RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 PACS2Q86VP3 889 aa12.01□□□□□ -0.49
LINC01888-201ENST00000415138 LRRC4BQ9NT99 713 aa12.01□□□□□ -0.49
LINC01888-201ENST00000415138 SEPT9Q9UHD8 586 aaPredicted RBP12.01□□□□□ -0.49
LINC01888-201ENST00000415138 IL16Q14005 1332 aa12.01□□□□□ -0.49
LINC01888-201ENST00000415138 C4BP0C0L5 1744 aa12□□□□□ -0.49
LINC01888-201ENST00000415138 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
LINC01888-201ENST00000415138 SLC15A2Q16348 729 aa12□□□□□ -0.49
LINC01888-201ENST00000415138 DNAJC10Q8IXB1 793 aa12□□□□□ -0.49
LINC01888-201ENST00000415138 FLAD1Q8NFF5 587 aa12□□□□□ -0.49
LINC01888-201ENST00000415138 ZFRQ96KR1 1074 aaKnown RBP12□□□□□ -0.49
LINC01888-201ENST00000415138 PPP4R2Q9NY27 417 aa12□□□□□ -0.49
LINC01888-201ENST00000415138 COL5A3P25940 1745 aaPredicted RBP12□□□□□ -0.49
LINC01888-201ENST00000415138 TJP1Q07157 1748 aa12□□□□□ -0.49
LINC01888-201ENST00000415138 ITPK1Q13572 414 aa11.99□□□□□ -0.49
LINC01888-201ENST00000415138 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
LINC01888-201ENST00000415138 RTCBQ9Y3I0 505 aaKnown RBP11.99□□□□□ -0.49
LINC01888-201ENST00000415138 KCPQ6ZWJ8 1503 aa11.99□□□□□ -0.49
LINC01888-201ENST00000415138 LAMB4A4D0S4 1761 aa11.99□□□□□ -0.49
LINC01888-201ENST00000415138 GNPATO15228 680 aa11.98□□□□□ -0.49
LINC01888-201ENST00000415138 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
LINC01888-201ENST00000415138 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
LINC01888-201ENST00000415138 RC3H1Q5TC82 1133 aaKnown RBP11.98□□□□□ -0.49
LINC01888-201ENST00000415138 TAF3Q5VWG9 929 aa11.98□□□□□ -0.49
LINC01888-201ENST00000415138 LINC00116Q8NCU8 138 aa11.98□□□□□ -0.49
LINC01888-201ENST00000415138 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
LINC01888-201ENST00000415138 E9PSI1 815 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 GIGYF1O75420 1035 aaPredicted RBP11.97□□□□□ -0.49
LINC01888-201ENST00000415138 ZNF853P0CG23 659 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 CLCN1P35523 988 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 CRKLP46109 303 aaKnown RBP11.97□□□□□ -0.49
LINC01888-201ENST00000415138 BCAMP50895 628 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 TRAPPC3LQ5T215 181 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 SLC4A9Q96Q91 983 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 CCDC87Q9NVE4 849 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 EP400Q96L91 3159 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 QSER1Q2KHR3 1735 aa11.97□□□□□ -0.49
LINC01888-201ENST00000415138 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
LINC01888-201ENST00000415138 UBR3Q6ZT12 1888 aa11.96□□□□□ -0.49
LINC01888-201ENST00000415138 CNTNAP4Q9C0A0 1308 aa11.96□□□□□ -0.49
LINC01888-201ENST00000415138 A0A087WZG4 1122 aa11.96□□□□□ -0.49
LINC01888-201ENST00000415138 ELL2O00472 640 aaPredicted RBP11.96□□□□□ -0.49
LINC01888-201ENST00000415138 CYP19A1P11511 503 aaPredicted RBP11.96□□□□□ -0.49
LINC01888-201ENST00000415138 OSBPP22059 807 aa11.96□□□□□ -0.49
LINC01888-201ENST00000415138 RFC4P35249 363 aa11.96□□□□□ -0.49
LINC01888-201ENST00000415138 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
LINC01888-201ENST00000415138 TSKSQ9UJT2 592 aa11.96□□□□□ -0.49
LINC01888-201ENST00000415138 USP16Q9Y5T5 823 aa11.96□□□□□ -0.49
LINC01888-201ENST00000415138 MYH14Q7Z406 1995 aaKnown RBP11.96□□□□□ -0.5
LINC01888-201ENST00000415138 TUBGCP6Q96RT7 1819 aa11.95□□□□□ -0.5
LINC01888-201ENST00000415138 SOWAHBA6NEL2 793 aa11.95□□□□□ -0.5
LINC01888-201ENST00000415138 RPS6KA4O75676 772 aa11.95□□□□□ -0.5
LINC01888-201ENST00000415138 PTMAP06454 111 aaKnown RBP11.95□□□□□ -0.5
LINC01888-201ENST00000415138 HOXB7P09629 217 aa11.95□□□□□ -0.5
LINC01888-201ENST00000415138 PRSS12P56730 875 aa11.95□□□□□ -0.5
LINC01888-201ENST00000415138 DUSP27Q5VZP5 1158 aa11.95□□□□□ -0.5
LINC01888-201ENST00000415138 ARHGEF1Q92888 912 aaKnown RBP11.95□□□□□ -0.5
LINC01888-201ENST00000415138 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
LINC01888-201ENST00000415138 CACNA1FO60840 1977 aa11.94□□□□□ -0.5
LINC01888-201ENST00000415138 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
LINC01888-201ENST00000415138 ZPR1O75312 459 aa11.94□□□□□ -0.5
LINC01888-201ENST00000415138 A1BGP04217 495 aa11.94□□□□□ -0.5
LINC01888-201ENST00000415138 SSFA2P28290 1259 aa11.94□□□□□ -0.5
LINC01888-201ENST00000415138 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
LINC01888-201ENST00000415138 HDGFL1Q5TGJ6 251 aa11.94□□□□□ -0.5
LINC01888-201ENST00000415138 MTERF4Q7Z6M4 381 aaKnown RBP11.94□□□□□ -0.5
LINC01888-201ENST00000415138 NECTIN2Q92692 538 aa11.94□□□□□ -0.5
LINC01888-201ENST00000415138 SECISBP2LQ93073 1101 aaKnown RBP11.94□□□□□ -0.5
LINC01888-201ENST00000415138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.93□□□□□ -0.5
LINC01888-201ENST00000415138 PRAMEF22A3QJZ6 481 aa11.93□□□□□ -0.5
LINC01888-201ENST00000415138 MYL6BP14649 208 aa11.93□□□□□ -0.5
LINC01888-201ENST00000415138 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
LINC01888-201ENST00000415138 RGS3P49796 1198 aa11.93□□□□□ -0.5
LINC01888-201ENST00000415138 EXOSC9Q06265 439 aaKnown RBP11.93□□□□□ -0.5
LINC01888-201ENST00000415138 TWISTNBQ3B726 338 aaPredicted RBP11.93□□□□□ -0.5
LINC01888-201ENST00000415138 CCDC30Q5VVM6 783 aa11.93□□□□□ -0.5
LINC01888-201ENST00000415138 INTS5Q6P9B9 1019 aaKnown RBP11.93□□□□□ -0.5
LINC01888-201ENST00000415138 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
LINC01888-201ENST00000415138 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 ZBED9Q6R2W3 1325 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 ZNF521Q96K83 1311 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 CLSTN1O94985 981 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 PTMSP20962 102 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
LINC01888-201ENST00000415138 L1TD1Q5T7N2 865 aaKnown RBP11.92□□□□□ -0.5
LINC01888-201ENST00000415138 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 C8orf58Q8NAV2 365 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 SLC16A10Q8TF71 515 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
LINC01888-201ENST00000415138 ZBTB1Q9Y2K1 713 aa11.92□□□□□ -0.5
LINC01888-201ENST00000415138 CLGNO14967 610 aa11.91□□□□□ -0.5
LINC01888-201ENST00000415138 KRT24Q2M2I5 525 aa11.91□□□□□ -0.5
LINC01888-201ENST00000415138 TPRNQ4KMQ1 711 aa11.91□□□□□ -0.5
LINC01888-201ENST00000415138 KIF6Q6ZMV9 814 aa11.91□□□□□ -0.5
LINC01888-201ENST00000415138 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
LINC01888-201ENST00000415138 KCNV2Q8TDN2 545 aa11.91□□□□□ -0.5
LINC01888-201ENST00000415138 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
LINC01888-201ENST00000415138 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.91□□□□□ -0.5
LINC01888-201ENST00000415138 PNPLA7Q6ZV29 1317 aa11.9□□□□□ -0.5
LINC01888-201ENST00000415138 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms