RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 SCN7AQ01118 1682 aa12.4□□□□□ -0.42
HMGA1P6-201ENST00000418454 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
HMGA1P6-201ENST00000418454 SF3B2Q13435 895 aaKnown RBP12.39□□□□□ -0.43
HMGA1P6-201ENST00000418454 ATG9AQ7Z3C6 839 aa12.39□□□□□ -0.43
HMGA1P6-201ENST00000418454 C16orf71Q8IYS4 520 aaPredicted RBP12.39□□□□□ -0.43
HMGA1P6-201ENST00000418454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.39□□□□□ -0.43
HMGA1P6-201ENST00000418454 NLRP3Q96P20 1036 aa12.39□□□□□ -0.43
HMGA1P6-201ENST00000418454 CAMKK2Q96RR4 588 aa12.39□□□□□ -0.43
HMGA1P6-201ENST00000418454 ECHDC1Q9NTX5 307 aa12.39□□□□□ -0.43
HMGA1P6-201ENST00000418454 MROH5Q6ZUA9 1318 aa12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 GYS1P13807 737 aa12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 ITGA6P23229 1130 aa12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 CDC5LQ99459 802 aaKnown RBP12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 UPF2Q9HAU5 1272 aaKnown RBP12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 RIPOR2Q9Y4F9 1068 aa12.38□□□□□ -0.43
HMGA1P6-201ENST00000418454 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 CDC45O75419 566 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 BAG6P46379 1132 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 KCNQ4P56696 695 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 TNNI3KQ59H18 835 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 NBPF5PQ86XG9 351 aaPredicted RBP12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 ZNF512BQ96KM6 892 aaPredicted RBP12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 TFCP2L1Q9NZI6 479 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 PA2G4Q9UQ80 394 aaKnown RBP12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 CHMP3Q9Y3E7 222 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 FPGT-TNNI3KV9GXZ4 949 aa12.37□□□□□ -0.43
HMGA1P6-201ENST00000418454 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 IGSF3O75054 1194 aa12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 ATP5JP18859 108 aa12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 PI4K2BQ8TCG2 481 aa12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 JARID2Q92833 1246 aaPredicted RBP12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 EAF2Q96CJ1 260 aaPredicted RBP12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 GREM2Q9H772 168 aa12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 RBM19Q9Y4C8 960 aaKnown RBP12.36□□□□□ -0.43
HMGA1P6-201ENST00000418454 COL24A1Q17RW2 1714 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 KLRG2A4D1S0 409 aaPredicted RBP12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 APBB1O00213 710 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 HIP1O00291 1037 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 GSPT1P15170 499 aaKnown RBP12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 IGHMBP2P38935 993 aaKnown RBP12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 TFCP2Q12800 502 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 NFIXQ14938 502 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 AACSQ86V21 672 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 CNTROBQ8N137 903 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 IL1RAPL2Q9NP60 686 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 BSDC1Q9NW68 430 aaPredicted RBP12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 UBR3Q6ZT12 1888 aa12.35□□□□□ -0.43
HMGA1P6-201ENST00000418454 LAMB2P55268 1798 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 PDE8BO95263 885 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 SDSP20132 328 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 SLC15A2Q16348 729 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 ERFEQ4G0M1 354 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 RTL5Q5HYW3 569 aaPredicted RBP12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 TMC4Q7Z404 712 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 SKAP1Q86WV1 359 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 SLC16A10Q8TF71 515 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 EVI5LQ96CN4 794 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 STK32BQ9NY57 414 aa12.34□□□□□ -0.43
HMGA1P6-201ENST00000418454 RFX7Q2KHR2 1363 aa12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 HCLS1P14317 486 aaPredicted RBP12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 ST5P78524 1137 aa12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 SYNE4Q8N205 404 aa12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 CNBD1Q8NA66 436 aa12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 OTUD7AQ8TE49 926 aaPredicted RBP12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 SIL1Q9H173 461 aa12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 CNNM1Q9NRU3 951 aa12.33□□□□□ -0.44
HMGA1P6-201ENST00000418454 PHF14O94880 888 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 SERPINB2P05120 415 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 LRRFIP1Q32MZ4 808 aaKnown RBP12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 LRRC24Q50LG9 513 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 CCDC158Q5M9N0 1113 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 TMED8Q6PL24 325 aaPredicted RBP12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 AMIGO3Q86WK7 504 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 NUTM1Q86Y26 1132 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 ANKRD18AQ8IVF6 992 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 VGLL2Q8N8G2 317 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 KLHDC4Q8TBB5 520 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 LPIN2Q92539 896 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 ANKRD2Q9GZV1 360 aa12.32□□□□□ -0.44
HMGA1P6-201ENST00000418454 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 MYH3P11055 1940 aa12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 BBOX1O75936 387 aa12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 REC8O95072 547 aa12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 RPS8P62241 208 aaKnown RBP12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 PUM3Q15397 648 aaKnown RBP12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 ZNF827Q17R98 1081 aa12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 METTL24Q5JXM2 366 aa12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
HMGA1P6-201ENST00000418454 COL23A1Q86Y22 540 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms