RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 ANKRD36CQ5JPF3 1778 aa22.85■■□□□ 1.25
UBE2D4-202ENST00000415051 TAF1P21675 1872 aa22.84■■□□□ 1.25
UBE2D4-202ENST00000415051 YDJCA8MPS7 323 aa22.84■■□□□ 1.25
UBE2D4-202ENST00000415051 RAD17O75943 681 aa22.84■■□□□ 1.25
UBE2D4-202ENST00000415051 KIAA2012Q0VF49 1180 aa22.84■■□□□ 1.25
UBE2D4-202ENST00000415051 PARP10Q53GL7 1025 aa22.83■■□□□ 1.25
UBE2D4-202ENST00000415051 CDC37L1Q7L3B6 337 aa22.83■■□□□ 1.25
UBE2D4-202ENST00000415051 PPP1R42Q7Z4L9 355 aa22.83■■□□□ 1.25
UBE2D4-202ENST00000415051 SUPT20HQ8NEM7 779 aa22.83■■□□□ 1.25
UBE2D4-202ENST00000415051 CCER1Q8TC90 406 aaPredicted RBP22.83■■□□□ 1.25
UBE2D4-202ENST00000415051 PNISRQ8TF01 805 aaKnown RBP22.83■■□□□ 1.25
UBE2D4-202ENST00000415051 NOGQ13253 232 aa22.82■■□□□ 1.24
UBE2D4-202ENST00000415051 PDIA6Q15084 440 aa22.82■■□□□ 1.24
UBE2D4-202ENST00000415051 DPP8Q6V1X1 898 aaPredicted RBP22.82■■□□□ 1.24
UBE2D4-202ENST00000415051 SP8Q8IXZ3 490 aa22.82■■□□□ 1.24
UBE2D4-202ENST00000415051 THUMPD2Q9BTF0 503 aaKnown RBP22.82■■□□□ 1.24
UBE2D4-202ENST00000415051 FAM155AB1AL88 458 aaPredicted RBP22.81■■□□□ 1.24
UBE2D4-202ENST00000415051 USP48Q86UV5 1035 aa22.81■■□□□ 1.24
UBE2D4-202ENST00000415051 UTP14AQ9BVJ6 771 aaKnown RBP22.81■■□□□ 1.24
UBE2D4-202ENST00000415051 BCL2L13Q9BXK5 485 aa22.81■■□□□ 1.24
UBE2D4-202ENST00000415051 CNOT7Q9UIV1 285 aaKnown RBP22.81■■□□□ 1.24
UBE2D4-202ENST00000415051 LRRC37AA6NMS7 1700 aa22.8■■□□□ 1.24
UBE2D4-202ENST00000415051 POLR2AP24928 1970 aaKnown RBP22.8■■□□□ 1.24
UBE2D4-202ENST00000415051 BBOX1O75936 387 aa22.8■■□□□ 1.24
UBE2D4-202ENST00000415051 HUNKP57058 714 aa22.8■■□□□ 1.24
UBE2D4-202ENST00000415051 MPNDQ8N594 471 aa22.8■■□□□ 1.24
UBE2D4-202ENST00000415051 TMX4Q9H1E5 349 aaPredicted RBP22.8■■□□□ 1.24
UBE2D4-202ENST00000415051 ERBB4Q15303 1308 aa22.8■■□□□ 1.24
UBE2D4-202ENST00000415051 TNIP1Q15025 636 aa22.79■■□□□ 1.24
UBE2D4-202ENST00000415051 PLEKHF1Q96S99 279 aa22.79■■□□□ 1.24
UBE2D4-202ENST00000415051 PROSER3Q2NL68 480 aa22.78■■□□□ 1.24
UBE2D4-202ENST00000415051 MICALL2Q8IY33 904 aa22.78■■□□□ 1.24
UBE2D4-202ENST00000415051 EGFRP00533 1210 aa22.77■■□□□ 1.24
UBE2D4-202ENST00000415051 HCLS1P14317 486 aaPredicted RBP22.77■■□□□ 1.24
UBE2D4-202ENST00000415051 ZBTB12Q9Y330 459 aaPredicted RBP22.77■■□□□ 1.24
UBE2D4-202ENST00000415051 ANXA1P04083 346 aa22.76■■□□□ 1.23
UBE2D4-202ENST00000415051 SAMD7Q7Z3H4 446 aa22.76■■□□□ 1.23
UBE2D4-202ENST00000415051 COL4A1P02462 1669 aa22.75■■□□□ 1.23
UBE2D4-202ENST00000415051 H7C1D1 291 aa22.75■■□□□ 1.23
UBE2D4-202ENST00000415051 RGMBQ6NW40 437 aa22.75■■□□□ 1.23
UBE2D4-202ENST00000415051 NLRP10Q86W26 655 aa22.75■■□□□ 1.23
UBE2D4-202ENST00000415051 SOX10P56693 466 aa22.74■■□□□ 1.23
UBE2D4-202ENST00000415051 GRAPQ13588 217 aa22.74■■□□□ 1.23
UBE2D4-202ENST00000415051 NFE2L2Q16236 605 aa22.74■■□□□ 1.23
UBE2D4-202ENST00000415051 GRAPLQ8TC17 118 aaPredicted RBP22.74■■□□□ 1.23
UBE2D4-202ENST00000415051 SAGE1Q9NXZ1 904 aa22.74■■□□□ 1.23
UBE2D4-202ENST00000415051 DDX60Q8IY21 1712 aaKnown RBP22.74■■□□□ 1.23
UBE2D4-202ENST00000415051 PSMD14O00487 310 aa22.73■■□□□ 1.23
UBE2D4-202ENST00000415051 KIF23Q02241 960 aaPredicted RBP22.73■■□□□ 1.23
UBE2D4-202ENST00000415051 DPF2Q92785 391 aa22.73■■□□□ 1.23
UBE2D4-202ENST00000415051 ADM5C9JUS6 153 aa22.72■■□□□ 1.23
UBE2D4-202ENST00000415051 TBC1D10BQ4KMP7 808 aaPredicted RBP22.72■■□□□ 1.23
UBE2D4-202ENST00000415051 KRT26Q7Z3Y9 468 aa22.72■■□□□ 1.23
UBE2D4-202ENST00000415051 GBA2Q9HCG7 927 aaPredicted RBP22.72■■□□□ 1.23
UBE2D4-202ENST00000415051 RNF186Q9NXI6 227 aa22.72■■□□□ 1.23
UBE2D4-202ENST00000415051 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
UBE2D4-202ENST00000415051 DDX46Q7L014 1031 aaKnown RBP22.71■■□□□ 1.23
UBE2D4-202ENST00000415051 KCNQ5Q9NR82 932 aa22.71■■□□□ 1.23
UBE2D4-202ENST00000415051 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
UBE2D4-202ENST00000415051 DBNDD1Q9H9R9 158 aa22.7■■□□□ 1.22
UBE2D4-202ENST00000415051 RTL9Q8NET4 1388 aa22.7■■□□□ 1.22
UBE2D4-202ENST00000415051 TRPA1O75762 1119 aa22.69■■□□□ 1.22
UBE2D4-202ENST00000415051 CCDC102AQ96A19 550 aa22.69■■□□□ 1.22
UBE2D4-202ENST00000415051 TSPYL4Q9UJ04 414 aa22.69■■□□□ 1.22
UBE2D4-202ENST00000415051 SCN9AQ15858 1988 aa22.69■■□□□ 1.22
UBE2D4-202ENST00000415051 SH3TC1Q8TE82 1336 aa22.68■■□□□ 1.22
UBE2D4-202ENST00000415051 ZNF157P51786 506 aaPredicted RBP22.68■■□□□ 1.22
UBE2D4-202ENST00000415051 COPS6Q7L5N1 327 aa22.68■■□□□ 1.22
UBE2D4-202ENST00000415051 CSRNP1Q96S65 589 aa22.68■■□□□ 1.22
UBE2D4-202ENST00000415051 TRMT112Q9UI30 125 aaKnown RBP22.68■■□□□ 1.22
UBE2D4-202ENST00000415051 SLC10A3P09131 477 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 TCIRG1Q13488 830 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 WASHC4Q2M389 1173 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 TMC4Q7Z404 712 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 C2orf69Q8N8R5 385 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 XAGE3Q8WTP9 111 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 ZNF428Q96B54 188 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 POLLQ9UGP5 575 aa22.67■■□□□ 1.22
UBE2D4-202ENST00000415051 ASTN2O75129 1339 aaPredicted RBP22.66■■□□□ 1.22
UBE2D4-202ENST00000415051 HSP90AB3PQ58FF7 597 aa22.66■■□□□ 1.22
UBE2D4-202ENST00000415051 CELF1Q92879 486 aaKnown RBP22.66■■□□□ 1.22
UBE2D4-202ENST00000415051 RIMBP2O15034 1052 aa22.65■■□□□ 1.22
UBE2D4-202ENST00000415051 NEFMP07197 916 aa22.65■■□□□ 1.22
UBE2D4-202ENST00000415051 AIMP1Q12904 312 aaKnown RBP22.65■■□□□ 1.22
UBE2D4-202ENST00000415051 RBM26Q5T8P6 1007 aaKnown RBP22.65■■□□□ 1.22
UBE2D4-202ENST00000415051 ECE2O60344 883 aa22.64■■□□□ 1.21
UBE2D4-202ENST00000415051 RPS12P25398 132 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-202ENST00000415051 GPSM2P81274 684 aa22.64■■□□□ 1.21
UBE2D4-202ENST00000415051 NECTIN2Q92692 538 aa22.64■■□□□ 1.21
UBE2D4-202ENST00000415051 DCPSQ96C86 337 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-202ENST00000415051 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.21
UBE2D4-202ENST00000415051 MKI67P46013 3256 aaKnown RBP22.63■■□□□ 1.21
UBE2D4-202ENST00000415051 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
UBE2D4-202ENST00000415051 KIF4BQ2VIQ3 1234 aa22.62■■□□□ 1.21
UBE2D4-202ENST00000415051 PRPF38BQ5VTL8 546 aaKnown RBP22.62■■□□□ 1.21
UBE2D4-202ENST00000415051 CTU1Q7Z7A3 348 aaKnown RBP22.62■■□□□ 1.21
UBE2D4-202ENST00000415051 GGA3Q9NZ52 723 aa22.62■■□□□ 1.21
UBE2D4-202ENST00000415051 SF3B3Q15393 1217 aaKnown RBP22.61■■□□□ 1.21
UBE2D4-202ENST00000415051 RASAL3Q86YV0 1011 aa22.61■■□□□ 1.21
UBE2D4-202ENST00000415051 CDCA5Q96FF9 252 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms