RNA–Protein interactions for RNA: ENST00000417773.5

LINC00222-204, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best)

Gene LINC00222, Length 599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-204ENST00000417773 EXOC6Q8TAG9 804 aa17.77■□□□□ 0.44
LINC00222-204ENST00000417773 NLRP3Q96P20 1036 aa17.77■□□□□ 0.44
LINC00222-204ENST00000417773 BRCA1P38398 1863 aaKnown RBP17.77■□□□□ 0.43
LINC00222-204ENST00000417773 COL4A1P02462 1669 aa17.77■□□□□ 0.43
LINC00222-204ENST00000417773 SRGNP10124 158 aa17.76■□□□□ 0.43
LINC00222-204ENST00000417773 PDE6BP35913 854 aa17.76■□□□□ 0.43
LINC00222-204ENST00000417773 TGFB2P61812 414 aa17.76■□□□□ 0.43
LINC00222-204ENST00000417773 KCNA3P22001 575 aa17.74■□□□□ 0.43
LINC00222-204ENST00000417773 RFX5P48382 616 aaPredicted RBP17.74■□□□□ 0.43
LINC00222-204ENST00000417773 POLA2Q14181 598 aa17.74■□□□□ 0.43
LINC00222-204ENST00000417773 CCDC152Q4G0S7 254 aa17.74■□□□□ 0.43
LINC00222-204ENST00000417773 CEP85Q6P2H3 762 aa17.74■□□□□ 0.43
LINC00222-204ENST00000417773 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
LINC00222-204ENST00000417773 NPHP1O15259 732 aa17.73■□□□□ 0.43
LINC00222-204ENST00000417773 IRX6P78412 446 aaPredicted RBP17.73■□□□□ 0.43
LINC00222-204ENST00000417773 ATP8B2P98198 1209 aa17.73■□□□□ 0.43
LINC00222-204ENST00000417773 SIRT2Q8IXJ6 389 aa17.73■□□□□ 0.43
LINC00222-204ENST00000417773 GREM2Q9H772 168 aa17.73■□□□□ 0.43
LINC00222-204ENST00000417773 C1orf115Q9H7X2 142 aa17.73■□□□□ 0.43
LINC00222-204ENST00000417773 NPR1P16066 1061 aa17.72■□□□□ 0.43
LINC00222-204ENST00000417773 FAM161AQ3B820 660 aa17.72■□□□□ 0.43
LINC00222-204ENST00000417773 STYK1Q6J9G0 422 aa17.72■□□□□ 0.43
LINC00222-204ENST00000417773 RPAP2Q8IXW5 612 aaPredicted RBP17.72■□□□□ 0.43
LINC00222-204ENST00000417773 SSH3Q8TE77 659 aa17.72■□□□□ 0.43
LINC00222-204ENST00000417773 CRAMP1Q96RY5 1269 aa17.72■□□□□ 0.43
LINC00222-204ENST00000417773 PCDHB15Q9Y5E8 787 aa17.72■□□□□ 0.43
LINC00222-204ENST00000417773 PNMA6EA0A0J9YXQ4 647 aa17.71■□□□□ 0.43
LINC00222-204ENST00000417773 MASTLQ96GX5 879 aa17.71■□□□□ 0.43
LINC00222-204ENST00000417773 LRRC37AA6NMS7 1700 aa17.71■□□□□ 0.43
LINC00222-204ENST00000417773 TAF1P21675 1872 aa17.71■□□□□ 0.43
LINC00222-204ENST00000417773 SRCAPQ6ZRS2 3230 aa17.7■□□□□ 0.42
LINC00222-204ENST00000417773 H0YIN7 160 aa17.7■□□□□ 0.42
LINC00222-204ENST00000417773 DPEP1P16444 411 aa17.7■□□□□ 0.42
LINC00222-204ENST00000417773 ITGA6P23229 1130 aa17.7■□□□□ 0.42
LINC00222-204ENST00000417773 CHRNA5P30532 468 aa17.7■□□□□ 0.42
LINC00222-204ENST00000417773 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
LINC00222-204ENST00000417773 FHDC1Q9C0D6 1143 aaPredicted RBP17.7■□□□□ 0.42
LINC00222-204ENST00000417773 SEC31BQ9NQW1 1179 aa17.7■□□□□ 0.42
LINC00222-204ENST00000417773 PTPN12Q05209 780 aaKnown RBP17.69■□□□□ 0.42
LINC00222-204ENST00000417773 GRAPQ13588 217 aa17.69■□□□□ 0.42
LINC00222-204ENST00000417773 ERICH6BQ5W0A0 696 aa17.69■□□□□ 0.42
LINC00222-204ENST00000417773 GRAPLQ8TC17 118 aaPredicted RBP17.69■□□□□ 0.42
LINC00222-204ENST00000417773 COPRSQ9NQ92 184 aa17.69■□□□□ 0.42
LINC00222-204ENST00000417773 SNED1Q8TER0 1413 aa17.69■□□□□ 0.42
LINC00222-204ENST00000417773 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
LINC00222-204ENST00000417773 RPGRQ92834 1020 aaKnown RBP17.68■□□□□ 0.42
LINC00222-204ENST00000417773 CELF1Q92879 486 aaKnown RBP17.68■□□□□ 0.42
LINC00222-204ENST00000417773 RBM17Q96I25 401 aaKnown RBP17.68■□□□□ 0.42
LINC00222-204ENST00000417773 SYT17Q9BSW7 474 aa17.68■□□□□ 0.42
LINC00222-204ENST00000417773 SLX4Q8IY92 1834 aa17.68■□□□□ 0.42
LINC00222-204ENST00000417773 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
LINC00222-204ENST00000417773 ANKRD18BA2A2Z9 1011 aa17.67■□□□□ 0.42
LINC00222-204ENST00000417773 SRGAP3O43295 1099 aa17.67■□□□□ 0.42
LINC00222-204ENST00000417773 IFIT5Q13325 482 aaKnown RBP17.67■□□□□ 0.42
LINC00222-204ENST00000417773 DDX46Q7L014 1031 aaKnown RBP17.67■□□□□ 0.42
LINC00222-204ENST00000417773 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
LINC00222-204ENST00000417773 CDC5LQ99459 802 aaKnown RBP17.67■□□□□ 0.42
LINC00222-204ENST00000417773 FBXO3Q9UK99 471 aa17.67■□□□□ 0.42
LINC00222-204ENST00000417773 ALDH1B1P30837 517 aa17.66■□□□□ 0.42
LINC00222-204ENST00000417773 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
LINC00222-204ENST00000417773 CCDC57Q2TAC2 916 aa17.66■□□□□ 0.42
LINC00222-204ENST00000417773 CNKSR1Q969H4 720 aa17.66■□□□□ 0.42
LINC00222-204ENST00000417773 CCDC85AQ96PX6 553 aaPredicted RBP17.66■□□□□ 0.42
LINC00222-204ENST00000417773 NOP58Q9Y2X3 529 aaKnown RBP17.66■□□□□ 0.42
LINC00222-204ENST00000417773 LTBP1Q14766 1721 aa17.66■□□□□ 0.42
LINC00222-204ENST00000417773 A0A1B0GUL6 1792 aa17.66■□□□□ 0.42
LINC00222-204ENST00000417773 ARFGEF1Q9Y6D6 1849 aa17.65■□□□□ 0.42
LINC00222-204ENST00000417773 BBOX1O75936 387 aa17.65■□□□□ 0.42
LINC00222-204ENST00000417773 NEFLP07196 543 aa17.65■□□□□ 0.42
LINC00222-204ENST00000417773 RPS8P62241 208 aaKnown RBP17.65■□□□□ 0.42
LINC00222-204ENST00000417773 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
LINC00222-204ENST00000417773 BSDC1Q9NW68 430 aaPredicted RBP17.65■□□□□ 0.42
LINC00222-204ENST00000417773 SPEF2Q9C093 1822 aa17.65■□□□□ 0.42
LINC00222-204ENST00000417773 CIAO1O76071 339 aa17.64■□□□□ 0.41
LINC00222-204ENST00000417773 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.41
LINC00222-204ENST00000417773 CHMP3Q9Y3E7 222 aa17.64■□□□□ 0.41
LINC00222-204ENST00000417773 RIPOR2Q9Y4F9 1068 aa17.64■□□□□ 0.41
LINC00222-204ENST00000417773 CACNA1SQ13698 1873 aa17.64■□□□□ 0.41
LINC00222-204ENST00000417773 HMMRO75330 724 aa17.63■□□□□ 0.41
LINC00222-204ENST00000417773 PRPF40BQ6NWY9 871 aaKnown RBP17.63■□□□□ 0.41
LINC00222-204ENST00000417773 ATG9AQ7Z3C6 839 aa17.63■□□□□ 0.41
LINC00222-204ENST00000417773 ANKRD18AQ8IVF6 992 aa17.63■□□□□ 0.41
LINC00222-204ENST00000417773 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
LINC00222-204ENST00000417773 KLHDC4Q8TBB5 520 aa17.63■□□□□ 0.41
LINC00222-204ENST00000417773 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
LINC00222-204ENST00000417773 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
LINC00222-204ENST00000417773 PA2G4Q9UQ80 394 aaKnown RBP17.63■□□□□ 0.41
LINC00222-204ENST00000417773 EYA2O00167 538 aa17.62■□□□□ 0.41
LINC00222-204ENST00000417773 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
LINC00222-204ENST00000417773 ATP6V0A2Q9Y487 856 aa17.62■□□□□ 0.41
LINC00222-204ENST00000417773 PPEF1O14829 653 aaPredicted RBP17.61■□□□□ 0.41
LINC00222-204ENST00000417773 IGHMBP2P38935 993 aaKnown RBP17.61■□□□□ 0.41
LINC00222-204ENST00000417773 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
LINC00222-204ENST00000417773 VGLL2Q8N8G2 317 aa17.61■□□□□ 0.41
LINC00222-204ENST00000417773 PUS3Q9BZE2 481 aaKnown RBP17.61■□□□□ 0.41
LINC00222-204ENST00000417773 DCTPP1Q9H773 170 aa17.61■□□□□ 0.41
LINC00222-204ENST00000417773 DUOX1Q9NRD9 1551 aa17.61■□□□□ 0.41
LINC00222-204ENST00000417773 LRRC24Q50LG9 513 aa17.6■□□□□ 0.41
LINC00222-204ENST00000417773 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
LINC00222-204ENST00000417773 MINPP1Q9UNW1 487 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms