RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 AACSQ86V21 672 aa15.32■□□□□ 0.04
CHMP3-204ENST00000409727 TTLL11Q8NHH1 800 aa15.32■□□□□ 0.04
CHMP3-204ENST00000409727 GREM2Q9H772 168 aa15.32■□□□□ 0.04
CHMP3-204ENST00000409727 C4AP0C0L4 1744 aa15.32■□□□□ 0.04
CHMP3-204ENST00000409727 USP42Q9H9J4 1324 aaKnown RBP15.32■□□□□ 0.04
CHMP3-204ENST00000409727 CSF1RP07333 972 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 GTF2E1P29083 439 aaPredicted RBP15.31■□□□□ 0.04
CHMP3-204ENST00000409727 TFCP2Q12800 502 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 SETDB2Q96T68 719 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 SALL3Q9BXA9 1300 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 SEC24BO95487 1268 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 IFIT2P09913 472 aaKnown RBP15.31■□□□□ 0.04
CHMP3-204ENST00000409727 ITGA6P23229 1130 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 ERFEQ4G0M1 354 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 PUS3Q9BZE2 481 aaKnown RBP15.31■□□□□ 0.04
CHMP3-204ENST00000409727 TFCP2L1Q9NZI6 479 aa15.31■□□□□ 0.04
CHMP3-204ENST00000409727 ZNF827Q17R98 1081 aa15.3■□□□□ 0.04
CHMP3-204ENST00000409727 CCDC8Q9H0W5 538 aaPredicted RBP15.3■□□□□ 0.04
CHMP3-204ENST00000409727 TNS1Q9HBL0 1735 aaKnown RBP15.3■□□□□ 0.04
CHMP3-204ENST00000409727 UBR3Q6ZT12 1888 aa15.3■□□□□ 0.04
CHMP3-204ENST00000409727 NBPF5PQ86XG9 351 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-204ENST00000409727 CCDC24Q8N4L8 307 aa15.29■□□□□ 0.04
CHMP3-204ENST00000409727 EAF2Q96CJ1 260 aaPredicted RBP15.29■□□□□ 0.04
CHMP3-204ENST00000409727 OSBPL3Q9H4L5 887 aa15.29■□□□□ 0.04
CHMP3-204ENST00000409727 ANKRD18BA2A2Z9 1011 aa15.29■□□□□ 0.04
CHMP3-204ENST00000409727 EYA2O00167 538 aa15.29■□□□□ 0.04
CHMP3-204ENST00000409727 NPHP1O15259 732 aa15.29■□□□□ 0.04
CHMP3-204ENST00000409727 SDSP20132 328 aa15.29■□□□□ 0.04
CHMP3-204ENST00000409727 ATG9AQ7Z3C6 839 aa15.29■□□□□ 0.04
CHMP3-204ENST00000409727 TLR7Q9NYK1 1049 aaKnown RBP15.29■□□□□ 0.04
CHMP3-204ENST00000409727 MAP4K4O95819 1239 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-204ENST00000409727 SSFA2P28290 1259 aa15.28■□□□□ 0.04
CHMP3-204ENST00000409727 EN1Q05925 392 aaPredicted RBP15.28■□□□□ 0.04
CHMP3-204ENST00000409727 STAP2Q9UGK3 403 aa15.28■□□□□ 0.04
CHMP3-204ENST00000409727 MYH3P11055 1940 aa15.28■□□□□ 0.04
CHMP3-204ENST00000409727 TRIM6-TRIM34B2RNG4 842 aa15.27■□□□□ 0.04
CHMP3-204ENST00000409727 RGL2O15211 777 aa15.27■□□□□ 0.04
CHMP3-204ENST00000409727 DDX60Q8IY21 1712 aaKnown RBP15.27■□□□□ 0.03
CHMP3-204ENST00000409727 IL15P40933 162 aaPredicted RBP15.27■□□□□ 0.03
CHMP3-204ENST00000409727 NFIXQ14938 502 aa15.27■□□□□ 0.03
CHMP3-204ENST00000409727 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.03
CHMP3-204ENST00000409727 TNNI3KQ59H18 835 aa15.27■□□□□ 0.03
CHMP3-204ENST00000409727 RILPL2Q969X0 211 aa15.27■□□□□ 0.03
CHMP3-204ENST00000409727 SEC31BQ9NQW1 1179 aa15.27■□□□□ 0.03
CHMP3-204ENST00000409727 FPGT-TNNI3KV9GXZ4 949 aa15.27■□□□□ 0.03
CHMP3-204ENST00000409727 GYS1P13807 737 aa15.26■□□□□ 0.03
CHMP3-204ENST00000409727 LDHAL6AQ6ZMR3 332 aa15.26■□□□□ 0.03
CHMP3-204ENST00000409727 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
CHMP3-204ENST00000409727 PI4K2BQ8TCG2 481 aa15.26■□□□□ 0.03
CHMP3-204ENST00000409727 GPATCH3Q96I76 525 aa15.26■□□□□ 0.03
CHMP3-204ENST00000409727 ABCC12Q96J65 1359 aa15.26■□□□□ 0.03
CHMP3-204ENST00000409727 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
CHMP3-204ENST00000409727 CIAO1O76071 339 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 HSP90B1P14625 803 aaKnown RBP15.25■□□□□ 0.03
CHMP3-204ENST00000409727 MFAP1P55081 439 aaKnown RBP15.25■□□□□ 0.03
CHMP3-204ENST00000409727 CCDC152Q4G0S7 254 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 TPTE2Q6XPS3 522 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 TBC1D9Q6ZT07 1266 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 NEUROD6Q96NK8 337 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 CNNM1Q9NRU3 951 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 AOX1Q06278 1338 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 CDC45O75419 566 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 ILDR1Q86SU0 546 aaPredicted RBP15.25■□□□□ 0.03
CHMP3-204ENST00000409727 ECHDC1Q9NTX5 307 aa15.25■□□□□ 0.03
CHMP3-204ENST00000409727 CARMIL3Q8ND23 1372 aa15.24■□□□□ 0.03
CHMP3-204ENST00000409727 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
CHMP3-204ENST00000409727 HMGB2P26583 209 aaKnown RBP15.24■□□□□ 0.03
CHMP3-204ENST00000409727 SF3B2Q13435 895 aaKnown RBP15.24■□□□□ 0.03
CHMP3-204ENST00000409727 CEP126Q9P2H0 1117 aa15.24■□□□□ 0.03
CHMP3-204ENST00000409727 COL24A1Q17RW2 1714 aa15.23■□□□□ 0.03
CHMP3-204ENST00000409727 TIMM10P62072 90 aa15.23■□□□□ 0.03
CHMP3-204ENST00000409727 METTL24Q5JXM2 366 aa15.23■□□□□ 0.03
CHMP3-204ENST00000409727 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
CHMP3-204ENST00000409727 DBNDD2Q9BQY9 259 aa15.23■□□□□ 0.03
CHMP3-204ENST00000409727 DBNLQ9UJU6 430 aaKnown RBP15.23■□□□□ 0.03
CHMP3-204ENST00000409727 LAMB2P55268 1798 aa15.23■□□□□ 0.03
CHMP3-204ENST00000409727 ERC2O15083 957 aa15.23■□□□□ 0.03
CHMP3-204ENST00000409727 CAMKK2Q96RR4 588 aa15.23■□□□□ 0.03
CHMP3-204ENST00000409727 GLRX3O76003 335 aaKnown RBP15.22■□□□□ 0.03
CHMP3-204ENST00000409727 DEFB132Q7Z7B7 95 aa15.22■□□□□ 0.03
CHMP3-204ENST00000409727 CNBD1Q8NA66 436 aa15.22■□□□□ 0.03
CHMP3-204ENST00000409727 MPHOSPH8Q99549 860 aa15.22■□□□□ 0.03
CHMP3-204ENST00000409727 UPF2Q9HAU5 1272 aaKnown RBP15.22■□□□□ 0.03
CHMP3-204ENST00000409727 RIPOR2Q9Y4F9 1068 aa15.22■□□□□ 0.03
CHMP3-204ENST00000409727 SLC10A5Q5PT55 438 aa15.21■□□□□ 0.03
CHMP3-204ENST00000409727 NLRP3Q96P20 1036 aa15.21■□□□□ 0.03
CHMP3-204ENST00000409727 BOLA2Q9H3K6 86 aa15.21■□□□□ 0.03
CHMP3-204ENST00000409727 FBXO3Q9UK99 471 aa15.21■□□□□ 0.03
CHMP3-204ENST00000409727 A0A1B0GUL7 405 aa15.2■□□□□ 0.02
CHMP3-204ENST00000409727 IGHMBP2P38935 993 aaKnown RBP15.2■□□□□ 0.02
CHMP3-204ENST00000409727 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
CHMP3-204ENST00000409727 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-204ENST00000409727 ANO8Q9HCE9 1232 aaPredicted RBP15.2■□□□□ 0.02
CHMP3-204ENST00000409727 RIC1Q4ADV7 1423 aa15.2■□□□□ 0.02
CHMP3-204ENST00000409727 TUBGCP6Q96RT7 1819 aa15.2■□□□□ 0.02
CHMP3-204ENST00000409727 ZNF609O15014 1411 aa15.2■□□□□ 0.02
CHMP3-204ENST00000409727 ANP32AP39687 249 aaKnown RBP15.2■□□□□ 0.02
CHMP3-204ENST00000409727 RGPD3A6NKT7 1758 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms