RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 XAGE3Q8WTP9 111 aa22.55■■□□□ 1.2
TNFRSF8-202ENST00000413146 TPM3P06753 285 aa22.55■■□□□ 1.2
TNFRSF8-202ENST00000413146 KRT32Q14532 448 aa22.55■■□□□ 1.2
TNFRSF8-202ENST00000413146 TAF5LO75529 589 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 LIG1P18858 919 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 HMGN5P82970 282 aaKnown RBP22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 STK3Q13188 491 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 FAM200AQ8TCP9 573 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 METTL22Q9BUU2 404 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 SPTLC3Q9NUV7 552 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 TRPM3Q9HCF6 1732 aaPredicted RBP22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 GOLGA6L6A8MZA4 724 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 AP5Z1O43299 807 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 EPHA10Q5JZY3 1008 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 COPS6Q7L5N1 327 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 SPATA32Q96LK8 384 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 SLC52A2Q9HAB3 445 aa22.54■■□□□ 1.2
TNFRSF8-202ENST00000413146 C17orf53Q8N3J3 647 aaPredicted RBP22.53■■□□□ 1.2
TNFRSF8-202ENST00000413146 RAPGEF4Q8WZA2 1011 aa22.53■■□□□ 1.2
TNFRSF8-202ENST00000413146 EDC3Q96F86 508 aaKnown RBP22.53■■□□□ 1.2
TNFRSF8-202ENST00000413146 ATP5JP18859 108 aa22.53■■□□□ 1.2
TNFRSF8-202ENST00000413146 TNMDQ9H2S6 317 aa22.53■■□□□ 1.2
TNFRSF8-202ENST00000413146 COPRSQ9NQ92 184 aa22.53■■□□□ 1.2
TNFRSF8-202ENST00000413146 ERBB3P21860 1342 aa22.52■■□□□ 1.2
TNFRSF8-202ENST00000413146 NPHP3Q7Z494 1330 aa22.52■■□□□ 1.2
TNFRSF8-202ENST00000413146 AFDNP55196 1824 aaKnown RBP22.52■■□□□ 1.2
TNFRSF8-202ENST00000413146 TYRO3Q06418 890 aa22.52■■□□□ 1.2
TNFRSF8-202ENST00000413146 CAMK4Q16566 473 aa22.52■■□□□ 1.2
TNFRSF8-202ENST00000413146 USPL1Q5W0Q7 1092 aa22.52■■□□□ 1.2
TNFRSF8-202ENST00000413146 DBNLQ9UJU6 430 aaKnown RBP22.52■■□□□ 1.19
TNFRSF8-202ENST00000413146 KDM6AO15550 1401 aaPredicted RBP22.51■■□□□ 1.19
TNFRSF8-202ENST00000413146 TNNI3KQ59H18 835 aa22.51■■□□□ 1.19
TNFRSF8-202ENST00000413146 DACT1Q9NYF0 836 aa22.51■■□□□ 1.19
TNFRSF8-202ENST00000413146 MRVI1Q9Y6F6 885 aa22.51■■□□□ 1.19
TNFRSF8-202ENST00000413146 FPGT-TNNI3KV9GXZ4 949 aa22.51■■□□□ 1.19
TNFRSF8-202ENST00000413146 RFX7Q2KHR2 1363 aa22.51■■□□□ 1.19
TNFRSF8-202ENST00000413146 SPC24Q8NBT2 197 aa22.5■■□□□ 1.19
TNFRSF8-202ENST00000413146 DDX19AQ9NUU7 478 aaKnown RBP22.5■■□□□ 1.19
TNFRSF8-202ENST00000413146 TFIP11Q9UBB9 837 aaKnown RBP22.5■■□□□ 1.19
TNFRSF8-202ENST00000413146 ANKRD13DQ6ZTN6 518 aa22.5■■□□□ 1.19
TNFRSF8-202ENST00000413146 LEO1Q8WVC0 666 aaPredicted RBP22.5■■□□□ 1.19
TNFRSF8-202ENST00000413146 NEK1Q96PY6 1258 aa22.5■■□□□ 1.19
TNFRSF8-202ENST00000413146 TFCP2Q12800 502 aa22.49■■□□□ 1.19
TNFRSF8-202ENST00000413146 NFATC2IPQ8NCF5 419 aa22.49■■□□□ 1.19
TNFRSF8-202ENST00000413146 GTF3C6Q969F1 213 aa22.49■■□□□ 1.19
TNFRSF8-202ENST00000413146 KRT28Q7Z3Y7 464 aa22.49■■□□□ 1.19
TNFRSF8-202ENST00000413146 U3KPZ7 1027 aaPredicted RBP22.49■■□□□ 1.19
TNFRSF8-202ENST00000413146 HSP90B1P14625 803 aaKnown RBP22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 PTPN12Q05209 780 aaKnown RBP22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 CKAP2LQ8IYA6 745 aa22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 KCNF1Q9H3M0 494 aa22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 COL15A1P39059 1388 aa22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 RFX5P48382 616 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 KIAA1524Q8TCG1 905 aa22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 ZNF496Q96IT1 587 aaPredicted RBP22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 DNAJC2Q99543 621 aaKnown RBP22.48■■□□□ 1.19
TNFRSF8-202ENST00000413146 JARID2Q92833 1246 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 NLRP2Q9NX02 1062 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 ZNF609O15014 1411 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 JAK2O60674 1132 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 PHKG2P15735 406 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 TATP17735 454 aaPredicted RBP22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 ZC3H6P61129 1189 aaKnown RBP22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 UBE3BQ7Z3V4 1068 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 LUZP1Q86V48 1076 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 BICD2Q8TD16 824 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 CLSTN2Q9H4D0 955 aa22.47■■□□□ 1.19
TNFRSF8-202ENST00000413146 ANO6Q4KMQ2 910 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 Q6ZUG5 572 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 TTC5Q8N0Z6 440 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 ARFGEF2Q9Y6D5 1785 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 H3BQV1 296 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 SNRPA1P09661 255 aaKnown RBP22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 GTF2F1P35269 517 aaKnown RBP eCLIP22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 IFFO2Q5TF58 517 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 BRF1Q92994 677 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 PYCARDQ9ULZ3 195 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 NDUFB9Q9Y6M9 179 aa22.46■■□□□ 1.19
TNFRSF8-202ENST00000413146 RABL6Q3YEC7 729 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF8-202ENST00000413146 MCMDC2Q4G0Z9 681 aa22.45■■□□□ 1.18
TNFRSF8-202ENST00000413146 CCDC129Q6ZRS4 1044 aa22.45■■□□□ 1.18
TNFRSF8-202ENST00000413146 ZMYND15Q9H091 742 aa22.45■■□□□ 1.18
TNFRSF8-202ENST00000413146 RBM43Q6ZSC3 357 aaKnown RBP22.45■■□□□ 1.18
TNFRSF8-202ENST00000413146 DBNDD2Q9BQY9 259 aa22.45■■□□□ 1.18
TNFRSF8-202ENST00000413146 CBX8Q9HC52 389 aa22.45■■□□□ 1.18
TNFRSF8-202ENST00000413146 RESTQ13127 1097 aa22.44■■□□□ 1.18
TNFRSF8-202ENST00000413146 HAUS7Q99871 368 aa22.44■■□□□ 1.18
TNFRSF8-202ENST00000413146 USP16Q9Y5T5 823 aa22.44■■□□□ 1.18
TNFRSF8-202ENST00000413146 KDM4FA0A1W2PPD8 638 aa22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 CYP21A2P08686 494 aa22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 PIP4K2AP48426 406 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 FGD1P98174 961 aa22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 LRP10Q7Z4F1 713 aa22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 IFNL2Q8IZJ0 200 aa22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 SEC62Q99442 399 aaKnown RBP22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 CHAF1AQ13111 956 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 ZSCAN16Q9H4T2 348 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF8-202ENST00000413146 A0A087WZG4 1122 aa22.42■■□□□ 1.18
TNFRSF8-202ENST00000413146 NR1I2O75469 434 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms