RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 GIGYF2Q6Y7W6 1299 aaKnown RBP12.46□□□□□ -0.41
LINC01090-201ENST00000415357 FAM9BQ8IZU0 186 aa12.46□□□□□ -0.41
LINC01090-201ENST00000415357 TSR2Q969E8 191 aaKnown RBP12.46□□□□□ -0.41
LINC01090-201ENST00000415357 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC01090-201ENST00000415357 KIF3CO14782 793 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 HOXB7P09629 217 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 SRGNP10124 158 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 SUSD4Q5VX71 490 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 TPTE2Q6XPS3 522 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 ZNF34Q8IZ26 560 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
LINC01090-201ENST00000415357 LARP6Q9BRS8 491 aaKnown RBP12.45□□□□□ -0.42
LINC01090-201ENST00000415357 GPHNQ9NQX3 736 aaPredicted RBP12.45□□□□□ -0.42
LINC01090-201ENST00000415357 ANKRD36CQ5JPF3 1778 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 C21orf2O43822 256 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 NTSR2O95665 410 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 GTF2E1P29083 439 aaPredicted RBP12.44□□□□□ -0.42
LINC01090-201ENST00000415357 CCDC27Q2M243 656 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 C9orf131Q5VYM1 1079 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 ZNF428Q96B54 188 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 PDZRN3Q9UPQ7 1066 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
LINC01090-201ENST00000415357 PRELPP51888 382 aa12.43□□□□□ -0.42
LINC01090-201ENST00000415357 STYK1Q6J9G0 422 aa12.43□□□□□ -0.42
LINC01090-201ENST00000415357 PRPF40BQ6NWY9 871 aaKnown RBP12.43□□□□□ -0.42
LINC01090-201ENST00000415357 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
LINC01090-201ENST00000415357 MASTLQ96GX5 879 aa12.43□□□□□ -0.42
LINC01090-201ENST00000415357 NYXQ9GZU5 481 aa12.43□□□□□ -0.42
LINC01090-201ENST00000415357 RNF181Q9P0P0 153 aa12.43□□□□□ -0.42
LINC01090-201ENST00000415357 DBF4Q9UBU7 674 aaPredicted RBP12.43□□□□□ -0.42
LINC01090-201ENST00000415357 ARFGEF2Q9Y6D5 1785 aa12.43□□□□□ -0.42
LINC01090-201ENST00000415357 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
LINC01090-201ENST00000415357 NFKBIEO00221 500 aa12.42□□□□□ -0.42
LINC01090-201ENST00000415357 CNKSR1Q969H4 720 aa12.42□□□□□ -0.42
LINC01090-201ENST00000415357 KLRG2A4D1S0 409 aaPredicted RBP12.41□□□□□ -0.42
LINC01090-201ENST00000415357 TCERG1O14776 1098 aaKnown RBP12.41□□□□□ -0.42
LINC01090-201ENST00000415357 NPR1P16066 1061 aa12.41□□□□□ -0.42
LINC01090-201ENST00000415357 DSG2Q14126 1118 aa12.41□□□□□ -0.42
LINC01090-201ENST00000415357 PARP10Q53GL7 1025 aa12.41□□□□□ -0.42
LINC01090-201ENST00000415357 DDX27Q96GQ7 796 aaKnown RBP12.41□□□□□ -0.42
LINC01090-201ENST00000415357 PHAXQ9H814 394 aaKnown RBP12.41□□□□□ -0.42
LINC01090-201ENST00000415357 GPBP1L1Q9HC44 474 aaPredicted RBP12.41□□□□□ -0.42
LINC01090-201ENST00000415357 SBF1O95248 1867 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 RIC1Q4ADV7 1423 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 TCIRG1Q13488 830 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 OLFM4Q6UX06 510 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 SYNE4Q8N205 404 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 PLBD2Q8NHP8 589 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 HYPKQ9NX55 129 aa12.4□□□□□ -0.42
LINC01090-201ENST00000415357 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.43
LINC01090-201ENST00000415357 IL16Q14005 1332 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 ATP5J2-PTCD1G3V325 749 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 CRY2Q49AN0 593 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 HSP90AB3PQ58FF7 597 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 UTP14AQ9BVJ6 771 aaKnown RBP12.39□□□□□ -0.43
LINC01090-201ENST00000415357 FER1L6Q2WGJ9 1857 aa12.39□□□□□ -0.43
LINC01090-201ENST00000415357 LMNB1P20700 586 aa12.38□□□□□ -0.43
LINC01090-201ENST00000415357 FOXK1P85037 733 aa12.38□□□□□ -0.43
LINC01090-201ENST00000415357 TWISTNBQ3B726 338 aaPredicted RBP12.38□□□□□ -0.43
LINC01090-201ENST00000415357 CCDC30Q5VVM6 783 aa12.38□□□□□ -0.43
LINC01090-201ENST00000415357 C7orf43Q8WVR3 580 aa12.38□□□□□ -0.43
LINC01090-201ENST00000415357 HCLS1P14317 486 aaPredicted RBP12.37□□□□□ -0.43
LINC01090-201ENST00000415357 C1QTNF8P60827 252 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 MFSD10Q14728 455 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 PLPP6Q8IY26 295 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
LINC01090-201ENST00000415357 ISCA1Q9BUE6 129 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 NMRK2Q9NPI5 230 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 TRMT112Q9UI30 125 aaKnown RBP12.37□□□□□ -0.43
LINC01090-201ENST00000415357 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
LINC01090-201ENST00000415357 LAMB2P55268 1798 aa12.36□□□□□ -0.43
LINC01090-201ENST00000415357 EXOSC9Q06265 439 aaKnown RBP12.36□□□□□ -0.43
LINC01090-201ENST00000415357 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
LINC01090-201ENST00000415357 RIC3Q7Z5B4 369 aa12.36□□□□□ -0.43
LINC01090-201ENST00000415357 WDR63Q8IWG1 891 aa12.36□□□□□ -0.43
LINC01090-201ENST00000415357 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
LINC01090-201ENST00000415357 DDX60Q8IY21 1712 aaKnown RBP12.35□□□□□ -0.43
LINC01090-201ENST00000415357 ALDH1B1P30837 517 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
LINC01090-201ENST00000415357 RTL5Q5HYW3 569 aaPredicted RBP12.35□□□□□ -0.43
LINC01090-201ENST00000415357 SLC10A5Q5PT55 438 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 G2E3Q7L622 706 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 MYD88Q99836 296 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 SNED1Q8TER0 1413 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 RNF123Q5XPI4 1314 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 LTBP3Q9NS15 1303 aa12.35□□□□□ -0.43
LINC01090-201ENST00000415357 RBM17Q96I25 401 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms