RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 GPR162Q16538 588 aa13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 CCDC152Q4G0S7 254 aa13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 USP44Q9H0E7 712 aa13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 KIF13BQ9NQT8 1826 aa13.11□□□□□ -0.31
HLA-DMB-257ENST00000414017 COL11A2P13942 1736 aaPredicted RBP13.11□□□□□ -0.31
HLA-DMB-257ENST00000414017 DDX60Q8IY21 1712 aaKnown RBP13.11□□□□□ -0.31
HLA-DMB-257ENST00000414017 KCNA3P22001 575 aa13.11□□□□□ -0.31
HLA-DMB-257ENST00000414017 TTLL6Q8N841 843 aa13.11□□□□□ -0.31
HLA-DMB-257ENST00000414017 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 LMBR1LQ6UX01 489 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 CNKSR1Q969H4 720 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 BICC1Q9H694 974 aaKnown RBP13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 GREM2Q9H772 168 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 SEC31BQ9NQW1 1179 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 LRRFIP2Q9Y608 721 aaKnown RBP13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 RIC1Q4ADV7 1423 aa13.1□□□□□ -0.31
HLA-DMB-257ENST00000414017 KLRG2A4D1S0 409 aaPredicted RBP13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 GNAI3P08754 354 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 ALDH1B1P30837 517 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 MVPQ14764 893 aaKnown RBP13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 SF3B3Q15393 1217 aaKnown RBP13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 CRY2Q49AN0 593 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 PRPF40BQ6NWY9 871 aaKnown RBP13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 TTLL11Q8NHH1 800 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 KIAA1551Q9HCM1 1747 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 LAMB2P55268 1798 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 UTYO14607 1347 aa13.09□□□□□ -0.31
HLA-DMB-257ENST00000414017 CACNA1SQ13698 1873 aa13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 PPEF1O14829 653 aaPredicted RBP13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 C21orf2O43822 256 aa13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 IRX6P78412 446 aaPredicted RBP13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 FOXO4P98177 505 aa13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 PDE3AQ14432 1141 aa13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 CELF1Q92879 486 aaKnown RBP13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 PLA2G12BQ9BX93 195 aa13.08□□□□□ -0.32
HLA-DMB-257ENST00000414017 GOLGB1Q14789 3259 aaKnown RBP13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 GNAI2P04899 355 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 ITGA6P23229 1130 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 GRAPQ13588 217 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 OLFM4Q6UX06 510 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 GRAPLQ8TC17 118 aaPredicted RBP13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 KAZALD1Q96I82 304 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 CRAMP1Q96RY5 1269 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 TMX4Q9H1E5 349 aaPredicted RBP13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 HDAC5Q9UQL6 1122 aa13.07□□□□□ -0.32
HLA-DMB-257ENST00000414017 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 HOXA10P31260 410 aaPredicted RBP13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 IFIT5Q13325 482 aaKnown RBP13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 ARHGAP27Q6ZUM4 889 aa13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 SLC51AQ86UW1 340 aa13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 ANKRD18AQ8IVF6 992 aa13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 CRBNQ96SW2 442 aa13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 CDC5LQ99459 802 aaKnown RBP13.06□□□□□ -0.32
HLA-DMB-257ENST00000414017 MYH3P11055 1940 aa13.05□□□□□ -0.32
HLA-DMB-257ENST00000414017 DLEC1Q9Y238 1755 aa13.05□□□□□ -0.32
HLA-DMB-257ENST00000414017 CSF1RP07333 972 aa13.05□□□□□ -0.32
HLA-DMB-257ENST00000414017 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
HLA-DMB-257ENST00000414017 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
HLA-DMB-257ENST00000414017 ZNF594Q96JF6 807 aaPredicted RBP13.05□□□□□ -0.32
HLA-DMB-257ENST00000414017 TAF1P21675 1872 aa13.05□□□□□ -0.32
HLA-DMB-257ENST00000414017 SLX4Q8IY92 1834 aa13.04□□□□□ -0.32
HLA-DMB-257ENST00000414017 BBOX1O75936 387 aa13.04□□□□□ -0.32
HLA-DMB-257ENST00000414017 MPHOSPH8Q99549 860 aa13.04□□□□□ -0.32
HLA-DMB-257ENST00000414017 CCDC93Q567U6 631 aa13.03□□□□□ -0.32
HLA-DMB-257ENST00000414017 KLHDC4Q8TBB5 520 aa13.03□□□□□ -0.32
HLA-DMB-257ENST00000414017 CHMP4BQ9H444 224 aaKnown RBP13.03□□□□□ -0.32
HLA-DMB-257ENST00000414017 CNNM1Q9NRU3 951 aa13.03□□□□□ -0.32
HLA-DMB-257ENST00000414017 COL4A1P02462 1669 aa13.02□□□□□ -0.32
HLA-DMB-257ENST00000414017 BRCA1P38398 1863 aaKnown RBP13.02□□□□□ -0.32
HLA-DMB-257ENST00000414017 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
HLA-DMB-257ENST00000414017 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
HLA-DMB-257ENST00000414017 RASSF7Q02833 373 aa13.02□□□□□ -0.33
HLA-DMB-257ENST00000414017 RABL6Q3YEC7 729 aaPredicted RBP13.02□□□□□ -0.33
HLA-DMB-257ENST00000414017 SIL1Q9H173 461 aa13.02□□□□□ -0.33
HLA-DMB-257ENST00000414017 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.33
HLA-DMB-257ENST00000414017 SPEF2Q9C093 1822 aa13.02□□□□□ -0.33
HLA-DMB-257ENST00000414017 SOGA3Q5TF21 947 aa13.01□□□□□ -0.33
HLA-DMB-257ENST00000414017 LDHAL6AQ6ZMR3 332 aa13.01□□□□□ -0.33
HLA-DMB-257ENST00000414017 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
HLA-DMB-257ENST00000414017 ANKIB1Q9P2G1 1089 aa13.01□□□□□ -0.33
HLA-DMB-257ENST00000414017 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
HLA-DMB-257ENST00000414017 PA2G4Q9UQ80 394 aaKnown RBP13.01□□□□□ -0.33
HLA-DMB-257ENST00000414017 RTL9Q8NET4 1388 aa13.01□□□□□ -0.33
HLA-DMB-257ENST00000414017 UTRNP46939 3433 aa13□□□□□ -0.33
HLA-DMB-257ENST00000414017 PNMA6EA0A0J9YXQ4 647 aa13□□□□□ -0.33
HLA-DMB-257ENST00000414017 DPP8Q6V1X1 898 aaPredicted RBP13□□□□□ -0.33
HLA-DMB-257ENST00000414017 TMC4Q7Z404 712 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms