RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 IL16Q14005 1332 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 ERCC6Q03468 1493 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 RCCD1A6NED2 376 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 EIF3CLB5ME19 914 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 U2AF1L5P0DN76 240 aaPredicted RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 MCCP23508 829 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 ATP6V1AP38606 617 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 U2AF1Q01081 240 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 CCDC93Q567U6 631 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 GIGYF2Q6Y7W6 1299 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 LRRN4CLQ8ND94 238 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 TDRD7Q8NHU6 1098 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 CEP89Q96ST8 783 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 EIF3CQ99613 913 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 DCTPP1Q9H773 170 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 TRMT1Q9NXH9 659 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 ORC3Q9UBD5 711 aaPredicted RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 SASH3O75995 380 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 F13A1P00488 732 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 MAP2K2P36507 400 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 MTHFSP49914 203 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 ANAPC15P60006 121 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 FAM98CQ17RN3 349 aaKnown RBP7.5□□□□□ -1.21
CCNT1-202ENST00000417344 ANO6Q4KMQ2 910 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 ADGRD1Q6QNK2 874 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 MMS22LQ6ZRQ5 1243 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 ANKRD20A12PQ8NF67 263 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 UBXN4Q92575 508 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 TMEM134Q9H6X4 195 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 GPBP1L1Q9HC44 474 aaPredicted RBP7.5□□□□□ -1.21
CCNT1-202ENST00000417344 ADAM21Q9UKJ8 722 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 IQGAP2Q13576 1575 aa7.5□□□□□ -1.21
CCNT1-202ENST00000417344 PPRC1Q5VV67 1664 aaKnown RBP7.5□□□□□ -1.21
CCNT1-202ENST00000417344 BHMG1C9JSJ3 638 aaPredicted RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 STX6O43752 255 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 SEC31AO94979 1220 aaKnown RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CEP152O94986 1710 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 TBC1D8O95759 1140 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CPP00450 1065 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 SNW1Q13573 536 aaKnown RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 NBPF20Q3BBV1 942 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 DNAJC21Q5F1R6 531 aaKnown RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 OTUD7AQ8TE49 926 aaPredicted RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 ARHGAP45Q92619 1136 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 NUP62CLQ9H1M0 184 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 TDRD9Q8NDG6 1382 aaKnown RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CD109Q6YHK3 1445 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CCDC196A0A1B0GTZ2 297 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CCDC189A1A4V9 331 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CCDC69A6NI79 296 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 RPS6KA5O75582 802 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 TPM1P09493 284 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 ZNF853P0CG23 659 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CORO7P57737 925 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CCZ1BP86790 482 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 CCZ1P86791 482 aaPredicted RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 ARID5BQ14865 1188 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 SULF1Q8IWU6 871 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 ZNF428Q96B54 188 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 ZSCAN16Q9H4T2 348 aaPredicted RBP7.49□□□□□ -1.21
CCNT1-202ENST00000417344 PALD1Q9ULE6 856 aa7.49□□□□□ -1.21
CCNT1-202ENST00000417344 MADDQ8WXG6 1647 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 TTC37Q6PGP7 1564 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 CFAP65Q6ZU64 1925 aaKnown RBP7.48□□□□□ -1.21
CCNT1-202ENST00000417344 PTCH1Q13635 1447 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 GOLIM4O00461 696 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 TUBB4AP04350 444 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 SYT1P21579 422 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 TMPOP42166 694 aaKnown RBP7.48□□□□□ -1.21
CCNT1-202ENST00000417344 CAMK4Q16566 473 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 CCDC158Q5M9N0 1113 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 CC2D1AQ6P1N0 951 aaPredicted RBP7.48□□□□□ -1.21
CCNT1-202ENST00000417344 TMED8Q6PL24 325 aaPredicted RBP7.48□□□□□ -1.21
CCNT1-202ENST00000417344 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 RAI14Q9P0K7 980 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 ERVK-7P63135 1459 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 ABCC4O15439 1325 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 NSD3Q9BZ95 1437 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 PDS5BQ9NTI5 1447 aa7.48□□□□□ -1.21
CCNT1-202ENST00000417344 ZNF165P49910 485 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 DNM1Q05193 864 aaKnown RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 TRDNQ13061 729 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 ZRSR1Q15695 479 aaKnown RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 SARM1Q6SZW1 724 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 RPAINQ86UA6 219 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 EFCAB13Q8IY85 973 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 IL17RAQ96F46 866 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 TNMDQ9H2S6 317 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 FAM217BQ9NTX9 383 aaPredicted RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 CDC42BPAQ5VT25 1732 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 EFCAB8A8MWE9 144 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 C3orf80F5H4A9 247 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 HRO43593 1189 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 HDGFP51858 240 aaKnown RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 CKAP2LQ8IYA6 745 aa7.47□□□□□ -1.21
CCNT1-202ENST00000417344 MRPL50Q8N5N7 158 aaKnown RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 PLEKHF1Q96S99 279 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms