RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 RGPD5Q99666 1765 aa17.52■□□□□ 0.4
LINC00475-202ENST00000416438 KRT85P78386 507 aa17.52■□□□□ 0.39
LINC00475-202ENST00000416438 UBE3BQ7Z3V4 1068 aa17.52■□□□□ 0.39
LINC00475-202ENST00000416438 DNAJC2Q99543 621 aaKnown RBP17.52■□□□□ 0.39
LINC00475-202ENST00000416438 PDCL3Q9H2J4 239 aa17.52■□□□□ 0.39
LINC00475-202ENST00000416438 NPHP3Q7Z494 1330 aa17.52■□□□□ 0.39
LINC00475-202ENST00000416438 PTPN12Q05209 780 aaKnown RBP17.51■□□□□ 0.39
LINC00475-202ENST00000416438 C1orf167Q5SNV9 1468 aa17.51■□□□□ 0.39
LINC00475-202ENST00000416438 TRPM3Q9HCF6 1732 aaPredicted RBP17.51■□□□□ 0.39
LINC00475-202ENST00000416438 OVOS2A0A0G2JMS6 1433 aa17.51■□□□□ 0.39
LINC00475-202ENST00000416438 JAK2O60674 1132 aa17.51■□□□□ 0.39
LINC00475-202ENST00000416438 PHKG2P15735 406 aa17.51■□□□□ 0.39
LINC00475-202ENST00000416438 TNNI3KQ59H18 835 aa17.51■□□□□ 0.39
LINC00475-202ENST00000416438 FPGT-TNNI3KV9GXZ4 949 aa17.51■□□□□ 0.39
LINC00475-202ENST00000416438 KDM6AO15550 1401 aaPredicted RBP17.5■□□□□ 0.39
LINC00475-202ENST00000416438 RFX5P48382 616 aaPredicted RBP17.5■□□□□ 0.39
LINC00475-202ENST00000416438 NOLC1Q14978 699 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00475-202ENST00000416438 SLFNL1Q499Z3 407 aa17.5■□□□□ 0.39
LINC00475-202ENST00000416438 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
LINC00475-202ENST00000416438 SPC24Q8NBT2 197 aa17.5■□□□□ 0.39
LINC00475-202ENST00000416438 DBNDD2Q9BQY9 259 aa17.5■□□□□ 0.39
LINC00475-202ENST00000416438 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
LINC00475-202ENST00000416438 LRRC2Q9BYS8 371 aa17.5■□□□□ 0.39
LINC00475-202ENST00000416438 GLIPR1L2Q4G1C9 344 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 PIBF1Q8WXW3 757 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 COPRSQ9NQ92 184 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 ANKRD1Q15327 319 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 CABLES1Q8TDN4 633 aa17.49■□□□□ 0.39
LINC00475-202ENST00000416438 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
LINC00475-202ENST00000416438 ATP5JP18859 108 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 DDX46Q7L014 1031 aaKnown RBP17.48■□□□□ 0.39
LINC00475-202ENST00000416438 ARID3AQ99856 593 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 DACT1Q9NYF0 836 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 A0A087WZG4 1122 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 CCDC192P0DO97 292 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 CSB-PGBD3P0DP91 1061 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 PDCP20941 246 aa17.48■□□□□ 0.39
LINC00475-202ENST00000416438 CHRNA2Q15822 529 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 TSC1Q92574 1164 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 SPATA32Q96LK8 384 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 NUP62CLQ9H1M0 184 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
LINC00475-202ENST00000416438 Q6ZUG5 572 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 LUZP1Q86V48 1076 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 TTC5Q8N0Z6 440 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 CAMTA1Q9Y6Y1 1673 aa17.47■□□□□ 0.39
LINC00475-202ENST00000416438 CYP21A2P08686 494 aa17.46■□□□□ 0.39
LINC00475-202ENST00000416438 MAP3K11Q16584 847 aa17.46■□□□□ 0.39
LINC00475-202ENST00000416438 TSGA10IPQ3SY00 556 aa17.46■□□□□ 0.39
LINC00475-202ENST00000416438 USPL1Q5W0Q7 1092 aa17.46■□□□□ 0.39
LINC00475-202ENST00000416438 HMG20BQ9P0W2 317 aa17.46■□□□□ 0.39
LINC00475-202ENST00000416438 MRVI1Q9Y6F6 885 aa17.46■□□□□ 0.39
LINC00475-202ENST00000416438 GOLGA6L4A6NEF3 574 aa17.46■□□□□ 0.38
LINC00475-202ENST00000416438 CYP27B1O15528 508 aa17.46■□□□□ 0.38
LINC00475-202ENST00000416438 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.38
LINC00475-202ENST00000416438 FOSBP53539 338 aa17.46■□□□□ 0.38
LINC00475-202ENST00000416438 IFNL2Q8IZJ0 200 aa17.46■□□□□ 0.38
LINC00475-202ENST00000416438 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
LINC00475-202ENST00000416438 ZNF609O15014 1411 aa17.45■□□□□ 0.38
LINC00475-202ENST00000416438 PPFIA3O75145 1194 aa17.45■□□□□ 0.38
LINC00475-202ENST00000416438 TYRO3Q06418 890 aa17.45■□□□□ 0.38
LINC00475-202ENST00000416438 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
LINC00475-202ENST00000416438 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
LINC00475-202ENST00000416438 KCNF1Q9H3M0 494 aa17.45■□□□□ 0.38
LINC00475-202ENST00000416438 LMBR1LQ6UX01 489 aa17.45■□□□□ 0.38
LINC00475-202ENST00000416438 BRF1Q92994 677 aa17.45■□□□□ 0.38
LINC00475-202ENST00000416438 PYCARDQ9ULZ3 195 aa17.45■□□□□ 0.38
LINC00475-202ENST00000416438 JCADQ9P266 1359 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 GTF3C6Q969F1 213 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 PGBD1Q96JS3 809 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 TNMDQ9H2S6 317 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 MEGF6O75095 1541 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 ELP1O95163 1332 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 DYNC1I1O14576 645 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 ATF3P18847 181 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 CEBPZQ03701 1054 aaKnown RBP17.44■□□□□ 0.38
LINC00475-202ENST00000416438 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
LINC00475-202ENST00000416438 NEUROD6Q96NK8 337 aa17.44■□□□□ 0.38
LINC00475-202ENST00000416438 SCAND2PQ9GZW5 306 aaPredicted RBP17.44■□□□□ 0.38
LINC00475-202ENST00000416438 C5P01031 1676 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 NR1I2O75469 434 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 MCMDC2Q4G0Z9 681 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 STOX1Q6ZVD7 989 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 FAM200AQ8TCP9 573 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 FAM177BA6PVY3 158 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 TIMM10P62072 90 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 ANO6Q4KMQ2 910 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 HAUS7Q99871 368 aa17.43■□□□□ 0.38
LINC00475-202ENST00000416438 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
LINC00475-202ENST00000416438 SCRN1Q12765 414 aa17.42■□□□□ 0.38
LINC00475-202ENST00000416438 KRT32Q14532 448 aa17.42■□□□□ 0.38
LINC00475-202ENST00000416438 BICD2Q8TD16 824 aa17.42■□□□□ 0.38
LINC00475-202ENST00000416438 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms