RNA–Protein interactions for RNA: ENST00000417728.5

PTPA-212, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-212ENST00000417728 LMBR1LQ6UX01 489 aa12.46□□□□□ -0.41
PTPA-212ENST00000417728 TTLL11Q8NHH1 800 aa12.46□□□□□ -0.41
PTPA-212ENST00000417728 SPON1Q9HCB6 807 aa12.46□□□□□ -0.41
PTPA-212ENST00000417728 SRGAP3O43295 1099 aa12.45□□□□□ -0.42
PTPA-212ENST00000417728 HMMRO75330 724 aa12.45□□□□□ -0.42
PTPA-212ENST00000417728 RFX5P48382 616 aaPredicted RBP12.45□□□□□ -0.42
PTPA-212ENST00000417728 SF3B3Q15393 1217 aaKnown RBP12.45□□□□□ -0.42
PTPA-212ENST00000417728 C3orf67Q6ZVT6 689 aa12.45□□□□□ -0.42
PTPA-212ENST00000417728 PARP3Q9Y6F1 533 aa12.45□□□□□ -0.42
PTPA-212ENST00000417728 KIF13BQ9NQT8 1826 aa12.45□□□□□ -0.42
PTPA-212ENST00000417728 COL11A2P13942 1736 aaPredicted RBP12.45□□□□□ -0.42
PTPA-212ENST00000417728 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
PTPA-212ENST00000417728 POLD1P28340 1107 aa12.44□□□□□ -0.42
PTPA-212ENST00000417728 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
PTPA-212ENST00000417728 ST5P78524 1137 aa12.44□□□□□ -0.42
PTPA-212ENST00000417728 FAM161AQ3B820 660 aa12.44□□□□□ -0.42
PTPA-212ENST00000417728 SMC5Q8IY18 1101 aa12.44□□□□□ -0.42
PTPA-212ENST00000417728 RWDD1Q9H446 243 aaPredicted RBP12.44□□□□□ -0.42
PTPA-212ENST00000417728 COL4A1P02462 1669 aa12.44□□□□□ -0.42
PTPA-212ENST00000417728 KLRG2A4D1S0 409 aaPredicted RBP12.43□□□□□ -0.42
PTPA-212ENST00000417728 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
PTPA-212ENST00000417728 CENPQQ7L2Z9 268 aaPredicted RBP12.43□□□□□ -0.42
PTPA-212ENST00000417728 CCDC24Q8N4L8 307 aa12.43□□□□□ -0.42
PTPA-212ENST00000417728 GREM2Q9H772 168 aa12.43□□□□□ -0.42
PTPA-212ENST00000417728 DCTPP1Q9H773 170 aa12.43□□□□□ -0.42
PTPA-212ENST00000417728 COPRSQ9NQ92 184 aa12.43□□□□□ -0.42
PTPA-212ENST00000417728 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
PTPA-212ENST00000417728 PTPN12Q05209 780 aaKnown RBP12.42□□□□□ -0.42
PTPA-212ENST00000417728 CCDC152Q4G0S7 254 aa12.42□□□□□ -0.42
PTPA-212ENST00000417728 NLRP3Q96P20 1036 aa12.42□□□□□ -0.42
PTPA-212ENST00000417728 NOP58Q9Y2X3 529 aaKnown RBP12.42□□□□□ -0.42
PTPA-212ENST00000417728 DLEC1Q9Y238 1755 aa12.42□□□□□ -0.42
PTPA-212ENST00000417728 KIAA1551Q9HCM1 1747 aa12.42□□□□□ -0.42
PTPA-212ENST00000417728 SPEF2Q9C093 1822 aa12.41□□□□□ -0.42
PTPA-212ENST00000417728 NPHP1O15259 732 aa12.41□□□□□ -0.42
PTPA-212ENST00000417728 TAF1P21675 1872 aa12.41□□□□□ -0.42
PTPA-212ENST00000417728 GCC1Q96CN9 775 aa12.41□□□□□ -0.42
PTPA-212ENST00000417728 BRIP1Q9BX63 1249 aa12.41□□□□□ -0.42
PTPA-212ENST00000417728 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
PTPA-212ENST00000417728 ITGA6P23229 1130 aa12.4□□□□□ -0.42
PTPA-212ENST00000417728 IFIT5Q13325 482 aaKnown RBP12.4□□□□□ -0.42
PTPA-212ENST00000417728 CCDC57Q2TAC2 916 aa12.4□□□□□ -0.42
PTPA-212ENST00000417728 KLHDC4Q8TBB5 520 aa12.4□□□□□ -0.42
PTPA-212ENST00000417728 CCDC85AQ96PX6 553 aaPredicted RBP12.4□□□□□ -0.42
PTPA-212ENST00000417728 PA2G4Q9UQ80 394 aaKnown RBP12.4□□□□□ -0.42
PTPA-212ENST00000417728 CHMP3Q9Y3E7 222 aa12.4□□□□□ -0.42
PTPA-212ENST00000417728 ANKRD18BA2A2Z9 1011 aa12.39□□□□□ -0.43
PTPA-212ENST00000417728 SURF6O75683 361 aaKnown RBP12.39□□□□□ -0.43
PTPA-212ENST00000417728 HOXA10P31260 410 aaPredicted RBP12.39□□□□□ -0.43
PTPA-212ENST00000417728 SEC31BQ9NQW1 1179 aa12.39□□□□□ -0.43
PTPA-212ENST00000417728 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
PTPA-212ENST00000417728 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
PTPA-212ENST00000417728 LRRC37AA6NMS7 1700 aa12.39□□□□□ -0.43
PTPA-212ENST00000417728 CIAO1O76071 339 aa12.38□□□□□ -0.43
PTPA-212ENST00000417728 PDE6BP35913 854 aa12.38□□□□□ -0.43
PTPA-212ENST00000417728 ATG9AQ7Z3C6 839 aa12.38□□□□□ -0.43
PTPA-212ENST00000417728 ZNF594Q96JF6 807 aaPredicted RBP12.38□□□□□ -0.43
PTPA-212ENST00000417728 EYA2O00167 538 aa12.37□□□□□ -0.43
PTPA-212ENST00000417728 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
PTPA-212ENST00000417728 SRGNP10124 158 aa12.37□□□□□ -0.43
PTPA-212ENST00000417728 NUCB1Q02818 461 aa12.37□□□□□ -0.43
PTPA-212ENST00000417728 HSP90AB4PQ58FF6 505 aa12.37□□□□□ -0.43
PTPA-212ENST00000417728 CDC5LQ99459 802 aaKnown RBP12.37□□□□□ -0.43
PTPA-212ENST00000417728 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
PTPA-212ENST00000417728 CD2APQ9Y5K6 639 aa12.37□□□□□ -0.43
PTPA-212ENST00000417728 BRCA1P38398 1863 aaKnown RBP12.36□□□□□ -0.43
PTPA-212ENST00000417728 SASH1O94885 1247 aa12.36□□□□□ -0.43
PTPA-212ENST00000417728 TAF7LQ5H9L4 462 aa12.36□□□□□ -0.43
PTPA-212ENST00000417728 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
PTPA-212ENST00000417728 ERC1Q8IUD2 1116 aa12.36□□□□□ -0.43
PTPA-212ENST00000417728 RPGRQ92834 1020 aaKnown RBP12.36□□□□□ -0.43
PTPA-212ENST00000417728 CELF1Q92879 486 aaKnown RBP12.36□□□□□ -0.43
PTPA-212ENST00000417728 CRAMP1Q96RY5 1269 aa12.36□□□□□ -0.43
PTPA-212ENST00000417728 PUS3Q9BZE2 481 aaKnown RBP12.36□□□□□ -0.43
PTPA-212ENST00000417728 SIL1Q9H173 461 aa12.36□□□□□ -0.43
PTPA-212ENST00000417728 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
PTPA-212ENST00000417728 RIPOR2Q9Y4F9 1068 aa12.36□□□□□ -0.43
PTPA-212ENST00000417728 LTBP1Q14766 1721 aa12.35□□□□□ -0.43
PTPA-212ENST00000417728 NPR1P16066 1061 aa12.35□□□□□ -0.43
PTPA-212ENST00000417728 IL15P40933 162 aaPredicted RBP12.35□□□□□ -0.43
PTPA-212ENST00000417728 G3BP1Q13283 466 aaKnown RBP eCLIP12.35□□□□□ -0.432e-6■■■■□ 24.8
PTPA-212ENST00000417728 GRAPQ13588 217 aa12.35□□□□□ -0.43
PTPA-212ENST00000417728 LRRC24Q50LG9 513 aa12.35□□□□□ -0.43
PTPA-212ENST00000417728 GRAPLQ8TC17 118 aaPredicted RBP12.35□□□□□ -0.43
PTPA-212ENST00000417728 RHPN1Q8TCX5 695 aa12.35□□□□□ -0.43
PTPA-212ENST00000417728 KIF1BPQ96EK5 621 aa12.35□□□□□ -0.43
PTPA-212ENST00000417728 CACNA1SQ13698 1873 aa12.35□□□□□ -0.43
PTPA-212ENST00000417728 ARAP2Q8WZ64 1704 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 IGHMBP2P38935 993 aaKnown RBP12.34□□□□□ -0.43
PTPA-212ENST00000417728 TGFB2P61812 414 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 RPS8P62241 208 aaKnown RBP12.34□□□□□ -0.43
PTPA-212ENST00000417728 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
PTPA-212ENST00000417728 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 LDHAL6AQ6ZMR3 332 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 CHD1LQ86WJ1 897 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 C2CD5Q86YS7 1000 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 ANKRD18AQ8IVF6 992 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 VGLL2Q8N8G2 317 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
PTPA-212ENST00000417728 RBM17Q96I25 401 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms