RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 TLR1Q15399 786 aa11.93□□□□□ -0.5
TRA2B-204ENST00000414862 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRA2B-204ENST00000414862 HINFPQ9BQA5 517 aa11.93□□□□□ -0.5
TRA2B-204ENST00000414862 TBX22Q9Y458 520 aa11.93□□□□□ -0.5
TRA2B-204ENST00000414862 PIK3R4Q99570 1358 aa11.92□□□□□ -0.5
TRA2B-204ENST00000414862 LCE2BO14633 110 aa11.92□□□□□ -0.5
TRA2B-204ENST00000414862 GPC1P35052 558 aa11.92□□□□□ -0.5
TRA2B-204ENST00000414862 RNF144AP50876 292 aaPredicted RBP11.92□□□□□ -0.5
TRA2B-204ENST00000414862 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
TRA2B-204ENST00000414862 CHD2O14647 1828 aaKnown RBP11.92□□□□□ -0.5
TRA2B-204ENST00000414862 RGS12O14924 1447 aa11.92□□□□□ -0.5
TRA2B-204ENST00000414862 DCCP43146 1447 aa11.92□□□□□ -0.5
TRA2B-204ENST00000414862 A6NJY4 79 aa11.91□□□□□ -0.5
TRA2B-204ENST00000414862 FOXD4L5Q5VV16 416 aaPredicted RBP11.91□□□□□ -0.5
TRA2B-204ENST00000414862 BRINP3Q76B58 766 aa11.91□□□□□ -0.5
TRA2B-204ENST00000414862 ASXL1Q8IXJ9 1541 aa11.91□□□□□ -0.5
TRA2B-204ENST00000414862 SOS2Q07890 1332 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-204ENST00000414862 TTLL8A6PVC2 850 aa11.9□□□□□ -0.5
TRA2B-204ENST00000414862 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
TRA2B-204ENST00000414862 ZSCAN10Q96SZ4 725 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-204ENST00000414862 FHDC1Q9C0D6 1143 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-204ENST00000414862 GRIP2Q9C0E4 1043 aa11.9□□□□□ -0.5
TRA2B-204ENST00000414862 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.9□□□□□ -0.5
TRA2B-204ENST00000414862 TRPM2O94759 1503 aa11.9□□□□□ -0.5
TRA2B-204ENST00000414862 ADAMTS13Q76LX8 1427 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 SETD5Q9C0A6 1442 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 TMEM88BA6NKF7 163 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 EPHA4P54764 986 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 RBM6P78332 1123 aaKnown RBP11.89□□□□□ -0.51
TRA2B-204ENST00000414862 MTFR1Q15390 333 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 SWI5Q1ZZU3 235 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 C8orf37Q96NL8 207 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 GCC2Q8IWJ2 1684 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 TMEM131LA2VDJ0 1609 aa11.89□□□□□ -0.51
TRA2B-204ENST00000414862 CARNS1A5YM72 827 aa11.88□□□□□ -0.51
TRA2B-204ENST00000414862 FIGNL2A6NMB9 653 aa11.88□□□□□ -0.51
TRA2B-204ENST00000414862 LGR5O75473 907 aa11.88□□□□□ -0.51
TRA2B-204ENST00000414862 RNF217Q8TC41 542 aa11.88□□□□□ -0.51
TRA2B-204ENST00000414862 SENP2Q9HC62 589 aa11.88□□□□□ -0.51
TRA2B-204ENST00000414862 ATAD2Q6PL18 1390 aa11.88□□□□□ -0.51
TRA2B-204ENST00000414862 ADGRL2O95490 1459 aa11.88□□□□□ -0.51
TRA2B-204ENST00000414862 ANKRD50Q9ULJ7 1429 aa11.87□□□□□ -0.51
TRA2B-204ENST00000414862 CDK2AP1O14519 115 aa11.87□□□□□ -0.51
TRA2B-204ENST00000414862 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
TRA2B-204ENST00000414862 PDE4CQ08493 712 aa11.87□□□□□ -0.51
TRA2B-204ENST00000414862 TMEM214Q6NUQ4 689 aaKnown RBP11.87□□□□□ -0.51
TRA2B-204ENST00000414862 SCHIP1Q9P0W5 487 aaPredicted RBP11.87□□□□□ -0.51
TRA2B-204ENST00000414862 GMPR2Q9P2T1 348 aaKnown RBP11.87□□□□□ -0.51
TRA2B-204ENST00000414862 PRICKLE2Q7Z3G6 844 aa11.86□□□□□ -0.51
TRA2B-204ENST00000414862 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
TRA2B-204ENST00000414862 LRRC59Q96AG4 307 aaKnown RBP11.86□□□□□ -0.51
TRA2B-204ENST00000414862 NGLY1Q96IV0 654 aa11.86□□□□□ -0.51
TRA2B-204ENST00000414862 EP400Q96L91 3159 aa11.86□□□□□ -0.51
TRA2B-204ENST00000414862 LYSMD3Q7Z3D4 306 aa11.85□□□□□ -0.51
TRA2B-204ENST00000414862 KIFC2Q96AC6 838 aa11.85□□□□□ -0.51
TRA2B-204ENST00000414862 TSPAN10Q9H1Z9 355 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-204ENST00000414862 QTRT2Q9H974 415 aaKnown RBP11.85□□□□□ -0.51
TRA2B-204ENST00000414862 AMOTL2Q9Y2J4 779 aa11.85□□□□□ -0.51
TRA2B-204ENST00000414862 MST1RQ04912 1400 aa11.85□□□□□ -0.51
TRA2B-204ENST00000414862 PNPLA6Q8IY17 1366 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 MAN1A2O60476 641 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 FOXK2Q01167 660 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 TBCELQ5QJ74 424 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 SLC9A9Q8IVB4 645 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 CLP1Q92989 425 aaKnown RBP11.84□□□□□ -0.51
TRA2B-204ENST00000414862 TRIM47Q96LD4 638 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 DNMT3LQ9UJW3 386 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 IQSEC3Q9UPP2 1182 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-204ENST00000414862 USP3Q9Y6I4 520 aa11.84□□□□□ -0.51
TRA2B-204ENST00000414862 MYO5BQ9ULV0 1848 aa11.83□□□□□ -0.51
TRA2B-204ENST00000414862 NHSL1Q5SYE7 1610 aa11.83□□□□□ -0.52
TRA2B-204ENST00000414862 PRMT3O60678 531 aa11.83□□□□□ -0.52
TRA2B-204ENST00000414862 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
TRA2B-204ENST00000414862 HOMEZQ8IX15 550 aa11.83□□□□□ -0.52
TRA2B-204ENST00000414862 NBPF15Q8N660 670 aa11.83□□□□□ -0.52
TRA2B-204ENST00000414862 POU4F2Q12837 409 aa11.82□□□□□ -0.52
TRA2B-204ENST00000414862 RHBDD1Q8TEB9 315 aa11.82□□□□□ -0.52
TRA2B-204ENST00000414862 SCG3Q8WXD2 468 aaKnown RBP11.82□□□□□ -0.52
TRA2B-204ENST00000414862 PRIMPOLQ96LW4 560 aa11.82□□□□□ -0.52
TRA2B-204ENST00000414862 PTPRUQ92729 1446 aa11.82□□□□□ -0.52
TRA2B-204ENST00000414862 UNC13BO14795 1591 aa11.81□□□□□ -0.52
TRA2B-204ENST00000414862 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
TRA2B-204ENST00000414862 SOBPA7XYQ1 873 aa11.81□□□□□ -0.52
TRA2B-204ENST00000414862 SPATA31C2B4DYI2 1134 aa11.81□□□□□ -0.52
TRA2B-204ENST00000414862 ADAMTS2O95450 1211 aa11.81□□□□□ -0.52
TRA2B-204ENST00000414862 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.521e-7■■■■■ 32.6
TRA2B-204ENST00000414862 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
TRA2B-204ENST00000414862 XRN1Q8IZH2 1706 aaKnown RBP11.8□□□□□ -0.52
TRA2B-204ENST00000414862 C11orf95C9JLR9 678 aaPredicted RBP11.8□□□□□ -0.52
TRA2B-204ENST00000414862 C21orf2O43822 256 aa11.8□□□□□ -0.52
TRA2B-204ENST00000414862 WEE1P30291 646 aa11.8□□□□□ -0.52
TRA2B-204ENST00000414862 GAS2L2Q8NHY3 880 aa11.8□□□□□ -0.52
TRA2B-204ENST00000414862 CABP1Q9NZU7 370 aa11.8□□□□□ -0.52
TRA2B-204ENST00000414862 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 PPP1R12BO60237 982 aaPredicted RBP11.79□□□□□ -0.52
TRA2B-204ENST00000414862 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
TRA2B-204ENST00000414862 RHOQP17081 205 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 IGFBP4P22692 258 aa11.79□□□□□ -0.52
TRA2B-204ENST00000414862 ATP2B4P23634 1241 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms