RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ANKRD36CQ5JPF3 1778 aa17.38■□□□□ 0.37
CTHRC1-202ENST00000415886 RAD17O75943 681 aa17.37■□□□□ 0.37
CTHRC1-202ENST00000415886 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
CTHRC1-202ENST00000415886 SP8Q8IXZ3 490 aa17.37■□□□□ 0.37
CTHRC1-202ENST00000415886 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
CTHRC1-202ENST00000415886 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
CTHRC1-202ENST00000415886 TSPYL4Q9UJ04 414 aa17.37■□□□□ 0.37
CTHRC1-202ENST00000415886 SHTN1A0MZ66 631 aa17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 HCLS1P14317 486 aaPredicted RBP17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 MPNDQ8N594 471 aa17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 PGAP2Q9UHJ9 254 aa17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 CDHR2Q9BYE9 1310 aa17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 DUOX1Q9NRD9 1551 aa17.36■□□□□ 0.37
CTHRC1-202ENST00000415886 BBOX1O75936 387 aa17.35■□□□□ 0.37
CTHRC1-202ENST00000415886 YDJCA8MPS7 323 aa17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 RGS19P49795 217 aa17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 BRPF1P55201 1214 aaPredicted RBP17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 TNIP1Q15025 636 aa17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 NLRP10Q86W26 655 aa17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 HHIPL1Q96JK4 782 aa17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 MCOLN1Q9GZU1 580 aa17.34■□□□□ 0.37
CTHRC1-202ENST00000415886 CA12O43570 354 aa17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 AIMP1Q12904 312 aaKnown RBP17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 GRAPQ13588 217 aa17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 GRAPLQ8TC17 118 aaPredicted RBP17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 ZC3H15Q8WU90 426 aaKnown RBP17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 ZNF428Q96B54 188 aa17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 CFAP44Q96MT7 982 aa17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 TAF1P21675 1872 aa17.33■□□□□ 0.36
CTHRC1-202ENST00000415886 DLK2Q6UY11 383 aa17.32■□□□□ 0.36
CTHRC1-202ENST00000415886 CDC37L1Q7L3B6 337 aa17.32■□□□□ 0.36
CTHRC1-202ENST00000415886 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
CTHRC1-202ENST00000415886 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
CTHRC1-202ENST00000415886 ZIC5Q96T25 663 aa17.32■□□□□ 0.36
CTHRC1-202ENST00000415886 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
CTHRC1-202ENST00000415886 HSP90AB3PQ58FF7 597 aa17.31■□□□□ 0.36
CTHRC1-202ENST00000415886 USP48Q86UV5 1035 aa17.31■□□□□ 0.36
CTHRC1-202ENST00000415886 MICALL2Q8IY33 904 aa17.31■□□□□ 0.36
CTHRC1-202ENST00000415886 TRMT112Q9UI30 125 aaKnown RBP17.31■□□□□ 0.36
CTHRC1-202ENST00000415886 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
CTHRC1-202ENST00000415886 SH3TC1Q8TE82 1336 aa17.3■□□□□ 0.36
CTHRC1-202ENST00000415886 MYBBP1AQ9BQG0 1328 aaKnown RBP17.3■□□□□ 0.36
CTHRC1-202ENST00000415886 CASP8AP2Q9UKL3 1982 aa17.3■□□□□ 0.36
CTHRC1-202ENST00000415886 RIPK4P57078 832 aa17.3■□□□□ 0.36
CTHRC1-202ENST00000415886 TCIRG1Q13488 830 aa17.3■□□□□ 0.36
CTHRC1-202ENST00000415886 DDX60Q8IY21 1712 aaKnown RBP17.3■□□□□ 0.36
CTHRC1-202ENST00000415886 H7C1D1 291 aa17.29■□□□□ 0.36
CTHRC1-202ENST00000415886 HUNKP57058 714 aa17.29■□□□□ 0.36
CTHRC1-202ENST00000415886 NOGQ13253 232 aa17.29■□□□□ 0.36
CTHRC1-202ENST00000415886 DGKZQ13574 1117 aa17.29■□□□□ 0.36
CTHRC1-202ENST00000415886 SAMD7Q7Z3H4 446 aa17.29■□□□□ 0.36
CTHRC1-202ENST00000415886 COL4A1P02462 1669 aa17.29■□□□□ 0.36
CTHRC1-202ENST00000415886 PSMD14O00487 310 aa17.28■□□□□ 0.36
CTHRC1-202ENST00000415886 EGFRP00533 1210 aa17.28■□□□□ 0.36
CTHRC1-202ENST00000415886 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
CTHRC1-202ENST00000415886 KRT24Q2M2I5 525 aa17.28■□□□□ 0.36
CTHRC1-202ENST00000415886 DBNDD1Q9H9R9 158 aa17.28■□□□□ 0.36
CTHRC1-202ENST00000415886 TBC1D10BQ4KMP7 808 aaPredicted RBP17.27■□□□□ 0.36
CTHRC1-202ENST00000415886 TMC4Q7Z404 712 aa17.27■□□□□ 0.36
CTHRC1-202ENST00000415886 BABAM1Q9NWV8 329 aa17.27■□□□□ 0.36
CTHRC1-202ENST00000415886 RIMBP2O15034 1052 aa17.26■□□□□ 0.35
CTHRC1-202ENST00000415886 WASHC4Q2M389 1173 aa17.26■□□□□ 0.35
CTHRC1-202ENST00000415886 DPF2Q92785 391 aa17.26■□□□□ 0.35
CTHRC1-202ENST00000415886 CELF1Q92879 486 aaKnown RBP17.26■□□□□ 0.35
CTHRC1-202ENST00000415886 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
CTHRC1-202ENST00000415886 FAM155AB1AL88 458 aaPredicted RBP17.25■□□□□ 0.35
CTHRC1-202ENST00000415886 ADM5C9JUS6 153 aa17.25■□□□□ 0.35
CTHRC1-202ENST00000415886 TMPOP42166 694 aaKnown RBP17.25■□□□□ 0.35
CTHRC1-202ENST00000415886 KRT26Q7Z3Y9 468 aa17.25■□□□□ 0.35
CTHRC1-202ENST00000415886 GBA2Q9HCG7 927 aaPredicted RBP17.25■□□□□ 0.35
CTHRC1-202ENST00000415886 KCNQ5Q9NR82 932 aa17.25■□□□□ 0.35
CTHRC1-202ENST00000415886 CHPF2Q9P2E5 772 aa17.25■□□□□ 0.35
CTHRC1-202ENST00000415886 ZNF316A6NFI3 1004 aaPredicted RBP17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 C6orf229H3BNL8 230 aa17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 GPSM2P81274 684 aa17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 RBM26Q5T8P6 1007 aaKnown RBP17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 RGMBQ6NW40 437 aa17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 FAM89AQ96GI7 184 aa17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 PRKRIP1Q9H875 184 aaPredicted RBP17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 POLLQ9UGP5 575 aa17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 RTL9Q8NET4 1388 aa17.24■□□□□ 0.35
CTHRC1-202ENST00000415886 ECE2O60344 883 aa17.23■□□□□ 0.35
CTHRC1-202ENST00000415886 LMOD3Q0VAK6 560 aa17.23■□□□□ 0.35
CTHRC1-202ENST00000415886 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
CTHRC1-202ENST00000415886 ATP5J2-PTCD1G3V325 749 aa17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 RPS12P25398 132 aaKnown RBP17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 SF3B3Q15393 1217 aaKnown RBP17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 C2orf69Q8N8R5 385 aa17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 PLBD2Q8NHP8 589 aa17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 DCPSQ96C86 337 aaKnown RBP17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 ISCA1Q9BUE6 129 aa17.22■□□□□ 0.35
CTHRC1-202ENST00000415886 KIF23Q02241 960 aaPredicted RBP17.21■□□□□ 0.35
CTHRC1-202ENST00000415886 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms