RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 LRSAM1Q6UWE0 723 aa24.29■■□□□ 1.48
AP1S3-205ENST00000415298 CCDC189A1A4V9 331 aa24.28■■□□□ 1.48
AP1S3-205ENST00000415298 DNAJC21Q5F1R6 531 aaKnown RBP24.28■■□□□ 1.48
AP1S3-205ENST00000415298 NBPF10Q6P3W6 841 aaKnown RBP24.28■■□□□ 1.48
AP1S3-205ENST00000415298 MYO1CO00159 1063 aa24.27■■□□□ 1.48
AP1S3-205ENST00000415298 DOT1LQ8TEK3 1739 aa24.27■■□□□ 1.48
AP1S3-205ENST00000415298 PTCD1O75127 700 aaKnown RBP24.27■■□□□ 1.48
AP1S3-205ENST00000415298 C10orf67Q8IYJ2 551 aa24.27■■□□□ 1.48
AP1S3-205ENST00000415298 GOLGA6L1Q8N7Z2 621 aa24.27■■□□□ 1.48
AP1S3-205ENST00000415298 CCDC91Q7Z6B0 441 aa24.26■■□□□ 1.47
AP1S3-205ENST00000415298 TTC5Q8N0Z6 440 aa24.26■■□□□ 1.47
AP1S3-205ENST00000415298 BRWD3Q6RI45 1802 aa24.25■■□□□ 1.47
AP1S3-205ENST00000415298 DRC1Q96MC2 740 aa24.25■■□□□ 1.47
AP1S3-205ENST00000415298 ZNF446Q9NWS9 450 aa24.25■■□□□ 1.47
AP1S3-205ENST00000415298 BCL9O00512 1426 aa24.25■■□□□ 1.47
AP1S3-205ENST00000415298 EIF2S2P20042 333 aaKnown RBP24.25■■□□□ 1.47
AP1S3-205ENST00000415298 SSR1P43307 286 aaKnown RBP24.25■■□□□ 1.47
AP1S3-205ENST00000415298 NOL10Q9BSC4 688 aaKnown RBP24.25■■□□□ 1.47
AP1S3-205ENST00000415298 ATG3Q9NT62 314 aa24.25■■□□□ 1.47
AP1S3-205ENST00000415298 GIGYF1O75420 1035 aaPredicted RBP24.24■■□□□ 1.47
AP1S3-205ENST00000415298 CT47B1P0C2W7 299 aaPredicted RBP24.24■■□□□ 1.47
AP1S3-205ENST00000415298 SSFA2P28290 1259 aa24.24■■□□□ 1.47
AP1S3-205ENST00000415298 GSCP56915 257 aaPredicted RBP24.24■■□□□ 1.47
AP1S3-205ENST00000415298 C17orf53Q8N3J3 647 aaPredicted RBP24.24■■□□□ 1.47
AP1S3-205ENST00000415298 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.24■■□□□ 1.47
AP1S3-205ENST00000415298 ATP2B1P20020 1258 aa24.23■■□□□ 1.47
AP1S3-205ENST00000415298 SYT10Q6XYQ8 523 aa24.23■■□□□ 1.47
AP1S3-205ENST00000415298 KRT27Q7Z3Y8 459 aa24.23■■□□□ 1.47
AP1S3-205ENST00000415298 HEG1Q9ULI3 1381 aa24.22■■□□□ 1.47
AP1S3-205ENST00000415298 DEF6Q9H4E7 631 aa24.22■■□□□ 1.47
AP1S3-205ENST00000415298 TRIM66O15016 1216 aa24.21■■□□□ 1.47
AP1S3-205ENST00000415298 PSMD1Q99460 953 aa24.21■■□□□ 1.47
AP1S3-205ENST00000415298 BSDC1Q9NW68 430 aaPredicted RBP24.21■■□□□ 1.47
AP1S3-205ENST00000415298 TNNQ9UQP3 1299 aa24.21■■□□□ 1.47
AP1S3-205ENST00000415298 TNNT1P13805 278 aa24.21■■□□□ 1.47
AP1S3-205ENST00000415298 USP16Q9Y5T5 823 aa24.21■■□□□ 1.47
AP1S3-205ENST00000415298 A0A1B0GUL7 405 aa24.2■■□□□ 1.46
AP1S3-205ENST00000415298 PPP1R12AO14974 1030 aaPredicted RBP24.2■■□□□ 1.46
AP1S3-205ENST00000415298 TSGA10IPQ3SY00 556 aa24.2■■□□□ 1.46
AP1S3-205ENST00000415298 LRCH2Q5VUJ6 765 aa24.19■■□□□ 1.46
AP1S3-205ENST00000415298 FMNL2Q96PY5 1086 aa24.19■■□□□ 1.46
AP1S3-205ENST00000415298 ZKSCAN8Q15776 578 aaPredicted RBP24.19■■□□□ 1.46
AP1S3-205ENST00000415298 TPRNQ4KMQ1 711 aa24.19■■□□□ 1.46
AP1S3-205ENST00000415298 TXLNBQ8N3L3 684 aa24.19■■□□□ 1.46
AP1S3-205ENST00000415298 MRPL50Q8N5N7 158 aaKnown RBP24.19■■□□□ 1.46
AP1S3-205ENST00000415298 RBM42Q9BTD8 480 aaKnown RBP24.19■■□□□ 1.46
AP1S3-205ENST00000415298 LMBRD1Q9NUN5 540 aa24.19■■□□□ 1.46
AP1S3-205ENST00000415298 ANXA1P04083 346 aa24.18■■□□□ 1.46
AP1S3-205ENST00000415298 HDGFL1Q5TGJ6 251 aa24.18■■□□□ 1.46
AP1S3-205ENST00000415298 KIF1BPQ96EK5 621 aa24.18■■□□□ 1.46
AP1S3-205ENST00000415298 ALDH1L2Q3SY69 923 aa24.18■■□□□ 1.46
AP1S3-205ENST00000415298 SLC4A9Q96Q91 983 aa24.18■■□□□ 1.46
AP1S3-205ENST00000415298 NOB1Q9ULX3 412 aaKnown RBP24.18■■□□□ 1.46
AP1S3-205ENST00000415298 SLC4A2P04920 1241 aa24.17■■□□□ 1.46
AP1S3-205ENST00000415298 CALRP27797 417 aaKnown RBP24.17■■□□□ 1.46
AP1S3-205ENST00000415298 NBPF5PQ86XG9 351 aaPredicted RBP24.17■■□□□ 1.46
AP1S3-205ENST00000415298 ZNF397Q8NF99 534 aaPredicted RBP24.17■■□□□ 1.46
AP1S3-205ENST00000415298 TTC12Q9H892 705 aaPredicted RBP24.17■■□□□ 1.46
AP1S3-205ENST00000415298 RGS12O14924 1447 aa24.17■■□□□ 1.46
AP1S3-205ENST00000415298 KCPQ6ZWJ8 1503 aa24.17■■□□□ 1.46
AP1S3-205ENST00000415298 PIP4K2AP48426 406 aaPredicted RBP24.16■■□□□ 1.46
AP1S3-205ENST00000415298 SART3Q15020 963 aaKnown RBP24.16■■□□□ 1.46
AP1S3-205ENST00000415298 SNRPA1P09661 255 aaKnown RBP24.16■■□□□ 1.46
AP1S3-205ENST00000415298 G2E3Q7L622 706 aa24.16■■□□□ 1.46
AP1S3-205ENST00000415298 ZNF428Q96B54 188 aa24.16■■□□□ 1.46
AP1S3-205ENST00000415298 PAPPAQ13219 1627 aa24.15■■□□□ 1.46
AP1S3-205ENST00000415298 MCTP1Q6DN14 999 aa24.15■■□□□ 1.46
AP1S3-205ENST00000415298 CLUAP1Q96AJ1 413 aa24.15■■□□□ 1.46
AP1S3-205ENST00000415298 C5P01031 1676 aa24.15■■□□□ 1.46
AP1S3-205ENST00000415298 SWT1Q5T5J6 900 aaKnown RBP24.14■■□□□ 1.46
AP1S3-205ENST00000415298 CCDC30Q5VVM6 783 aa24.14■■□□□ 1.46
AP1S3-205ENST00000415298 OTUD6BQ8N6M0 293 aa24.14■■□□□ 1.46
AP1S3-205ENST00000415298 CHPF2Q9P2E5 772 aa24.14■■□□□ 1.46
AP1S3-205ENST00000415298 UBR2Q8IWV8 1755 aa24.14■■□□□ 1.45
AP1S3-205ENST00000415298 CALR3Q96L12 384 aaKnown RBP24.14■■□□□ 1.45
AP1S3-205ENST00000415298 PROSER3Q2NL68 480 aa24.13■■□□□ 1.45
AP1S3-205ENST00000415298 TTC31Q49AM3 519 aaPredicted RBP24.13■■□□□ 1.45
AP1S3-205ENST00000415298 RNF214Q8ND24 703 aa24.13■■□□□ 1.45
AP1S3-205ENST00000415298 KIAA1524Q8TCG1 905 aa24.13■■□□□ 1.45
AP1S3-205ENST00000415298 KCNQ4P56696 695 aa24.13■■□□□ 1.45
AP1S3-205ENST00000415298 HOXB7P09629 217 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 ATP6V1AP38606 617 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 PHAXQ9H814 394 aaKnown RBP24.12■■□□□ 1.45
AP1S3-205ENST00000415298 ST7Q9NRC1 585 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 CWC15Q9P013 229 aaKnown RBP24.12■■□□□ 1.45
AP1S3-205ENST00000415298 SBF2Q86WG5 1849 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 SYCE3A1L190 88 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 TRIM37O94972 964 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 FAM196AQ6ZSG2 479 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 LCMT1Q9UIC8 334 aa24.12■■□□□ 1.45
AP1S3-205ENST00000415298 SMTNL1A8MU46 457 aa24.11■■□□□ 1.45
AP1S3-205ENST00000415298 DNAJC10Q8IXB1 793 aa24.11■■□□□ 1.45
AP1S3-205ENST00000415298 KRBA2Q6ZNG9 492 aa24.11■■□□□ 1.45
AP1S3-205ENST00000415298 PANK1Q8TE04 598 aa24.11■■□□□ 1.45
AP1S3-205ENST00000415298 FAM212AQ96EL1 285 aa24.11■■□□□ 1.45
AP1S3-205ENST00000415298 KIF3CO14782 793 aa24.1■■□□□ 1.45
AP1S3-205ENST00000415298 RLBP1P12271 317 aa24.1■■□□□ 1.45
AP1S3-205ENST00000415298 TRDNQ13061 729 aa24.1■■□□□ 1.45
AP1S3-205ENST00000415298 NOM1Q5C9Z4 860 aaKnown RBP24.1■■□□□ 1.45
AP1S3-205ENST00000415298 BORCS6Q96GS4 357 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms