RNA–Protein interactions for RNA: ENST00000414009.1

HPS1-205, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-205ENST00000414009 BCS1LQ9Y276 419 aa18.67■□□□□ 0.58
HPS1-205ENST00000414009 ABCC12Q96J65 1359 aa18.67■□□□□ 0.58
HPS1-205ENST00000414009 RIC1Q4ADV7 1423 aa18.66■□□□□ 0.58
HPS1-205ENST00000414009 PCCAP05165 728 aaPredicted RBP18.66■□□□□ 0.58
HPS1-205ENST00000414009 IGKV5-2P06315 115 aa18.66■□□□□ 0.58
HPS1-205ENST00000414009 NPR1P16066 1061 aa18.66■□□□□ 0.58
HPS1-205ENST00000414009 SLC10A5Q5PT55 438 aa18.66■□□□□ 0.58
HPS1-205ENST00000414009 TTLL6Q8N841 843 aa18.66■□□□□ 0.58
HPS1-205ENST00000414009 FRAT1Q92837 279 aaPredicted RBP18.66■□□□□ 0.58
HPS1-205ENST00000414009 MASTLQ96GX5 879 aa18.66■□□□□ 0.58
HPS1-205ENST00000414009 SRCIN1Q9C0H9 1055 aa18.66■□□□□ 0.58
HPS1-205ENST00000414009 IRS4O14654 1257 aaPredicted RBP18.65■□□□□ 0.58
HPS1-205ENST00000414009 GRIN3BO60391 1043 aa18.65■□□□□ 0.58
HPS1-205ENST00000414009 SRGNP10124 158 aa18.65■□□□□ 0.58
HPS1-205ENST00000414009 HCLS1P14317 486 aaPredicted RBP18.65■□□□□ 0.58
HPS1-205ENST00000414009 STYK1Q6J9G0 422 aa18.65■□□□□ 0.58
HPS1-205ENST00000414009 CNKSR1Q969H4 720 aa18.65■□□□□ 0.58
HPS1-205ENST00000414009 KIAA1551Q9HCM1 1747 aa18.64■□□□□ 0.57
HPS1-205ENST00000414009 ALDH1L1O75891 902 aa18.64■□□□□ 0.57
HPS1-205ENST00000414009 KCNA3P22001 575 aa18.64■□□□□ 0.57
HPS1-205ENST00000414009 ALDH1B1P30837 517 aa18.64■□□□□ 0.57
HPS1-205ENST00000414009 GCKRQ14397 625 aa18.64■□□□□ 0.57
HPS1-205ENST00000414009 BEND3Q5T5X7 828 aa18.64■□□□□ 0.57
HPS1-205ENST00000414009 ASTLQ6HA08 431 aaPredicted RBP18.64■□□□□ 0.57
HPS1-205ENST00000414009 KLRG2A4D1S0 409 aaPredicted RBP18.63■□□□□ 0.57
HPS1-205ENST00000414009 BCAR3O75815 825 aa18.63■□□□□ 0.57
HPS1-205ENST00000414009 SYNE4Q8N205 404 aa18.63■□□□□ 0.57
HPS1-205ENST00000414009 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
HPS1-205ENST00000414009 RBM17Q96I25 401 aaKnown RBP18.63■□□□□ 0.57
HPS1-205ENST00000414009 C9orf78Q9NZ63 289 aaPredicted RBP18.63■□□□□ 0.57
HPS1-205ENST00000414009 DLEC1Q9Y238 1755 aa18.63■□□□□ 0.57
HPS1-205ENST00000414009 MAP3K13O43283 966 aa18.62■□□□□ 0.57
HPS1-205ENST00000414009 UBE3BQ7Z3V4 1068 aa18.62■□□□□ 0.57
HPS1-205ENST00000414009 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
HPS1-205ENST00000414009 PDE8AO60658 829 aa18.61■□□□□ 0.57
HPS1-205ENST00000414009 CCT4P50991 539 aaKnown RBP18.61■□□□□ 0.57
HPS1-205ENST00000414009 CRY2Q49AN0 593 aa18.61■□□□□ 0.57
HPS1-205ENST00000414009 ZKSCAN2Q63HK3 967 aa18.61■□□□□ 0.57
HPS1-205ENST00000414009 JARID2Q92833 1246 aaPredicted RBP18.61■□□□□ 0.57
HPS1-205ENST00000414009 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
HPS1-205ENST00000414009 COL11A2P13942 1736 aaPredicted RBP18.6■□□□□ 0.57
HPS1-205ENST00000414009 TNRC6CQ9HCJ0 1690 aaKnown RBP18.6■□□□□ 0.57
HPS1-205ENST00000414009 ATMINO43313 823 aaPredicted RBP18.6■□□□□ 0.57
HPS1-205ENST00000414009 DDX46Q7L014 1031 aaKnown RBP18.6■□□□□ 0.57
HPS1-205ENST00000414009 TMX4Q9H1E5 349 aaPredicted RBP18.6■□□□□ 0.57
HPS1-205ENST00000414009 RCAN3Q9UKA8 241 aa18.6■□□□□ 0.57
HPS1-205ENST00000414009 H7C1W4 665 aa18.59■□□□□ 0.57
HPS1-205ENST00000414009 GRM8O00222 908 aa18.59■□□□□ 0.57
HPS1-205ENST00000414009 YBX3P16989 372 aaKnown RBP eCLIP18.59■□□□□ 0.571e-7■■□□□ 14.5
HPS1-205ENST00000414009 VASPP50552 380 aaPredicted RBP18.59■□□□□ 0.57
HPS1-205ENST00000414009 ATF7IPQ6VMQ6 1270 aa18.59■□□□□ 0.57
HPS1-205ENST00000414009 DDX60Q8IY21 1712 aaKnown RBP18.58■□□□□ 0.57
HPS1-205ENST00000414009 CCDC152Q4G0S7 254 aa18.58■□□□□ 0.56
HPS1-205ENST00000414009 SOGA3Q5TF21 947 aa18.58■□□□□ 0.56
HPS1-205ENST00000414009 PRPF40BQ6NWY9 871 aaKnown RBP18.58■□□□□ 0.56
HPS1-205ENST00000414009 CRAMP1Q96RY5 1269 aa18.58■□□□□ 0.56
HPS1-205ENST00000414009 LAMB2P55268 1798 aa18.58■□□□□ 0.56
HPS1-205ENST00000414009 CACNA1SQ13698 1873 aa18.57■□□□□ 0.56
HPS1-205ENST00000414009 HOXA10P31260 410 aaPredicted RBP18.57■□□□□ 0.56
HPS1-205ENST00000414009 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
HPS1-205ENST00000414009 C3orf67Q6ZVT6 689 aa18.57■□□□□ 0.56
HPS1-205ENST00000414009 FTSJ3Q8IY81 847 aaKnown RBP18.57■□□□□ 0.56
HPS1-205ENST00000414009 TRPC6Q9Y210 931 aa18.57■□□□□ 0.56
HPS1-205ENST00000414009 ARFGEF1Q9Y6D6 1849 aa18.56■□□□□ 0.56
HPS1-205ENST00000414009 MS4A1P11836 297 aa18.56■□□□□ 0.56
HPS1-205ENST00000414009 CTSWP56202 376 aa18.56■□□□□ 0.56
HPS1-205ENST00000414009 ARHGAP27Q6ZUM4 889 aa18.56■□□□□ 0.56
HPS1-205ENST00000414009 C21orf2O43822 256 aa18.55■□□□□ 0.56
HPS1-205ENST00000414009 TRIM27P14373 513 aa18.55■□□□□ 0.56
HPS1-205ENST00000414009 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.55■□□□□ 0.56
HPS1-205ENST00000414009 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
HPS1-205ENST00000414009 HDAC5Q9UQL6 1122 aa18.55■□□□□ 0.56
HPS1-205ENST00000414009 MYH3P11055 1940 aa18.55■□□□□ 0.56
HPS1-205ENST00000414009 PPEF1O14829 653 aaPredicted RBP18.54■□□□□ 0.56
HPS1-205ENST00000414009 BBOX1O75936 387 aa18.54■□□□□ 0.56
HPS1-205ENST00000414009 PLA2G12BQ9BX93 195 aa18.54■□□□□ 0.56
HPS1-205ENST00000414009 ABCC4O15439 1325 aa18.53■□□□□ 0.56
HPS1-205ENST00000414009 GRAPQ13588 217 aa18.53■□□□□ 0.56
HPS1-205ENST00000414009 TMC4Q7Z404 712 aa18.53■□□□□ 0.56
HPS1-205ENST00000414009 DZIP1LQ8IYY4 767 aaKnown RBP18.53■□□□□ 0.56
HPS1-205ENST00000414009 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
HPS1-205ENST00000414009 FAM212AQ96EL1 285 aa18.53■□□□□ 0.56
HPS1-205ENST00000414009 CCDC85AQ96PX6 553 aaPredicted RBP18.53■□□□□ 0.56
HPS1-205ENST00000414009 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
HPS1-205ENST00000414009 SLX4Q8IY92 1834 aa18.53■□□□□ 0.56
HPS1-205ENST00000414009 CASP7P55210 303 aa18.52■□□□□ 0.56
HPS1-205ENST00000414009 CCDC93Q567U6 631 aa18.52■□□□□ 0.56
HPS1-205ENST00000414009 INTS3Q68E01 1043 aaKnown RBP18.52■□□□□ 0.56
HPS1-205ENST00000414009 CC2D2BQ6DHV5 1058 aa18.52■□□□□ 0.56
HPS1-205ENST00000414009 TTLL11Q8NHH1 800 aa18.52■□□□□ 0.56
HPS1-205ENST00000414009 CDC5LQ99459 802 aaKnown RBP18.52■□□□□ 0.56
HPS1-205ENST00000414009 UBTFL1P0CB47 393 aaPredicted RBP18.51■□□□□ 0.55
HPS1-205ENST00000414009 GRIPAP1Q4V328 841 aa18.51■□□□□ 0.55
HPS1-205ENST00000414009 UTYO14607 1347 aa18.5■□□□□ 0.55
HPS1-205ENST00000414009 NBPF7P0C2Y1 421 aaPredicted RBP18.5■□□□□ 0.55
HPS1-205ENST00000414009 ANKRD18AQ8IVF6 992 aa18.5■□□□□ 0.55
HPS1-205ENST00000414009 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
HPS1-205ENST00000414009 USP44Q9H0E7 712 aa18.5■□□□□ 0.55
HPS1-205ENST00000414009 POTEB2H3BUK9 544 aa18.49■□□□□ 0.55
HPS1-205ENST00000414009 GNAI3P08754 354 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms