RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 EXOC1Q9NV70 894 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.4□□□□□ -1.06
PTPN3-203ENST00000412145 CCDC160A6NGH7 325 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 GTF2F1P35269 517 aaKnown RBP eCLIP8.4□□□□□ -1.06
PTPN3-203ENST00000412145 TRIM14Q14142 442 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 C16orf45Q96MC5 204 aaPredicted RBP8.4□□□□□ -1.06
PTPN3-203ENST00000412145 CACYBPQ9HB71 228 aaKnown RBP8.4□□□□□ -1.06
PTPN3-203ENST00000412145 MACROD2A1Z1Q3 448 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 HMOX1P09601 288 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 KRT13P13646 458 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 GSTO1P78417 241 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 CFAP58Q5T655 872 aa8.4□□□□□ -1.06
PTPN3-203ENST00000412145 MX1P20591 662 aa8.4□□□□□ -1.07
PTPN3-203ENST00000412145 POGZQ7Z3K3 1410 aa8.4□□□□□ -1.07
PTPN3-203ENST00000412145 ZC3H15Q8WU90 426 aaKnown RBP8.4□□□□□ -1.07
PTPN3-203ENST00000412145 NUF2Q9BZD4 464 aa8.4□□□□□ -1.07
PTPN3-203ENST00000412145 CABP4P57796 275 aa8.4□□□□□ -1.07
PTPN3-203ENST00000412145 SARNPP82979 210 aaKnown RBP8.4□□□□□ -1.07
PTPN3-203ENST00000412145 KLHL40Q2TBA0 621 aa8.4□□□□□ -1.07
PTPN3-203ENST00000412145 NKIRAS1Q9NYS0 192 aa8.4□□□□□ -1.07
PTPN3-203ENST00000412145 NKTRP30414 1462 aaKnown RBP8.39□□□□□ -1.07
PTPN3-203ENST00000412145 PTPRCP08575 1304 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 A0A1B0GUL7 405 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 VWA3BQ502W6 1294 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 SYNCQ9H7C4 482 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 HYPKQ9NX55 129 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 AKR1B10O60218 316 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 ZNF853P0CG23 659 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 MRC2Q9UBG0 1479 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 DDX54Q8TDD1 881 aaKnown RBP8.39□□□□□ -1.07
PTPN3-203ENST00000412145 CASKIN1Q8WXD9 1431 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 SLC4A2P04920 1241 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 NCBP1Q09161 790 aaKnown RBP8.39□□□□□ -1.07
PTPN3-203ENST00000412145 SRGAP3O43295 1099 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 BUB1BO60566 1050 aaPredicted RBP8.39□□□□□ -1.07
PTPN3-203ENST00000412145 TOM1L2Q6ZVM7 507 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 CNNM2Q9H8M5 875 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 ARHGAP5Q13017 1502 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 SLC5A1P13866 664 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 RILPL1Q5EBL4 403 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 KCNH5Q8NCM2 988 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 RGS22Q8NE09 1264 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 BRPF3Q9ULD4 1205 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 HDXQ7Z353 690 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 ZGPATQ8N5A5 531 aaKnown RBP8.39□□□□□ -1.07
PTPN3-203ENST00000412145 FAN1Q9Y2M0 1017 aa8.39□□□□□ -1.07
PTPN3-203ENST00000412145 CCDC117Q8IWD4 279 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 NOB1Q9ULX3 412 aaKnown RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 PSMA7O14818 248 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 BAG3O95817 575 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 LRSAM1Q6UWE0 723 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 GOLGA8QA0A0J9YX86 632 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 GOLGA8OA6NCC3 632 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 GOLGA8NF8WBI6 632 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 UBA7P41226 1012 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 CALCOCO2Q13137 446 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 FAM76AQ8TAV0 307 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 RASSF4Q9H2L5 321 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 Q9H521 79 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 PSMC4P43686 418 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 NOP2P46087 812 aaKnown RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 PPP2R5EQ16537 467 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 KLHL10Q6JEL2 608 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 CCDC26Q8TAB7 109 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 IPO4Q8TEX9 1081 aaKnown RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 EIF2AQ9BY44 585 aaKnown RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 MKNK2Q9HBH9 465 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 SLC52A1Q9NWF4 448 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 SYNJ2O15056 1496 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 CRACR2BQ8N4Y2 399 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 EVI5LQ96CN4 794 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 TEX13AQ9BXU3 409 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 SEPT14Q6ZU15 432 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 INTS8Q75QN2 995 aaKnown RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 SYCP3Q8IZU3 236 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 SUDS3Q9H7L9 328 aaPredicted RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 LUC7L3O95232 432 aaKnown RBP8.38□□□□□ -1.07
PTPN3-203ENST00000412145 PLCB1Q9NQ66 1216 aa8.38□□□□□ -1.07
PTPN3-203ENST00000412145 PPP2R1AP30153 589 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 PRKAR2BP31323 418 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 RBM5P52756 815 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPN3-203ENST00000412145 STK10O94804 968 aaKnown RBP8.37□□□□□ -1.07
PTPN3-203ENST00000412145 CCDC96Q2M329 555 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 CPLX4Q7Z7G2 160 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 GNG11P61952 73 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPN3-203ENST00000412145 CCDC114Q96M63 670 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 TSKSQ9UJT2 592 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 NCOA2Q15596 1464 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 HLA-DOAP06340 250 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 CFAP70Q5T0N1 1121 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 LGSNQ5TDP6 509 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 CNGA4Q8IV77 575 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 KRT23Q9C075 422 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 STK3Q13188 491 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 NEDD9Q14511 834 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 NUTM1Q86Y26 1132 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 FAM200AQ8TCP9 573 aa8.37□□□□□ -1.07
PTPN3-203ENST00000412145 ZSCAN29Q8IWY8 852 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms