL25A1Q9BXS0 654 aaPredicted RBP16.25■□□□□ 0.19
UFD1-203ENST00000421968 RTFDC1Q9BY42 306 aaPredicted RBP16.25■□□□□ 0.19
UFD1-203ENST00000421968 ATP6V0A2Q9Y487 856 aa16.25■□□□□ 0.19
UFD1-203ENST00000421968 YDJCA8MPS7 323 aa16.24■□□□□ 0.19
UFD1-203ENST00000421968 RGL2O15211 777 aa16.24■□□□□ 0.19
UFD1-203ENST00000421968 MTHFSDQ2M296 383 aaKnown RBP16.24■□□□□ 0.19
UFD1-203ENST00000421968 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
UFD1-203ENST00000421968 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
UFD1-203ENST00000421968 GGA3Q9NZ52 723 aa16.24■□□□□ 0.19
UFD1-203ENST00000421968 PTPN22Q9Y2R2 807 aa16.24■□□□□ 0.19
UFD1-203ENST00000421968 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
UFD1-203ENST00000421968 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
UFD1-203ENST00000421968 BRCA2P51587 3418 aa16.23■□□□□ 0.19
UFD1-203ENST00000421968 SREBF2Q12772 1141 aa16.23■□□□□ 0.19
UFD1-203ENST00000421968 MKRN3Q13064 507 aaKnown RBP16.23■□□□□ 0.19
UFD1-203ENST00000421968 HLFQ16534 295 aa16.23■□□□□ 0.19
UFD1-203ENST00000421968 UBE2Q2LH0YL09 131 aa16.22■□□□□ 0.19
UFD1-203ENST00000421968 IL13P35225 146 aa16.22■□□□□ 0.19
UFD1-203ENST00000421968 MOB2Q70IA6 237 aa16.22■□□□□ 0.19
UFD1-203ENST00000421968 PSMD14O00487 310 aa16.21■□□□□ 0.19
UFD1-203ENST00000421968 KIF4BQ2VIQ3 1234 aa16.21■□□□□ 0.19
UFD1-203ENST00000421968 MPNDQ8N594 471 aa16.21■□□□□ 0.19
UFD1-203ENST00000421968 ASTN2O75129 1339 aaPredicted RBP16.2■□□□□ 0.18
UFD1-203ENST00000421968 HMOX1P09601 288 aa16.2■□□□□ 0.18
UFD1-203ENST00000421968 SLC4A8Q2Y0W8 1093 aa16.2■□□□□ 0.18
UFD1-203ENST00000421968 DPF3Q92784 378 aa16.2■□□□□ 0.18
UFD1-203ENST00000421968 KCNQ3O43525 872 aa16.18■□□□□ 0.18
UFD1-203ENST00000421968 ALDH1A1P00352 501 aa16.18■□□□□ 0.18
UFD1-203ENST00000421968 RPS12P25398 132 aaKnown RBP16.18■□□□□ 0.18
UFD1-203ENST00000421968 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
UFD1-203ENST00000421968 SOX1O00570 391 aaPredicted RBP16.17■□□□□ 0.18
UFD1-203ENST00000421968 TTLL12Q14166 644 aaPredicted RBP16.17■□□□□ 0.18
UFD1-203ENST00000421968 IL17REQ8NFR9 667 aa16.17■□□□□ 0.18
UFD1-203ENST00000421968 ERO1AQ96HE7 468 aa16.17■□□□□ 0.18
UFD1-203ENST00000421968 LRCH3Q96II8 777 aa16.17■□□□□ 0.18
UFD1-203ENST00000421968 ZNF333Q96JL9 665 aa16.17■□□□□ 0.18
UFD1-203ENST00000421968 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
UFD1-203ENST00000421968 ANGEL2Q5VTE6 544 aaKnown RBP16.16■□□□□ 0.18
UFD1-203ENST00000421968 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
UFD1-203ENST00000421968 SP8Q8IXZ3 490 aa16.16■□□□□ 0.18
UFD1-203ENST00000421968 CD99L2Q8TCZ2 262 aa16.16■□□□□ 0.18
UFD1-203ENST00000421968 PRO3102Q9H379 93 aa16.16■□□□□ 0.18
UFD1-203ENST00000421968 EFCC1Q9HA90 598 aa16.16■□□□□ 0.18
UFD1-203ENST00000421968 GPTP24298 496 aa16.15■□□□□ 0.18
UFD1-203ENST00000421968 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
UFD1-203ENST00000421968 ABCC4O15439 1325 aa16.15■□□□□ 0.18
UFD1-203ENST00000421968 SIPA1L3O60292 1781 aaPredicted RBP16.14■□□□□ 0.17
UFD1-203ENST00000421968 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
UFD1-203ENST00000421968 MYCP01106 439 aaPredicted RBP16.14■□□□□ 0.17
UFD1-203ENST00000421968 SCARF1Q14162 830 aa16.14■□□□□ 0.17
UFD1-203ENST00000421968 NBPF11Q86T75 865 aa16.14■□□□□ 0.17
UFD1-203ENST00000421968 NLRP3Q96P20 1036 aa16.14■□□□□ 0.17
UFD1-203ENST00000421968 BBOX1O75936 387 aa16.13■□□□□ 0.17
UFD1-203ENST00000421968 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
UFD1-203ENST00000421968 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
UFD1-203ENST00000421968 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
UFD1-203ENST00000421968 UNC80Q8N2C7 3258 aa16.13■□□□□ 0.17
UFD1-203ENST00000421968 ZNF609O15014 1411 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 GNAT3A8MTJ3 354 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 SLC9C1Q4G0N8 1177 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 ANKRD13DQ6ZTN6 518 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 MORC1Q86VD1 984 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 PRDM6Q9NQX0 595 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 STXBP5LQ9Y2K9 1186 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 NUP98P52948 1817 aa16.12■□□□□ 0.17
UFD1-203ENST00000421968 IBTKQ9P2D0 1353 aaPredicted RBP16.12■□□□□ 0.17
UFD1-203ENST00000421968 A0A1W2PPC1 479 aa16.11■□□□□ 0.17
UFD1-203ENST00000421968 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
UFD1-203ENST00000421968 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
UFD1-203ENST00000421968 PRAMEF18Q5VWM3 479 aa16.11■□□□□ 0.17
UFD1-203ENST00000421968 NGEFQ8N5V2 710 aa16.11■□□□□ 0.17
UFD1-203ENST00000421968 KCNQ5Q9NR82 932 aa16.11■□□□□ 0.17
UFD1-203ENST00000421968 SCAF8Q9UPN6 1271 aaKnown RBP16.11■□□□□ 0.17
UFD1-203ENST00000421968 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
UFD1-203ENST00000421968 RIMBP2O15034 1052 aa16.1■□□□□ 0.17
UFD1-203ENST00000421968 IFNL1Q8IU54 200 aa16.1■□□□□ 0.17
UFD1-203ENST00000421968 DEFB123Q8N688 67 aa16.1■□□□□ 0.17
UFD1-203ENST00000421968 RTL9Q8NET4 1388 aa16.1■□□□□ 0.17
UFD1-203ENST00000421968 ERVV-1B6SEH8 477 aa16.09■□□□□ 0.17
UFD1-203ENST00000421968 NTSR2O95665 410 aa16.09■□□□□ 0.17
UFD1-203ENST00000421968 SPRYD7Q5W111 196 aa16.09■□□□□ 0.17
UFD1-203ENST00000421968 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.09■□□□□ 0.17
UFD1-203ENST00000421968 POLR3GLQ9BT43 218 aa16.09■□□□□ 0.17
UFD1-203ENST00000421968 LAMA3Q16787 3333 aa16.09■□□□□ 0.17
UFD1-203ENST00000421968 MANSC4A6NHS7 340 aaPredicted RBP16.08■□□□□ 0.16
UFD1-203ENST00000421968 ECE2O60344 883 aa16.08■□□□□ 0.16
UFD1-203ENST00000421968 NF2P35240 595 aa16.08■□□□□ 0.16
UFD1-203ENST00000421968 INHBEP58166 350 aa16.08■□□□□ 0.16
UFD1-203ENST00000421968 PTPN12Q05209 780 aaKnown RBP16.08■□□□□ 0.16
UFD1-203ENST00000421968 NR2E3Q9Y5X4 410 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms