RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 GNASQ5JWF2 1037 aa9.14□□□□□ -0.95
LSM5-203ENST00000409782 TSEN2Q8NCE0 465 aaKnown RBP9.14□□□□□ -0.95
LSM5-203ENST00000409782 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
LSM5-203ENST00000409782 HRH3Q9Y5N1 445 aa9.14□□□□□ -0.95
LSM5-203ENST00000409782 C3P01024 1663 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 FAM13AO94988 1023 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 SMTNP53814 917 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 FGD1P98174 961 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
LSM5-203ENST00000409782 SLC4A9Q96Q91 983 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
LSM5-203ENST00000409782 ANO2Q9NQ90 1003 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 ZNF358Q9NW07 568 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 TCOF1Q13428 1488 aaKnown RBP9.13□□□□□ -0.95
LSM5-203ENST00000409782 FGD6Q6ZV73 1430 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
LSM5-203ENST00000409782 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
LSM5-203ENST00000409782 SPATA31C2B4DYI2 1134 aa9.12□□□□□ -0.95
LSM5-203ENST00000409782 ZC3H6P61129 1189 aaKnown RBP9.12□□□□□ -0.95
LSM5-203ENST00000409782 POU4F2Q12837 409 aa9.12□□□□□ -0.95
LSM5-203ENST00000409782 EAPPQ56P03 285 aaPredicted RBP9.12□□□□□ -0.95
LSM5-203ENST00000409782 WDR44Q5JSH3 913 aa9.12□□□□□ -0.95
LSM5-203ENST00000409782 CITED4Q96RK1 184 aa9.12□□□□□ -0.95
LSM5-203ENST00000409782 CROCC2H7BZ55 1655 aa9.12□□□□□ -0.95
LSM5-203ENST00000409782 NPATQ14207 1427 aa9.12□□□□□ -0.95
LSM5-203ENST00000409782 A6NJY4 79 aa9.11□□□□□ -0.95
LSM5-203ENST00000409782 RHOQP17081 205 aa9.11□□□□□ -0.95
LSM5-203ENST00000409782 ITGAEP38570 1179 aa9.11□□□□□ -0.95
LSM5-203ENST00000409782 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
LSM5-203ENST00000409782 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
LSM5-203ENST00000409782 NPAS3Q8IXF0 933 aa9.11□□□□□ -0.95
LSM5-203ENST00000409782 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
LSM5-203ENST00000409782 SLC16A10Q8TF71 515 aa9.11□□□□□ -0.95
LSM5-203ENST00000409782 SREK1Q8WXA9 508 aaKnown RBP9.11□□□□□ -0.95
LSM5-203ENST00000409782 ZNF775Q96BV0 537 aaPredicted RBP9.11□□□□□ -0.95
LSM5-203ENST00000409782 EIF2AK4Q9P2K8 1649 aaKnown RBP9.11□□□□□ -0.95
LSM5-203ENST00000409782 UHRF1BP1Q6BDS2 1440 aa9.11□□□□□ -0.95
LSM5-203ENST00000409782 KDM5DQ9BY66 1539 aa9.1□□□□□ -0.95
LSM5-203ENST00000409782 DNMT1P26358 1616 aaKnown RBP9.1□□□□□ -0.95
LSM5-203ENST00000409782 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
LSM5-203ENST00000409782 TERTO14746 1132 aaKnown RBP9.1□□□□□ -0.95
LSM5-203ENST00000409782 TSPY4P0CV99 314 aa9.1□□□□□ -0.95
LSM5-203ENST00000409782 TSPY10P0CW01 314 aa9.1□□□□□ -0.95
LSM5-203ENST00000409782 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
LSM5-203ENST00000409782 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
LSM5-203ENST00000409782 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
LSM5-203ENST00000409782 SETD1BQ9UPS6 1966 aaKnown RBP9.1□□□□□ -0.95
LSM5-203ENST00000409782 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
LSM5-203ENST00000409782 MRPL58Q14197 206 aaKnown RBP9.09□□□□□ -0.95
LSM5-203ENST00000409782 MTFR1Q15390 333 aa9.09□□□□□ -0.95
LSM5-203ENST00000409782 STAG2Q8N3U4 1231 aa9.09□□□□□ -0.95
LSM5-203ENST00000409782 CCDC155Q8N6L0 562 aa9.09□□□□□ -0.95
LSM5-203ENST00000409782 TIMMDC1Q9NPL8 285 aa9.09□□□□□ -0.95
LSM5-203ENST00000409782 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.95
LSM5-203ENST00000409782 DUOX2Q9NRD8 1548 aa9.09□□□□□ -0.95
LSM5-203ENST00000409782 ABCC5O15440 1437 aa9.08□□□□□ -0.96
LSM5-203ENST00000409782 DAPK1P53355 1430 aa9.08□□□□□ -0.96
LSM5-203ENST00000409782 SLC35F4A4IF30 521 aa9.08□□□□□ -0.96
LSM5-203ENST00000409782 PPFIA3O75145 1194 aa9.08□□□□□ -0.96
LSM5-203ENST00000409782 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
LSM5-203ENST00000409782 EPHA4P54764 986 aa9.08□□□□□ -0.96
LSM5-203ENST00000409782 FMR1Q06787 632 aaKnown RBP eCLIP9.08□□□□□ -0.96
LSM5-203ENST00000409782 DRC1Q96MC2 740 aa9.08□□□□□ -0.96
LSM5-203ENST00000409782 NIFKQ9BYG3 293 aaKnown RBP9.08□□□□□ -0.96
LSM5-203ENST00000409782 SCHIP1Q9P0W5 487 aaPredicted RBP9.08□□□□□ -0.96
LSM5-203ENST00000409782 ZMYM3Q14202 1370 aa9.08□□□□□ -0.96
LSM5-203ENST00000409782 ZNF142P52746 1687 aaPredicted RBP9.07□□□□□ -0.96
LSM5-203ENST00000409782 ZC3H13Q5T200 1668 aaKnown RBP9.07□□□□□ -0.96
LSM5-203ENST00000409782 PTPRKQ15262 1439 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 ERBINQ96RT1 1412 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 MYO3AQ8NEV4 1616 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 TREHO43280 583 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 NDUFB5O43674 189 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 PHKA2P46019 1235 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 CEBPAP49715 358 aaPredicted RBP9.07□□□□□ -0.96
LSM5-203ENST00000409782 CAPN12Q6ZSI9 719 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 TNS4Q8IZW8 715 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 DYRK1BQ9Y463 629 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 KIF15Q9NS87 1388 aa9.07□□□□□ -0.96
LSM5-203ENST00000409782 SENP3-EIF4A1A0A087X0R7 540 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 H3BM21 787 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 VEGFBP49765 207 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 TAGLNQ01995 201 aaKnown RBP9.06□□□□□ -0.96
LSM5-203ENST00000409782 MTMR3Q13615 1198 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 C4orf17Q53FE4 359 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 ALKBH2Q6NS38 261 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 GGT6Q6P531 493 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
LSM5-203ENST00000409782 PZPP20742 1482 aa9.06□□□□□ -0.96
LSM5-203ENST00000409782 PRDM15P57071 1507 aaPredicted RBP9.05□□□□□ -0.96
LSM5-203ENST00000409782 MROH1Q8NDA8 1641 aa9.05□□□□□ -0.96
LSM5-203ENST00000409782 ADGRL2O95490 1459 aa9.05□□□□□ -0.96
LSM5-203ENST00000409782 KIF3BO15066 747 aa9.05□□□□□ -0.96
LSM5-203ENST00000409782 WFS1O76024 890 aa9.05□□□□□ -0.96
LSM5-203ENST00000409782 P4HBP07237 508 aaKnown RBP9.05□□□□□ -0.96
LSM5-203ENST00000409782 ITGA6P23229 1130 aa9.05□□□□□ -0.96
LSM5-203ENST00000409782 DMRTB1Q96MA1 342 aa9.05□□□□□ -0.96
LSM5-203ENST00000409782 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
LSM5-203ENST00000409782 ABCC3O15438 1527 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms