RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 TM6SF1Q9BZW5 370 aa17.25■□□□□ 0.35
SEMA3F-202ENST00000413852 CLSTN2Q9H4D0 955 aa17.25■□□□□ 0.35
SEMA3F-202ENST00000413852 CTIFO43310 598 aaKnown RBP17.24■□□□□ 0.35
SEMA3F-202ENST00000413852 PLA2G4DQ86XP0 818 aa17.24■□□□□ 0.35
SEMA3F-202ENST00000413852 HSP90AB4PQ58FF6 505 aa17.24■□□□□ 0.35
SEMA3F-202ENST00000413852 Q6ZUG5 572 aa17.24■□□□□ 0.35
SEMA3F-202ENST00000413852 GOLPH3LQ9H4A5 285 aa17.24■□□□□ 0.35
SEMA3F-202ENST00000413852 NCOA5Q9HCD5 579 aaKnown RBP17.24■□□□□ 0.35
SEMA3F-202ENST00000413852 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 USP42Q9H9J4 1324 aaKnown RBP17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 LMOD2Q6P5Q4 547 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 ST7Q9NRC1 585 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 FMN2Q9NZ56 1722 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 H3BQV1 296 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 KCNB2Q92953 911 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
SEMA3F-202ENST00000413852 EPB41L2O43491 1005 aaKnown RBP17.22■□□□□ 0.35
SEMA3F-202ENST00000413852 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
SEMA3F-202ENST00000413852 DDX46Q7L014 1031 aaKnown RBP17.22■□□□□ 0.35
SEMA3F-202ENST00000413852 RAB11FIP4Q86YS3 637 aa17.22■□□□□ 0.35
SEMA3F-202ENST00000413852 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
SEMA3F-202ENST00000413852 KCNA6P17658 529 aa17.21■□□□□ 0.35
SEMA3F-202ENST00000413852 OTUD7BQ6GQQ9 843 aa17.21■□□□□ 0.35
SEMA3F-202ENST00000413852 TAF5LO75529 589 aa17.21■□□□□ 0.34
SEMA3F-202ENST00000413852 FGD1P98174 961 aa17.21■□□□□ 0.34
SEMA3F-202ENST00000413852 RESTQ13127 1097 aa17.21■□□□□ 0.34
SEMA3F-202ENST00000413852 GRM8O00222 908 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 PSMA5P28066 241 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 SCRN1Q12765 414 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 CCDC112Q8NEF3 446 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 SCAND2PQ9GZW5 306 aaPredicted RBP17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 DBF4Q9UBU7 674 aaPredicted RBP17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 PIK3C2AO00443 1686 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 ISM2Q6H9L7 571 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 KSR2Q6VAB6 950 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 LRRN4CLQ8ND94 238 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 ZNF215Q9UL58 517 aaPredicted RBP17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 NPHP3Q7Z494 1330 aa17.2■□□□□ 0.34
SEMA3F-202ENST00000413852 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 IGKV5-2P06315 115 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 UTP14CQ5TAP6 766 aaKnown RBP17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 CEP135Q66GS9 1140 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 ZNF771Q7L3S4 317 aaPredicted RBP17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 TDRD7Q8NHU6 1098 aaKnown RBP17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 CTNNA3Q9UI47 895 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 STOX1Q6ZVD7 989 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 GPHNQ9NQX3 736 aaPredicted RBP17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 ZBTB22O15209 634 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 ZBTB9Q96C00 473 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 FMNL2Q96PY5 1086 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 GJB4Q9NTQ9 266 aa17.19■□□□□ 0.34
SEMA3F-202ENST00000413852 CYP21A2P08686 494 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 IQCB1Q15051 598 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 LRRC8AQ8IWT6 810 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 DDX19AQ9NUU7 478 aaKnown RBP17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 ELP1O95163 1332 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 GOLGA6L19H0YKK7 550 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 TPM3P06753 285 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 SKILP12757 684 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 PDCP20941 246 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 TFCP2Q12800 502 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 NEK1Q96PY6 1258 aa17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 DBNLQ9UJU6 430 aaKnown RBP17.18■□□□□ 0.34
SEMA3F-202ENST00000413852 MTX1Q13505 466 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 GTF3C6Q969F1 213 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 USP28Q96RU2 1077 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 ATP5J2-PTCD1G3V325 749 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 BIN1O00499 593 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 PTCD1O75127 700 aaKnown RBP17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 MYD88Q99836 296 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 AOPEPQ8N6M6 819 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
SEMA3F-202ENST00000413852 CCDC69A6NI79 296 aa17.16■□□□□ 0.34
SEMA3F-202ENST00000413852 ELF2Q15723 593 aa17.16■□□□□ 0.34
SEMA3F-202ENST00000413852 RNMTO43148 476 aaKnown RBP17.16■□□□□ 0.34
SEMA3F-202ENST00000413852 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
SEMA3F-202ENST00000413852 KMT5BQ4FZB7 885 aa17.16■□□□□ 0.34
SEMA3F-202ENST00000413852 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
SEMA3F-202ENST00000413852 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 EID1Q9Y6B2 187 aa17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 PXDNQ92626 1479 aa17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 BECN2A8MW95 431 aa17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 ERC1Q8IUD2 1116 aa17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 A0A1B0GVL5 298 aa17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 RBM43Q6ZSC3 357 aaKnown RBP17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 GTPBP4Q9BZE4 634 aaKnown RBP17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
SEMA3F-202ENST00000413852 DHX40Q8IX18 779 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms