RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CHAC2Q8WUX2 184 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 FMNL2Q96PY5 1086 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 EYA1Q99502 592 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 NBPF3Q9H094 633 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CCDC113Q9H0I3 377 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 ENAMQ9NRM1 1142 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CCDC87Q9NVE4 849 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CWC25Q9NXE8 425 aaPredicted RBP3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM13BQ9NYF5 915 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CNTN3Q9P232 1028 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 ABCF2Q9UG63 623 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 SPG7Q9UQ90 795 aa3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 CTDP1Q9Y5B0 961 aaPredicted RBP3.86□□□□□ -1.79
CTDSPL-203ENST00000416688 TMEM238LA0A1B0GVL6 79 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 E2F8A0AVK6 867 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 DYTNA2CJ06 578 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 CCDC85CA6NKD9 419 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 C6orf229H3BNL8 230 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 RASGRP1O95267 797 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 EIF4BP23588 611 aaKnown RBP3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 DDIT3P35638 169 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 SLC4A3P48751 1232 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 TERF1P54274 439 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 KCNH2Q12809 1159 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 CBLBQ13191 982 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 PDE1CQ14123 709 aaPredicted RBP3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 ARSIQ5FYB1 569 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 CCDC102BQ68D86 513 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 MSL1Q68DK7 614 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 DDX46Q7L014 1031 aaKnown RBP3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 ZNF354CQ86Y25 554 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 RAVER1Q8IY67 606 aaKnown RBP3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 ENAHQ8N8S7 591 aaPredicted RBP3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 TTC13Q8NBP0 860 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 PPHLN1Q8NEY8 458 aaKnown RBP3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 SELENOOQ9BVL4 669 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 ATG3Q9NT62 314 aa3.85□□□□□ -1.79
CTDSPL-203ENST00000416688 PNMA6FA0A0J9YX94 578 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 PRRT4C9JH25 899 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 CFAP99D6REC4 459 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 RIMBP2O15034 1052 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 KLF4O43474 513 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 SCGB1D2O95969 90 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 NBPF7P0C2Y1 421 aaPredicted RBP3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 CPEP16870 476 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 DNAJB2P25686 324 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 MZF1P28698 734 aaPredicted RBP3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 WEE1P30291 646 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 SOX5P35711 763 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 CDKN1CP49918 316 aaPredicted RBP3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 PICALMQ13492 652 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 NBPF20Q3BBV1 942 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 CCDC93Q567U6 631 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 VARS2Q5ST30 1063 aaKnown RBP3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 HYIQ5T013 277 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 WWC2Q6AWC2 1192 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 ANKRD23Q86SG2 305 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 CEP120Q8N960 986 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 TPCN2Q8NHX9 752 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 KHSRPQ92945 711 aaKnown RBP eCLIP3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 ERP27Q96DN0 273 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 TRIM44Q96DX7 344 aaPredicted RBP3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 SCLT1Q96NL6 688 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 FAM129BQ96TA1 746 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 DNAJC7Q99615 494 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 CSRNP2Q9H175 543 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 MUC3BQ9H195 1237 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 RETREG1Q9H6L5 497 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 CHST12Q9NRB3 414 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 RNF19AQ9NV58 838 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 ISY1Q9ULR0 285 aaKnown RBP3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 PCDHGC3Q9UN70 934 aa3.84□□□□□ -1.79
CTDSPL-203ENST00000416688 SHTN1A0MZ66 631 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 FAM170AA1A519 330 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 FAM221BA6H8Z2 402 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 HMMRO75330 724 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 TCEA3O75764 348 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 SLC34A2O95436 690 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 CTSHP09668 335 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 MPSTP25325 297 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 ATICP31939 592 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 PDE6BP35913 854 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 ETFBP38117 255 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 GEMIN4P57678 1058 aaKnown RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 GTF2IP78347 998 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 PURAQ00577 322 aaKnown RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 COL9A2Q14055 689 aaPredicted RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 SIM2Q14190 667 aaPredicted RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 NAA30Q147X3 362 aaPredicted RBP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 SLC4A8Q2Y0W8 1093 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 GFOD2Q3B7J2 385 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 ALDH1L2Q3SY69 923 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 TNNI3KQ59H18 835 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 ANO1Q5XXA6 986 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 C14orf80Q86SX3 495 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 DDX42Q86XP3 938 aaKnown RBP eCLIP3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 JAMLQ86YT9 394 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 SPICE1Q8N0Z3 855 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 LILRB2Q8N423 598 aa3.83□□□□□ -1.8
CTDSPL-203ENST00000416688 TTC30BQ8N4P2 665 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms