RNA–Protein interactions for RNA: ENST00000415251.6

PHTF2-204, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 1,738 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-204ENST00000415251 A0A0G2JLW4 131 aa17.17■□□□□ 0.34
PHTF2-204ENST00000415251 PDE6BP35913 854 aa17.17■□□□□ 0.34
PHTF2-204ENST00000415251 SF3B3Q15393 1217 aaKnown RBP17.17■□□□□ 0.34
PHTF2-204ENST00000415251 FAM161AQ3B820 660 aa17.17■□□□□ 0.34
PHTF2-204ENST00000415251 SIRT2Q8IXJ6 389 aa17.17■□□□□ 0.34
PHTF2-204ENST00000415251 CHMP4BQ9H444 224 aaKnown RBP17.17■□□□□ 0.34
PHTF2-204ENST00000415251 C10orf71Q711Q0 1435 aa17.17■□□□□ 0.34
PHTF2-204ENST00000415251 LAMB2P55268 1798 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 UTRNP46939 3433 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 MYH3P11055 1940 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 SRGNP10124 158 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 CRY2Q49AN0 593 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 CEP85Q6P2H3 762 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 KLHDC4Q8TBB5 520 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 WWC3Q9ULE0 1092 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
PHTF2-204ENST00000415251 CCDC152Q4G0S7 254 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 C2CD5Q86YS7 1000 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 FHDC1Q9C0D6 1143 aaPredicted RBP17.16■□□□□ 0.34
PHTF2-204ENST00000415251 HDAC5Q9UQL6 1122 aa17.16■□□□□ 0.34
PHTF2-204ENST00000415251 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
PHTF2-204ENST00000415251 DPEP1P16444 411 aa17.15■□□□□ 0.34
PHTF2-204ENST00000415251 ITGA6P23229 1130 aa17.15■□□□□ 0.34
PHTF2-204ENST00000415251 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
PHTF2-204ENST00000415251 NLGN2Q8NFZ4 835 aa17.15■□□□□ 0.34
PHTF2-204ENST00000415251 ZNF594Q96JF6 807 aaPredicted RBP17.15■□□□□ 0.34
PHTF2-204ENST00000415251 COL4A1P02462 1669 aa17.14■□□□□ 0.33
PHTF2-204ENST00000415251 H0YIN7 160 aa17.14■□□□□ 0.33
PHTF2-204ENST00000415251 KCNA3P22001 575 aa17.14■□□□□ 0.33
PHTF2-204ENST00000415251 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.334e-10■□□□□ 8.7
PHTF2-204ENST00000415251 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
PHTF2-204ENST00000415251 RIC1Q4ADV7 1423 aa17.14■□□□□ 0.33
PHTF2-204ENST00000415251 SLC51AQ86UW1 340 aa17.13■□□□□ 0.33
PHTF2-204ENST00000415251 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
PHTF2-204ENST00000415251 CELF1Q92879 486 aaKnown RBP17.13■□□□□ 0.33
PHTF2-204ENST00000415251 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
PHTF2-204ENST00000415251 RFX5P48382 616 aaPredicted RBP17.13■□□□□ 0.33
PHTF2-204ENST00000415251 IFIT5Q13325 482 aaKnown RBP17.13■□□□□ 0.33
PHTF2-204ENST00000415251 MTX1Q13505 466 aa17.13■□□□□ 0.33
PHTF2-204ENST00000415251 CCDC57Q2TAC2 916 aa17.13■□□□□ 0.33
PHTF2-204ENST00000415251 DDX46Q7L014 1031 aaKnown RBP17.13■□□□□ 0.33
PHTF2-204ENST00000415251 RPAP2Q8IXW5 612 aaPredicted RBP17.13■□□□□ 0.33
PHTF2-204ENST00000415251 TGFB2P61812 414 aa17.12■□□□□ 0.33
PHTF2-204ENST00000415251 MASTLQ96GX5 879 aa17.12■□□□□ 0.33
PHTF2-204ENST00000415251 SYT17Q9BSW7 474 aa17.12■□□□□ 0.33
PHTF2-204ENST00000415251 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
PHTF2-204ENST00000415251 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
PHTF2-204ENST00000415251 ANKRD18BA2A2Z9 1011 aa17.11■□□□□ 0.33
PHTF2-204ENST00000415251 NPR1P16066 1061 aa17.11■□□□□ 0.33
PHTF2-204ENST00000415251 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
PHTF2-204ENST00000415251 SSH3Q8TE77 659 aa17.11■□□□□ 0.33
PHTF2-204ENST00000415251 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
PHTF2-204ENST00000415251 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
PHTF2-204ENST00000415251 POLA2Q14181 598 aa17.1■□□□□ 0.33
PHTF2-204ENST00000415251 PUS3Q9BZE2 481 aaKnown RBP17.1■□□□□ 0.33
PHTF2-204ENST00000415251 SIL1Q9H173 461 aa17.1■□□□□ 0.33
PHTF2-204ENST00000415251 RPS8P62241 208 aaKnown RBP17.1■□□□□ 0.33
PHTF2-204ENST00000415251 IGHDP01880 384 aa17.09■□□□□ 0.33
PHTF2-204ENST00000415251 AAMPQ13685 434 aa17.09■□□□□ 0.33
PHTF2-204ENST00000415251 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
PHTF2-204ENST00000415251 RTL9Q8NET4 1388 aa17.09■□□□□ 0.33
PHTF2-204ENST00000415251 GRAPQ13588 217 aa17.08■□□□□ 0.32
PHTF2-204ENST00000415251 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
PHTF2-204ENST00000415251 TAF7LQ5H9L4 462 aa17.08■□□□□ 0.32
PHTF2-204ENST00000415251 STYK1Q6J9G0 422 aa17.08■□□□□ 0.32
PHTF2-204ENST00000415251 OLFM4Q6UX06 510 aa17.08■□□□□ 0.32
PHTF2-204ENST00000415251 GRAPLQ8TC17 118 aaPredicted RBP17.08■□□□□ 0.32
PHTF2-204ENST00000415251 ZNF219Q9P2Y4 722 aaPredicted RBP17.08■□□□□ 0.32
PHTF2-204ENST00000415251 KIAA1551Q9HCM1 1747 aa17.08■□□□□ 0.32
PHTF2-204ENST00000415251 ALDH1B1P30837 517 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 LDHAL6AQ6ZMR3 332 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 ANKRD18AQ8IVF6 992 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 CDC5LQ99459 802 aaKnown RBP17.07■□□□□ 0.32
PHTF2-204ENST00000415251 SURF6O75683 361 aaKnown RBP17.07■□□□□ 0.32
PHTF2-204ENST00000415251 PRPF40BQ6NWY9 871 aaKnown RBP17.07■□□□□ 0.32
PHTF2-204ENST00000415251 MPHOSPH8Q99549 860 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 COPRSQ9NQ92 184 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 PIM2Q9P1W9 311 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 PDZRN3Q9UPQ7 1066 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
PHTF2-204ENST00000415251 CACNA1SQ13698 1873 aa17.06■□□□□ 0.32
PHTF2-204ENST00000415251 IGHMBP2P38935 993 aaKnown RBP17.06■□□□□ 0.32
PHTF2-204ENST00000415251 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
PHTF2-204ENST00000415251 CNKSR1Q969H4 720 aa17.06■□□□□ 0.32
PHTF2-204ENST00000415251 HMMRO75330 724 aa17.05■□□□□ 0.32
PHTF2-204ENST00000415251 BBOX1O75936 387 aa17.05■□□□□ 0.32
PHTF2-204ENST00000415251 CNNM1Q9NRU3 951 aa17.05■□□□□ 0.32
PHTF2-204ENST00000415251 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
PHTF2-204ENST00000415251 SPEF2Q9C093 1822 aa17.05■□□□□ 0.32
PHTF2-204ENST00000415251 WTIPA6NIX2 430 aaPredicted RBP17.04■□□□□ 0.32
PHTF2-204ENST00000415251 APBB1O00213 710 aa17.04■□□□□ 0.32
PHTF2-204ENST00000415251 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
PHTF2-204ENST00000415251 HELBQ8NG08 1087 aaPredicted RBP17.04■□□□□ 0.32
PHTF2-204ENST00000415251 RIPOR2Q9Y4F9 1068 aa17.04■□□□□ 0.32
PHTF2-204ENST00000415251 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
PHTF2-204ENST00000415251 EYA2O00167 538 aa17.04■□□□□ 0.32
PHTF2-204ENST00000415251 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
PHTF2-204ENST00000415251 HDAC1Q13547 482 aaPredicted RBP17.04■□□□□ 0.32
PHTF2-204ENST00000415251 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms