RNA–Protein interactions for RNA: ENST00000409118.2

SGPL1-203, Transcript of sphingosine-1-phosphate lyase 1, humanhuman

TSL 2

Gene SGPL1, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPL1-203ENST00000409118 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
SGPL1-203ENST00000409118 PDE8AO60658 829 aa17.13■□□□□ 0.33
SGPL1-203ENST00000409118 ZKSCAN2Q63HK3 967 aa17.13■□□□□ 0.33
SGPL1-203ENST00000409118 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
SGPL1-203ENST00000409118 UBE3BQ7Z3V4 1068 aa17.13■□□□□ 0.33
SGPL1-203ENST00000409118 H7C1W4 665 aa17.12■□□□□ 0.33
SGPL1-203ENST00000409118 GRM8O00222 908 aa17.12■□□□□ 0.33
SGPL1-203ENST00000409118 DDX46Q7L014 1031 aaKnown RBP17.12■□□□□ 0.33
SGPL1-203ENST00000409118 DLEC1Q9Y238 1755 aa17.11■□□□□ 0.33
SGPL1-203ENST00000409118 YBX3P16989 372 aaKnown RBP eCLIP17.11■□□□□ 0.33
SGPL1-203ENST00000409118 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
SGPL1-203ENST00000409118 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
SGPL1-203ENST00000409118 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
SGPL1-203ENST00000409118 TNRC6CQ9HCJ0 1690 aaKnown RBP17.1■□□□□ 0.33
SGPL1-203ENST00000409118 TRIM27P14373 513 aa17.1■□□□□ 0.33
SGPL1-203ENST00000409118 SF3B3Q15393 1217 aaKnown RBP17.1■□□□□ 0.33
SGPL1-203ENST00000409118 CCDC152Q4G0S7 254 aa17.1■□□□□ 0.33
SGPL1-203ENST00000409118 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
SGPL1-203ENST00000409118 FTSJ3Q8IY81 847 aaKnown RBP17.1■□□□□ 0.33
SGPL1-203ENST00000409118 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
SGPL1-203ENST00000409118 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
SGPL1-203ENST00000409118 MS4A1P11836 297 aa17.09■□□□□ 0.33
SGPL1-203ENST00000409118 CTSWP56202 376 aa17.09■□□□□ 0.33
SGPL1-203ENST00000409118 SOGA3Q5TF21 947 aa17.09■□□□□ 0.33
SGPL1-203ENST00000409118 C3orf67Q6ZVT6 689 aa17.09■□□□□ 0.33
SGPL1-203ENST00000409118 BRCA1P38398 1863 aaKnown RBP17.08■□□□□ 0.33
SGPL1-203ENST00000409118 ABCC4O15439 1325 aa17.08■□□□□ 0.32
SGPL1-203ENST00000409118 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.08■□□□□ 0.32
SGPL1-203ENST00000409118 PLA2G12BQ9BX93 195 aa17.08■□□□□ 0.32
SGPL1-203ENST00000409118 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.32
SGPL1-203ENST00000409118 LAMB2P55268 1798 aa17.07■□□□□ 0.32
SGPL1-203ENST00000409118 DDX60Q8IY21 1712 aaKnown RBP17.07■□□□□ 0.32
SGPL1-203ENST00000409118 BBOX1O75936 387 aa17.07■□□□□ 0.32
SGPL1-203ENST00000409118 CASP7P55210 303 aa17.07■□□□□ 0.32
SGPL1-203ENST00000409118 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
SGPL1-203ENST00000409118 CLUAP1Q96AJ1 413 aa17.07■□□□□ 0.32
SGPL1-203ENST00000409118 UTYO14607 1347 aa17.06■□□□□ 0.32
SGPL1-203ENST00000409118 C21orf2O43822 256 aa17.06■□□□□ 0.32
SGPL1-203ENST00000409118 GRAPQ13588 217 aa17.06■□□□□ 0.32
SGPL1-203ENST00000409118 ARHGAP27Q6ZUM4 889 aa17.06■□□□□ 0.32
SGPL1-203ENST00000409118 TMC4Q7Z404 712 aa17.06■□□□□ 0.32
SGPL1-203ENST00000409118 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
SGPL1-203ENST00000409118 GRAPLQ8TC17 118 aaPredicted RBP17.06■□□□□ 0.32
SGPL1-203ENST00000409118 PPEF1O14829 653 aaPredicted RBP17.05■□□□□ 0.32
SGPL1-203ENST00000409118 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
SGPL1-203ENST00000409118 CC2D2BQ6DHV5 1058 aa17.05■□□□□ 0.32
SGPL1-203ENST00000409118 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
SGPL1-203ENST00000409118 CDC5LQ99459 802 aaKnown RBP17.05■□□□□ 0.32
SGPL1-203ENST00000409118 NBPF7P0C2Y1 421 aaPredicted RBP17.04■□□□□ 0.32
SGPL1-203ENST00000409118 UBTFL1P0CB47 393 aaPredicted RBP17.04■□□□□ 0.32
SGPL1-203ENST00000409118 GRIPAP1Q4V328 841 aa17.04■□□□□ 0.32
SGPL1-203ENST00000409118 CCDC93Q567U6 631 aa17.04■□□□□ 0.32
SGPL1-203ENST00000409118 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
SGPL1-203ENST00000409118 ARFGEF1Q9Y6D6 1849 aa17.04■□□□□ 0.32
SGPL1-203ENST00000409118 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
SGPL1-203ENST00000409118 GNAI3P08754 354 aa17.03■□□□□ 0.32
SGPL1-203ENST00000409118 RTKN2Q8IZC4 609 aa17.03■□□□□ 0.32
SGPL1-203ENST00000409118 CCDC85AQ96PX6 553 aaPredicted RBP17.03■□□□□ 0.32
SGPL1-203ENST00000409118 CHMP3Q9Y3E7 222 aa17.03■□□□□ 0.32
SGPL1-203ENST00000409118 CSF1RP07333 972 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 RPS8P62241 208 aaKnown RBP17.02■□□□□ 0.32
SGPL1-203ENST00000409118 FOXO4P98177 505 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 ANKRD18AQ8IVF6 992 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 ITPRIPQ8IWB1 547 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 C7orf43Q8WVR3 580 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 SUCLG2Q96I99 432 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 GREM2Q9H772 168 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
SGPL1-203ENST00000409118 SLX4Q8IY92 1834 aa17.02■□□□□ 0.31
SGPL1-203ENST00000409118 IFIT5Q13325 482 aaKnown RBP17.01■□□□□ 0.31
SGPL1-203ENST00000409118 CCDC57Q2TAC2 916 aa17.01■□□□□ 0.31
SGPL1-203ENST00000409118 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
SGPL1-203ENST00000409118 SP8Q8IXZ3 490 aa17.01■□□□□ 0.31
SGPL1-203ENST00000409118 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
SGPL1-203ENST00000409118 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
SGPL1-203ENST00000409118 TNNQ9UQP3 1299 aa17.01■□□□□ 0.31
SGPL1-203ENST00000409118 MYH3P11055 1940 aa17■□□□□ 0.31
SGPL1-203ENST00000409118 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
SGPL1-203ENST00000409118 ITGA6P23229 1130 aa17■□□□□ 0.31
SGPL1-203ENST00000409118 IGHMBP2P38935 993 aaKnown RBP17■□□□□ 0.31
SGPL1-203ENST00000409118 CACNA1SQ13698 1873 aa17■□□□□ 0.31
SGPL1-203ENST00000409118 FAM161AQ3B820 660 aa17■□□□□ 0.31
SGPL1-203ENST00000409118 CELF1Q92879 486 aaKnown RBP17■□□□□ 0.31
SGPL1-203ENST00000409118 BICC1Q9H694 974 aaKnown RBP17■□□□□ 0.31
SGPL1-203ENST00000409118 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
SGPL1-203ENST00000409118 MEIS3Q99687 375 aa16.99■□□□□ 0.31
SGPL1-203ENST00000409118 TAOK3Q9H2K8 898 aa16.99■□□□□ 0.31
SGPL1-203ENST00000409118 LTBP3Q9NS15 1303 aa16.98■□□□□ 0.31
SGPL1-203ENST00000409118 PLIN1O60240 522 aa16.98■□□□□ 0.31
SGPL1-203ENST00000409118 PDE3AQ14432 1141 aa16.98■□□□□ 0.31
SGPL1-203ENST00000409118 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
SGPL1-203ENST00000409118 MPHOSPH8Q99549 860 aa16.98■□□□□ 0.31
SGPL1-203ENST00000409118 CHMP4BQ9H444 224 aaKnown RBP16.98■□□□□ 0.31
SGPL1-203ENST00000409118 RLBP1P12271 317 aa16.97■□□□□ 0.31
SGPL1-203ENST00000409118 FKBP4Q02790 459 aaKnown RBP eCLIP16.97■□□□□ 0.31
SGPL1-203ENST00000409118 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
SGPL1-203ENST00000409118 SUPT20HQ8NEM7 779 aa16.97■□□□□ 0.31
SGPL1-203ENST00000409118 PANK1Q8TE04 598 aa16.97■□□□□ 0.31
SGPL1-203ENST00000409118 KAZALD1Q96I82 304 aa16.97■□□□□ 0.31
SGPL1-203ENST00000409118 BSDC1Q9NW68 430 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms