RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 NBPF1Q3BBV0 1214 aa8.09□□□□□ -1.11
XIST-201ENST00000416330 CNPY4Q8N129 248 aa8.09□□□□□ -1.11
XIST-201ENST00000416330 NIFKQ9BYG3 293 aaKnown RBP8.09□□□□□ -1.11
XIST-201ENST00000416330 DCDC2BA2VCK2 349 aa8.08□□□□□ -1.12
XIST-201ENST00000416330 ATP2B1P20020 1258 aa8.08□□□□□ -1.12
XIST-201ENST00000416330 ATP4AP20648 1035 aa8.08□□□□□ -1.12
XIST-201ENST00000416330 GDF10P55107 478 aa8.08□□□□□ -1.12
XIST-201ENST00000416330 FAM182BQ5T319 152 aa8.08□□□□□ -1.12
XIST-201ENST00000416330 CHIC2Q9UKJ5 165 aa8.08□□□□□ -1.12
XIST-201ENST00000416330 TATP17735 454 aaPredicted RBP8.07□□□□□ -1.12
XIST-201ENST00000416330 LONRF3Q496Y0 759 aa8.07□□□□□ -1.12
XIST-201ENST00000416330 PMFBP1Q8TBY8 1022 aa8.07□□□□□ -1.12
XIST-201ENST00000416330 BRINP2Q9C0B6 783 aa8.07□□□□□ -1.12
XIST-201ENST00000416330 NOVA2Q9UNW9 492 aaKnown RBP8.07□□□□□ -1.12
XIST-201ENST00000416330 SH3BP5O60239 455 aa8.06□□□□□ -1.12
XIST-201ENST00000416330 INHAP05111 366 aa8.06□□□□□ -1.12
XIST-201ENST00000416330 MAPTP10636 758 aaKnown RBP8.06□□□□□ -1.12
XIST-201ENST00000416330 CD33P20138 364 aa8.06□□□□□ -1.12
XIST-201ENST00000416330 KANK4Q5T7N3 995 aaPredicted RBP8.06□□□□□ -1.12
XIST-201ENST00000416330 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
XIST-201ENST00000416330 ZSWIM4Q9H7M6 989 aa8.06□□□□□ -1.12
XIST-201ENST00000416330 DNAAF2Q9NVR5 837 aaKnown RBP8.06□□□□□ -1.12
XIST-201ENST00000416330 A0A1W2PNR3 127 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 PAX3P23760 479 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 PCBP4P57723 403 aaKnown RBP8.05□□□□□ -1.12
XIST-201ENST00000416330 TNP2Q05952 138 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 PLEKHG6Q3KR16 790 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 JAZF1Q86VZ6 243 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 CCDC146Q8IYE0 955 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 PLPP7Q8NBV4 271 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 ZCRB1Q8TBF4 217 aaKnown RBP8.05□□□□□ -1.12
XIST-201ENST00000416330 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 COL4A3BPQ9Y5P4 624 aa8.05□□□□□ -1.12
XIST-201ENST00000416330 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.04□□□□□ -1.12
XIST-201ENST00000416330 ITGB7P26010 798 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 FOXD4Q12950 439 aaPredicted RBP8.04□□□□□ -1.12
XIST-201ENST00000416330 MRPL58Q14197 206 aaKnown RBP8.04□□□□□ -1.12
XIST-201ENST00000416330 ZFYVE27Q5T4F4 411 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 FCHSD1Q86WN1 690 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 NT5DC4Q86YG4 428 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 SLC43A3Q8NBI5 491 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 ZFP64Q9NPA5 681 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 SERTAD1Q9UHV2 236 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 DMGDHQ9UI17 866 aaKnown RBP8.04□□□□□ -1.12
XIST-201ENST00000416330 PNMA2Q9UL42 364 aa8.04□□□□□ -1.12
XIST-201ENST00000416330 ATP9BO43861 1147 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 SCNN1AP37088 669 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 LDLRAD1Q5T700 205 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 ZNF468Q5VIY5 522 aaPredicted RBP8.03□□□□□ -1.12
XIST-201ENST00000416330 BICDL1Q6ZP65 573 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 FAM43BQ6ZT52 329 aaPredicted RBP8.03□□□□□ -1.12
XIST-201ENST00000416330 ARMC5Q96C12 935 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 TRIM11Q96F44 468 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 NACC1Q96RE7 527 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 CAPN10Q9HC96 672 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 MARK1Q9P0L2 795 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 HCN2Q9UL51 889 aa8.03□□□□□ -1.12
XIST-201ENST00000416330 G3BP2Q9UN86 482 aaKnown RBP8.03□□□□□ -1.12
XIST-201ENST00000416330 SOX11P35716 441 aa8.02□□□□□ -1.13
XIST-201ENST00000416330 SMTNP53814 917 aa8.02□□□□□ -1.13
XIST-201ENST00000416330 MAP7D1Q3KQU3 841 aa8.02□□□□□ -1.13
XIST-201ENST00000416330 RNF187Q5TA31 235 aaPredicted RBP8.02□□□□□ -1.13
XIST-201ENST00000416330 ZNF746Q6NUN9 644 aaPredicted RBP8.02□□□□□ -1.13
XIST-201ENST00000416330 METTL16Q86W50 562 aaKnown RBP8.02□□□□□ -1.13
XIST-201ENST00000416330 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
XIST-201ENST00000416330 IRF2BPLQ9H1B7 796 aa8.02□□□□□ -1.13
XIST-201ENST00000416330 USP3Q9Y6I4 520 aa8.02□□□□□ -1.13
XIST-201ENST00000416330 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
XIST-201ENST00000416330 KRTAP9-6A0A140TA67 174 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 ELOA3DA6NLF2 546 aaPredicted RBP8.01□□□□□ -1.13
XIST-201ENST00000416330 TMEM229AB2RXF0 380 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 PIK3CDO00329 1044 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 MCCP23508 829 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 TRIM28Q13263 835 aaKnown RBP8.01□□□□□ -1.13
XIST-201ENST00000416330 BMS1Q14692 1282 aaKnown RBP8.01□□□□□ -1.13
XIST-201ENST00000416330 RSPO4Q2I0M5 234 aaPredicted RBP8.01□□□□□ -1.13
XIST-201ENST00000416330 ELOA3BQ3SY89 546 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 ELOA3Q8NG57 546 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 MAF1Q9H063 256 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 PCDH12Q9NPG4 1184 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 NLRP2Q9NX02 1062 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 KLF15Q9UIH9 416 aa8.01□□□□□ -1.13
XIST-201ENST00000416330 FAM157BP0CG42 384 aa8□□□□□ -1.13
XIST-201ENST00000416330 MAPK1P28482 360 aa8□□□□□ -1.13
XIST-201ENST00000416330 SEMA3FQ13275 785 aa8□□□□□ -1.13
XIST-201ENST00000416330 OS9Q13438 667 aaPredicted RBP8□□□□□ -1.13
XIST-201ENST00000416330 LAMC2Q13753 1193 aa8□□□□□ -1.13
XIST-201ENST00000416330 C4orf46Q504U0 113 aa8□□□□□ -1.13
XIST-201ENST00000416330 ARTNQ5T4W7 220 aa8□□□□□ -1.13
XIST-201ENST00000416330 TSHZ1Q6ZSZ6 1077 aa8□□□□□ -1.13
XIST-201ENST00000416330 RPUSD2Q8IZ73 545 aaKnown RBP8□□□□□ -1.13
XIST-201ENST00000416330 CCSER2Q9H7U1 834 aa8□□□□□ -1.13
XIST-201ENST00000416330 NEUROD4Q9HD90 331 aa8□□□□□ -1.13
XIST-201ENST00000416330 ZDHHC3Q9NYG2 299 aa8□□□□□ -1.13
XIST-201ENST00000416330 LZTS3O60299 673 aaPredicted RBP7.99□□□□□ -1.13
XIST-201ENST00000416330 RHBDL3P58872 404 aa7.99□□□□□ -1.13
XIST-201ENST00000416330 CCAR1Q8IX12 1150 aaKnown RBP7.99□□□□□ -1.13
XIST-201ENST00000416330 ASB16Q96NS5 453 aa7.99□□□□□ -1.13
XIST-201ENST00000416330 TPSG1Q9NRR2 321 aa7.99□□□□□ -1.13
XIST-201ENST00000416330 CABP1Q9NZU7 370 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms