RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 PGBD3Q8N328 593 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 NEUROD4Q9HD90 331 aa9.18□□□□□ -0.94
EPHA4-204ENST00000415749 DNMT3AQ9Y6K1 912 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-204ENST00000415749 ZNF518AQ6AHZ1 1483 aa9.17□□□□□ -0.94
EPHA4-204ENST00000415749 CNTLNQ9NXG0 1405 aa9.17□□□□□ -0.94
EPHA4-204ENST00000415749 RBM47A0AV96 593 aaKnown RBP9.17□□□□□ -0.94
EPHA4-204ENST00000415749 H3BRB1 525 aa9.17□□□□□ -0.94
EPHA4-204ENST00000415749 ICMTO60725 284 aa9.17□□□□□ -0.94
EPHA4-204ENST00000415749 F11P03951 625 aa9.17□□□□□ -0.94
EPHA4-204ENST00000415749 BRD2P25440 801 aaKnown RBP9.17□□□□□ -0.94
EPHA4-204ENST00000415749 ARSJQ5FYB0 599 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-204ENST00000415749 ABTB2Q8N961 1025 aa9.17□□□□□ -0.94
EPHA4-204ENST00000415749 TUT1Q9H6E5 874 aaKnown RBP9.17□□□□□ -0.94
EPHA4-204ENST00000415749 ANKIB1Q9P2G1 1089 aa9.17□□□□□ -0.94
EPHA4-204ENST00000415749 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
EPHA4-204ENST00000415749 C11orf95C9JLR9 678 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-204ENST00000415749 FAM13AO94988 1023 aa9.16□□□□□ -0.94
EPHA4-204ENST00000415749 ATP4AP20648 1035 aa9.16□□□□□ -0.94
EPHA4-204ENST00000415749 PTSQ03393 145 aa9.16□□□□□ -0.94
EPHA4-204ENST00000415749 GAS2L1Q99501 681 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-204ENST00000415749 SAP130Q9H0E3 1048 aa9.16□□□□□ -0.94
EPHA4-204ENST00000415749 STIM2Q9P246 746 aa9.16□□□□□ -0.94
EPHA4-204ENST00000415749 NPATQ14207 1427 aa9.15□□□□□ -0.94
EPHA4-204ENST00000415749 DGKZQ13574 1117 aa9.15□□□□□ -0.94
EPHA4-204ENST00000415749 ANO2Q9NQ90 1003 aa9.15□□□□□ -0.94
EPHA4-204ENST00000415749 BIN2Q9UBW5 565 aaPredicted RBP9.15□□□□□ -0.94
EPHA4-204ENST00000415749 LRFN2Q9ULH4 789 aa9.15□□□□□ -0.94
EPHA4-204ENST00000415749 GJA3Q9Y6H8 435 aa9.15□□□□□ -0.94
EPHA4-204ENST00000415749 AGLP35573 1532 aa9.15□□□□□ -0.95
EPHA4-204ENST00000415749 LBRQ14739 615 aaKnown RBP9.14□□□□□ -0.95
EPHA4-204ENST00000415749 EFHC2Q5JST6 749 aa9.14□□□□□ -0.95
EPHA4-204ENST00000415749 ALKBH2Q6NS38 261 aa9.14□□□□□ -0.95
EPHA4-204ENST00000415749 CRISPLD1Q9H336 500 aa9.14□□□□□ -0.95
EPHA4-204ENST00000415749 GPAMQ9HCL2 828 aa9.14□□□□□ -0.95
EPHA4-204ENST00000415749 CDK13Q14004 1512 aaKnown RBP9.14□□□□□ -0.95
EPHA4-204ENST00000415749 MLH3Q9UHC1 1453 aa9.14□□□□□ -0.95
EPHA4-204ENST00000415749 DIP2CQ9Y2E4 1556 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 SLC35F4A4IF30 521 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 H7C1W4 665 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 TNFRSF10BO14763 440 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 HMGB1P09429 215 aaKnown RBP9.13□□□□□ -0.95
EPHA4-204ENST00000415749 NPR3P17342 541 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 IFT43Q96FT9 208 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 ZIC5Q96T25 663 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
EPHA4-204ENST00000415749 KDM5CP41229 1560 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 REREQ9P2R6 1566 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 SENP3-EIF4A1A0A087X0R7 540 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 A0A1W2PNR3 127 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 TGFBR3LH3BV60 316 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 SNRPBP14678 240 aaKnown RBP9.12□□□□□ -0.95
EPHA4-204ENST00000415749 MTMR3Q13615 1198 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 IER5Q5VY09 327 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 RIPOR1Q6ZS17 1223 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 NLRP8Q86W28 1048 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 CCDC155Q8N6L0 562 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 SUSD3Q96L08 255 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 IGSF5Q9NSI5 407 aa9.12□□□□□ -0.95
EPHA4-204ENST00000415749 RGS17Q9UGC6 210 aaPredicted RBP9.12□□□□□ -0.95
EPHA4-204ENST00000415749 ARHGAP5Q13017 1502 aa9.11□□□□□ -0.95
EPHA4-204ENST00000415749 PLA2R1Q13018 1463 aa9.11□□□□□ -0.95
EPHA4-204ENST00000415749 MPSTP25325 297 aa9.11□□□□□ -0.95
EPHA4-204ENST00000415749 NOM1Q5C9Z4 860 aaKnown RBP9.11□□□□□ -0.95
EPHA4-204ENST00000415749 C7orf43Q8WVR3 580 aa9.11□□□□□ -0.95
EPHA4-204ENST00000415749 GMCL1Q96IK5 515 aa9.11□□□□□ -0.95
EPHA4-204ENST00000415749 RUBCNLQ9H714 662 aa9.11□□□□□ -0.95
EPHA4-204ENST00000415749 FAM13BQ9NYF5 915 aa9.11□□□□□ -0.95
EPHA4-204ENST00000415749 TCOF1Q13428 1488 aaKnown RBP9.1□□□□□ -0.95
EPHA4-204ENST00000415749 LCE2BO14633 110 aa9.1□□□□□ -0.95
EPHA4-204ENST00000415749 AAMPQ13685 434 aa9.1□□□□□ -0.95
EPHA4-204ENST00000415749 GGT6Q6P531 493 aa9.1□□□□□ -0.95
EPHA4-204ENST00000415749 FIGNL1Q6PIW4 674 aa9.1□□□□□ -0.95
EPHA4-204ENST00000415749 MYO5CQ9NQX4 1742 aa9.1□□□□□ -0.95
EPHA4-204ENST00000415749 PTPRKQ15262 1439 aa9.09□□□□□ -0.95
EPHA4-204ENST00000415749 HSP90B1P14625 803 aaKnown RBP9.09□□□□□ -0.95
EPHA4-204ENST00000415749 LRRC69Q6ZNQ3 347 aa9.09□□□□□ -0.95
EPHA4-204ENST00000415749 MRRFQ96E11 262 aaKnown RBP9.09□□□□□ -0.95
EPHA4-204ENST00000415749 HSH2DQ96JZ2 352 aa9.09□□□□□ -0.95
EPHA4-204ENST00000415749 NUCKS1Q9H1E3 243 aaKnown RBP9.09□□□□□ -0.95
EPHA4-204ENST00000415749 KIAA1522Q9P206 1035 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-204ENST00000415749 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
EPHA4-204ENST00000415749 SHANK2Q9UPX8 1470 aa9.08□□□□□ -0.96
EPHA4-204ENST00000415749 TROQ12816 1431 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-204ENST00000415749 EIF1AXP47813 144 aaKnown RBP9.08□□□□□ -0.96
EPHA4-204ENST00000415749 SAMD5Q5TGI4 173 aa9.08□□□□□ -0.96
EPHA4-204ENST00000415749 ANKLE2Q86XL3 938 aa9.08□□□□□ -0.96
EPHA4-204ENST00000415749 TREML1Q86YW5 311 aa9.08□□□□□ -0.96
EPHA4-204ENST00000415749 TRIM22Q8IYM9 498 aa9.08□□□□□ -0.96
EPHA4-204ENST00000415749 CPS1P31327 1500 aa9.07□□□□□ -0.96
EPHA4-204ENST00000415749 MICAL2O94851 1124 aa9.07□□□□□ -0.96
EPHA4-204ENST00000415749 ERCC3P19447 782 aa9.07□□□□□ -0.96
EPHA4-204ENST00000415749 ITGA6P23229 1130 aa9.07□□□□□ -0.96
EPHA4-204ENST00000415749 DNAJC14Q6Y2X3 702 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-204ENST00000415749 ETFBKMTQ8IXQ9 262 aa9.07□□□□□ -0.96
EPHA4-204ENST00000415749 ZNF280CQ8ND82 737 aa9.07□□□□□ -0.96
EPHA4-204ENST00000415749 PUS7Q96PZ0 661 aaKnown RBP9.07□□□□□ -0.96
EPHA4-204ENST00000415749 BCS1LQ9Y276 419 aa9.07□□□□□ -0.96
EPHA4-204ENST00000415749 SPAG9O60271 1321 aaKnown RBP9.06□□□□□ -0.96
EPHA4-204ENST00000415749 CLIP1P30622 1438 aa9.06□□□□□ -0.96
EPHA4-204ENST00000415749 NDUFB5O43674 189 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms