RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FAM177BA6PVY3 158 aa16.62■□□□□ 0.25
CNN3-203ENST00000415017 HCLS1P14317 486 aaPredicted RBP16.62■□□□□ 0.25
CNN3-203ENST00000415017 PTGER2P43116 358 aa16.62■□□□□ 0.25
CNN3-203ENST00000415017 CTSWP56202 376 aa16.62■□□□□ 0.25
CNN3-203ENST00000415017 C3orf67Q6ZVT6 689 aa16.62■□□□□ 0.25
CNN3-203ENST00000415017 BRIP1Q9BX63 1249 aa16.62■□□□□ 0.25
CNN3-203ENST00000415017 PPP4R2Q9NY27 417 aa16.62■□□□□ 0.25
CNN3-203ENST00000415017 COL4A1P02462 1669 aa16.62■□□□□ 0.25
CNN3-203ENST00000415017 LMBR1LQ6UX01 489 aa16.61■□□□□ 0.25
CNN3-203ENST00000415017 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
CNN3-203ENST00000415017 BRCA1P38398 1863 aaKnown RBP16.6■□□□□ 0.25
CNN3-203ENST00000415017 A0A1B0GUL6 1792 aa16.59■□□□□ 0.25
CNN3-203ENST00000415017 IGHDP01880 384 aa16.59■□□□□ 0.25
CNN3-203ENST00000415017 HOXA10P31260 410 aaPredicted RBP16.59■□□□□ 0.25
CNN3-203ENST00000415017 ST5P78524 1137 aa16.59■□□□□ 0.25
CNN3-203ENST00000415017 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
CNN3-203ENST00000415017 COPRSQ9NQ92 184 aa16.59■□□□□ 0.25
CNN3-203ENST00000415017 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
CNN3-203ENST00000415017 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
CNN3-203ENST00000415017 KDM2BQ8NHM5 1336 aa16.59■□□□□ 0.25
CNN3-203ENST00000415017 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
CNN3-203ENST00000415017 GTF2E1P29083 439 aaPredicted RBP16.58■□□□□ 0.24
CNN3-203ENST00000415017 PTPN12Q05209 780 aaKnown RBP16.58■□□□□ 0.24
CNN3-203ENST00000415017 GREM2Q9H772 168 aa16.58■□□□□ 0.24
CNN3-203ENST00000415017 DCTPP1Q9H773 170 aa16.58■□□□□ 0.24
CNN3-203ENST00000415017 SPEF2Q9C093 1822 aa16.58■□□□□ 0.24
CNN3-203ENST00000415017 LRRC37AA6NMS7 1700 aa16.57■□□□□ 0.24
CNN3-203ENST00000415017 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
CNN3-203ENST00000415017 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
CNN3-203ENST00000415017 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
CNN3-203ENST00000415017 HMMRO75330 724 aa16.56■□□□□ 0.24
CNN3-203ENST00000415017 PDE6BP35913 854 aa16.56■□□□□ 0.24
CNN3-203ENST00000415017 FAM161AQ3B820 660 aa16.56■□□□□ 0.24
CNN3-203ENST00000415017 CCDC152Q4G0S7 254 aa16.56■□□□□ 0.24
CNN3-203ENST00000415017 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
CNN3-203ENST00000415017 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
CNN3-203ENST00000415017 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
CNN3-203ENST00000415017 SRGNP10124 158 aa16.55■□□□□ 0.24
CNN3-203ENST00000415017 POLD1P28340 1107 aa16.55■□□□□ 0.24
CNN3-203ENST00000415017 ITGA6P23229 1130 aa16.54■□□□□ 0.24
CNN3-203ENST00000415017 CRAMP1Q96RY5 1269 aa16.54■□□□□ 0.24
CNN3-203ENST00000415017 SPON1Q9HCB6 807 aa16.54■□□□□ 0.24
CNN3-203ENST00000415017 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
CNN3-203ENST00000415017 CACNA1SQ13698 1873 aa16.53■□□□□ 0.24
CNN3-203ENST00000415017 CIAO1O76071 339 aa16.53■□□□□ 0.24
CNN3-203ENST00000415017 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
CNN3-203ENST00000415017 CCDC57Q2TAC2 916 aa16.53■□□□□ 0.24
CNN3-203ENST00000415017 ATG9AQ7Z3C6 839 aa16.53■□□□□ 0.24
CNN3-203ENST00000415017 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
CNN3-203ENST00000415017 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
CNN3-203ENST00000415017 SLX4Q8IY92 1834 aa16.52■□□□□ 0.24
CNN3-203ENST00000415017 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.24
CNN3-203ENST00000415017 KCNA3P22001 575 aa16.52■□□□□ 0.24
CNN3-203ENST00000415017 CCDC136Q96JN2 1154 aa16.52■□□□□ 0.24
CNN3-203ENST00000415017 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.24
CNN3-203ENST00000415017 CD2APQ9Y5K6 639 aa16.52■□□□□ 0.24
CNN3-203ENST00000415017 NPHP1O15259 732 aa16.51■□□□□ 0.23
CNN3-203ENST00000415017 NPR1P16066 1061 aa16.51■□□□□ 0.23
CNN3-203ENST00000415017 TGFB2P61812 414 aa16.51■□□□□ 0.23
CNN3-203ENST00000415017 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
CNN3-203ENST00000415017 CENPQQ7L2Z9 268 aaPredicted RBP16.51■□□□□ 0.23
CNN3-203ENST00000415017 KLHDC4Q8TBB5 520 aa16.51■□□□□ 0.23
CNN3-203ENST00000415017 PA2G4Q9UQ80 394 aaKnown RBP16.51■□□□□ 0.23
CNN3-203ENST00000415017 EYA2O00167 538 aa16.5■□□□□ 0.23
CNN3-203ENST00000415017 GRAPQ13588 217 aa16.5■□□□□ 0.23
CNN3-203ENST00000415017 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
CNN3-203ENST00000415017 GRAPLQ8TC17 118 aaPredicted RBP16.5■□□□□ 0.23
CNN3-203ENST00000415017 CELF1Q92879 486 aaKnown RBP16.5■□□□□ 0.23
CNN3-203ENST00000415017 MASTLQ96GX5 879 aa16.5■□□□□ 0.23
CNN3-203ENST00000415017 ZNF594Q96JF6 807 aaPredicted RBP16.5■□□□□ 0.23
CNN3-203ENST00000415017 CCDC85AQ96PX6 553 aaPredicted RBP16.5■□□□□ 0.23
CNN3-203ENST00000415017 CDC5LQ99459 802 aaKnown RBP16.5■□□□□ 0.23
CNN3-203ENST00000415017 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
CNN3-203ENST00000415017 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
CNN3-203ENST00000415017 SASH1O94885 1247 aa16.49■□□□□ 0.23
CNN3-203ENST00000415017 RPS8P62241 208 aaKnown RBP16.49■□□□□ 0.23
CNN3-203ENST00000415017 HSP90AB4PQ58FF6 505 aa16.49■□□□□ 0.23
CNN3-203ENST00000415017 DDX46Q7L014 1031 aaKnown RBP16.49■□□□□ 0.23
CNN3-203ENST00000415017 ARAP2Q8WZ64 1704 aa16.49■□□□□ 0.23
CNN3-203ENST00000415017 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
CNN3-203ENST00000415017 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
CNN3-203ENST00000415017 SNED1Q8TER0 1413 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 ARFGEF1Q9Y6D6 1849 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 H0YIN7 160 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 SURF6O75683 361 aaKnown RBP16.48■□□□□ 0.23
CNN3-203ENST00000415017 BBOX1O75936 387 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 IL15P40933 162 aaPredicted RBP16.48■□□□□ 0.23
CNN3-203ENST00000415017 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 C2CD5Q86YS7 1000 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 RPGRQ92834 1020 aaKnown RBP16.48■□□□□ 0.23
CNN3-203ENST00000415017 EXOC6BQ9Y2D4 811 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 CHMP3Q9Y3E7 222 aa16.48■□□□□ 0.23
CNN3-203ENST00000415017 ALDH1B1P30837 517 aa16.47■□□□□ 0.23
CNN3-203ENST00000415017 LDHAL6AQ6ZMR3 332 aa16.47■□□□□ 0.23
CNN3-203ENST00000415017 TMC4Q7Z404 712 aa16.47■□□□□ 0.23
CNN3-203ENST00000415017 ANKRD18AQ8IVF6 992 aa16.47■□□□□ 0.23
CNN3-203ENST00000415017 C7orf43Q8WVR3 580 aa16.47■□□□□ 0.23
CNN3-203ENST00000415017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.47■□□□□ 0.23
CNN3-203ENST00000415017 CHRNA5P30532 468 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms