RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 YBX3P16989 372 aaKnown RBP eCLIP9.12□□□□□ -0.951e-13■■□□□ 11.5
SFXN1-202ENST00000421887 TRIM50Q86XT4 487 aa9.12□□□□□ -0.95
SFXN1-202ENST00000421887 WFDC8Q8IUA0 241 aa9.12□□□□□ -0.95
SFXN1-202ENST00000421887 ALDH16A1Q8IZ83 802 aa9.12□□□□□ -0.95
SFXN1-202ENST00000421887 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
SFXN1-202ENST00000421887 TDRD9Q8NDG6 1382 aaKnown RBP9.12□□□□□ -0.95
SFXN1-202ENST00000421887 POLA1P09884 1462 aaPredicted RBP9.11□□□□□ -0.95
SFXN1-202ENST00000421887 FSTP19883 344 aa9.11□□□□□ -0.95
SFXN1-202ENST00000421887 CCINQ13939 588 aa9.11□□□□□ -0.95
SFXN1-202ENST00000421887 NFATC2IPQ8NCF5 419 aa9.11□□□□□ -0.95
SFXN1-202ENST00000421887 BCANQ96GW7 911 aa9.11□□□□□ -0.95
SFXN1-202ENST00000421887 NGLY1Q96IV0 654 aa9.11□□□□□ -0.95
SFXN1-202ENST00000421887 MAGI1Q96QZ7 1491 aaPredicted RBP9.1□□□□□ -0.95
SFXN1-202ENST00000421887 ZBTB7BO15156 539 aaPredicted RBP9.1□□□□□ -0.95
SFXN1-202ENST00000421887 WDR97A6NE52 1622 aa9.09□□□□□ -0.95
SFXN1-202ENST00000421887 SOGA1O94964 1423 aa9.09□□□□□ -0.95
SFXN1-202ENST00000421887 PCSK7Q16549 785 aa9.09□□□□□ -0.95
SFXN1-202ENST00000421887 HIF1AQ16665 826 aa9.09□□□□□ -0.95
SFXN1-202ENST00000421887 ELMSAN1Q6PJG2 1045 aa9.09□□□□□ -0.95
SFXN1-202ENST00000421887 LPIN3Q9BQK8 851 aa9.09□□□□□ -0.95
SFXN1-202ENST00000421887 RAD54L2Q9Y4B4 1467 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 KIF13AQ9H1H9 1805 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 ATP1A2P50993 1020 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 PLAURQ03405 335 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 GRIK5Q16478 980 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 PERM1Q5SV97 790 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 POTEAQ6S8J7 498 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 TSEN2Q8NCE0 465 aaKnown RBP9.08□□□□□ -0.96
SFXN1-202ENST00000421887 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 ALG2Q9H553 416 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 SYNJ2O15056 1496 aa9.08□□□□□ -0.96
SFXN1-202ENST00000421887 ALX3O95076 343 aa9.07□□□□□ -0.96
SFXN1-202ENST00000421887 CLDN10P78369 228 aa9.07□□□□□ -0.96
SFXN1-202ENST00000421887 MLLT1Q03111 559 aaPredicted RBP9.07□□□□□ -0.96
SFXN1-202ENST00000421887 KRT25Q7Z3Z0 450 aa9.07□□□□□ -0.96
SFXN1-202ENST00000421887 AKTIPQ9H8T0 292 aa9.07□□□□□ -0.96
SFXN1-202ENST00000421887 TAL1P17542 331 aaPredicted RBP9.06□□□□□ -0.96
SFXN1-202ENST00000421887 CD97P48960 835 aa9.06□□□□□ -0.96
SFXN1-202ENST00000421887 SLC51AQ86UW1 340 aa9.06□□□□□ -0.96
SFXN1-202ENST00000421887 FRRS1LQ9P0K9 344 aa9.06□□□□□ -0.96
SFXN1-202ENST00000421887 GRIN2BQ13224 1484 aa9.06□□□□□ -0.96
SFXN1-202ENST00000421887 DEAF1O75398 565 aaPredicted RBP9.05□□□□□ -0.96
SFXN1-202ENST00000421887 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
SFXN1-202ENST00000421887 ATAD2Q6PL18 1390 aa9.04□□□□□ -0.96
SFXN1-202ENST00000421887 ZBTB42B2RXF5 422 aa9.04□□□□□ -0.96
SFXN1-202ENST00000421887 C21orf2O43822 256 aa9.04□□□□□ -0.96
SFXN1-202ENST00000421887 PTCD1O75127 700 aaKnown RBP9.04□□□□□ -0.96
SFXN1-202ENST00000421887 DHX32Q7L7V1 743 aaKnown RBP9.04□□□□□ -0.96
SFXN1-202ENST00000421887 RBM19Q9Y4C8 960 aaKnown RBP9.04□□□□□ -0.96
SFXN1-202ENST00000421887 RNF114Q9Y508 228 aa9.04□□□□□ -0.96
SFXN1-202ENST00000421887 OAS3Q9Y6K5 1087 aaKnown RBP9.04□□□□□ -0.96
SFXN1-202ENST00000421887 PBRM1Q86U86 1689 aa9.04□□□□□ -0.96
SFXN1-202ENST00000421887 EPB42P16452 691 aa9.03□□□□□ -0.96
SFXN1-202ENST00000421887 HFE2Q6ZVN8 426 aa9.03□□□□□ -0.96
SFXN1-202ENST00000421887 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
SFXN1-202ENST00000421887 SCG3Q8WXD2 468 aaKnown RBP9.03□□□□□ -0.96
SFXN1-202ENST00000421887 SMG9Q9H0W8 520 aaKnown RBP9.03□□□□□ -0.96
SFXN1-202ENST00000421887 M0R2N6 131 aa9.02□□□□□ -0.97
SFXN1-202ENST00000421887 DLL1O00548 723 aa9.02□□□□□ -0.97
SFXN1-202ENST00000421887 GP2P55259 537 aaKnown RBP9.02□□□□□ -0.97
SFXN1-202ENST00000421887 ZNF594Q96JF6 807 aaPredicted RBP9.02□□□□□ -0.97
SFXN1-202ENST00000421887 C2orf49Q9BVC5 232 aaPredicted RBP9.02□□□□□ -0.97
SFXN1-202ENST00000421887 ZFATQ9P243 1243 aa9.02□□□□□ -0.97
SFXN1-202ENST00000421887 USP17L3A6NCW0 530 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 USP17L4A6NCW7 530 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 PALM3A6NDB9 673 aaPredicted RBP9.01□□□□□ -0.97
SFXN1-202ENST00000421887 TGFBR3LH3BV60 316 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 MED26O95402 600 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 TARSP26639 723 aaKnown RBP9.01□□□□□ -0.97
SFXN1-202ENST00000421887 IER5Q5VY09 327 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 USP17L2Q6R6M4 530 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 USP17L1Q7RTZ2 530 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 LARGE2Q8N3Y3 721 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 TRPM4Q8TD43 1214 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
SFXN1-202ENST00000421887 FGD5Q6ZNL6 1462 aa9.01□□□□□ -0.97
SFXN1-202ENST00000421887 MAP3K6O95382 1288 aa9□□□□□ -0.97
SFXN1-202ENST00000421887 FAM69CQ0P6D2 419 aa9□□□□□ -0.97
SFXN1-202ENST00000421887 TTC9Q92623 222 aa9□□□□□ -0.97
SFXN1-202ENST00000421887 COG6Q9Y2V7 657 aa9□□□□□ -0.97
SFXN1-202ENST00000421887 KDM6BO15054 1643 aa9□□□□□ -0.97
SFXN1-202ENST00000421887 ARID1BQ8NFD5 2236 aaPredicted RBP8.99□□□□□ -0.97
SFXN1-202ENST00000421887 F8W735 103 aaPredicted RBP8.99□□□□□ -0.97
SFXN1-202ENST00000421887 SASH3O75995 380 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 TGFB1P01137 390 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 RARAP10276 462 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 GLB1P16278 677 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 EIF2AK2P19525 551 aaKnown RBP8.99□□□□□ -0.97
SFXN1-202ENST00000421887 GRNP28799 593 aaKnown RBP8.99□□□□□ -0.97
SFXN1-202ENST00000421887 MCM6Q14566 821 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 WWC1Q8IX03 1113 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 STAG2Q8N3U4 1231 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 MKRN1Q9UHC7 482 aaKnown RBP8.99□□□□□ -0.97
SFXN1-202ENST00000421887 BCS1LQ9Y276 419 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 ERCC6L2Q5T890 1561 aa8.99□□□□□ -0.97
SFXN1-202ENST00000421887 GPLD1P80108 840 aa8.98□□□□□ -0.97
SFXN1-202ENST00000421887 RTN1Q16799 776 aa8.98□□□□□ -0.97
SFXN1-202ENST00000421887 PLEKHM2Q8IWE5 1019 aa8.98□□□□□ -0.97
SFXN1-202ENST00000421887 TMEM130Q8N3G9 435 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms